RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 DRP2Q13474 957 aa17.82■□□□□ 0.44
SH3RF1-201ENST00000284637 RIOK1Q9BRS2 568 aaKnown RBP17.82■□□□□ 0.44
SH3RF1-201ENST00000284637 AMNQ9BXJ7 453 aa17.82■□□□□ 0.44
SH3RF1-201ENST00000284637 DNAJC17Q9NVM6 304 aaKnown RBP17.82■□□□□ 0.44
SH3RF1-201ENST00000284637 SYNMO15061 1565 aa17.82■□□□□ 0.44
SH3RF1-201ENST00000284637 PIK3CAP42336 1068 aa17.82■□□□□ 0.44
SH3RF1-201ENST00000284637 FOSP01100 380 aaPredicted RBP17.82■□□□□ 0.44
SH3RF1-201ENST00000284637 LMNB2Q03252 620 aa17.82■□□□□ 0.44
SH3RF1-201ENST00000284637 NOD1Q9Y239 953 aa17.82■□□□□ 0.44
SH3RF1-201ENST00000284637 IVNS1ABPQ9Y6Y0 642 aa17.82■□□□□ 0.44
SH3RF1-201ENST00000284637 GCFC2P16383 781 aaKnown RBP17.82■□□□□ 0.44
SH3RF1-201ENST00000284637 CUL4BQ13620 913 aa17.82■□□□□ 0.44
SH3RF1-201ENST00000284637 PTCH1Q13635 1447 aa17.82■□□□□ 0.44
SH3RF1-201ENST00000284637 USP17L2Q6R6M4 530 aa17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 ARHGEF25Q86VW2 580 aa17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 FMR1NBQ8N0W7 255 aaPredicted RBP17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 NME8Q8N427 588 aa17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 PIH1D3Q9NQM4 214 aaKnown RBP17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 PCDHB4Q9Y5E5 795 aa17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 DR1Q01658 176 aa17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 ZBTB8OSQ8IWT0 167 aa17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 LRRC43Q8N309 656 aa17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 CENPKQ9BS16 269 aa17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 KDM6BO15054 1643 aa17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 TMEM2Q9UHN6 1383 aa17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 TMED1Q13445 227 aa17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 ALKBH5Q6P6C2 394 aaKnown RBP17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 MLXIPQ9HAP2 919 aa17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 PLAAQ9Y263 795 aa17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 ZBTB1Q9Y2K1 713 aa17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 TRIM49BA6NDI0 452 aa17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 CAPN9O14815 690 aa17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 RFX6Q8HWS3 928 aa17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 COG1Q8WTW3 980 aa17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 OSBPL9Q96SU4 736 aa17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 NACA2Q9H009 215 aa17.81■□□□□ 0.44
SH3RF1-201ENST00000284637 SYNJ2BP-COX16A0A087WUM0 186 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 WDR91A4D1P6 747 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 PLEKHA8P1O95397 391 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 GSTA1P08263 222 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 GSTA2P09210 222 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 BPIFB4P59827 614 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 HVCN1Q96D96 273 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 ZMYND12Q9H0C1 365 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 UBE2TQ9NPD8 197 aaPredicted RBP17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 ABHD10Q9NUJ1 306 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 COX16Q9P0S2 106 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 TCP10L2B9ZVM9 353 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 PTPREP23469 700 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 EIF3BP55884 814 aaKnown RBP17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 ZNF449Q6P9G9 518 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 DISC1Q9NRI5 854 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 HESX1Q9UBX0 185 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 MAP3K7O43318 606 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 DYNLT1P63172 113 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 SMYD2Q9NRG4 433 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 MLH3Q9UHC1 1453 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 GMNCA6NCL1 334 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 ASPHQ12797 758 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 ASPRV1Q53RT3 343 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 DCLK2Q8N568 766 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 DYNLL2Q96FJ2 89 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 ELAC2Q9BQ52 826 aaKnown RBP17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 VIPAS39Q9H9C1 493 aa17.8■□□□□ 0.44
SH3RF1-201ENST00000284637 MMEL1Q495T6 779 aa17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 GPATCH4Q5T3I0 446 aaKnown RBP17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 NUGGCQ68CJ6 796 aa17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 SLC30A9Q6PML9 568 aa17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 RASSF10A6NK89 507 aa17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 PPIP5K2O43314 1243 aa17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 FGGP02679 453 aa17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 ATP2B4P23634 1241 aa17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 POLGP54098 1239 aaPredicted RBP17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 BRDTQ58F21 947 aaPredicted RBP17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 KRT26Q7Z3Y9 468 aa17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 CDKL2Q92772 493 aa17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 PPP1R12AO14974 1030 aaPredicted RBP17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 ACSL3O95573 720 aa17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 USP17L8P0C7I0 530 aa17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 MSH2P43246 934 aa17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 TMTC3Q6ZXV5 915 aa17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 NLRP14Q86W24 1093 aa17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 KIF2CQ99661 725 aa17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 BPIFA3Q9BQP9 254 aa17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 ATP10AO60312 1499 aa17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 GOLGA8SH3BPF8 625 aa17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 HNRNPH1P31943 449 aaKnown RBP17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 PDCD2Q16342 344 aaPredicted RBP17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 IFT122Q9HBG6 1241 aa17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 DONSONQ9NYP3 566 aa17.79■□□□□ 0.44
SH3RF1-201ENST00000284637 GAP43P17677 238 aa17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 GLE1Q53GS7 698 aaKnown RBP17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 GPC4O75487 556 aa17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 THOC1Q96FV9 657 aaKnown RBP17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 EXOC1LA0A1B0GW35 172 aa17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 CFAP73A6NFT4 308 aa17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 H0YCG3 227 aa17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 PLA2G4BP0C869 781 aa17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 ABCB5Q2M3G0 1257 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms