RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 ASTE1Q2TB18 679 aaPredicted RBP27.74■■■□□ 2.03
ROM1-201ENST00000278833 PPP4R3CPQ6ZMV5 832 aa27.74■■■□□ 2.03
ROM1-201ENST00000278833 CCDC65Q8IXS2 484 aa27.74■■■□□ 2.03
ROM1-201ENST00000278833 EXOC4Q96A65 974 aa27.74■■■□□ 2.03
ROM1-201ENST00000278833 RHOXF2Q9BQY4 288 aa27.74■■■□□ 2.03
ROM1-201ENST00000278833 F8W031 263 aaPredicted RBP27.74■■■□□ 2.03
ROM1-201ENST00000278833 RBAK-RBAKDNI3L0D1 243 aa27.74■■■□□ 2.03
ROM1-201ENST00000278833 EPHB6O15197 1021 aa27.74■■■□□ 2.03
ROM1-201ENST00000278833 CRKP46108 304 aa27.74■■■□□ 2.03
ROM1-201ENST00000278833 QRICH1Q2TAL8 776 aa27.74■■■□□ 2.03
ROM1-201ENST00000278833 MMS19Q96T76 1030 aa27.74■■■□□ 2.03
ROM1-201ENST00000278833 KANSL2Q9H9L4 492 aa27.74■■■□□ 2.03
ROM1-201ENST00000278833 PANK4Q9NVE7 773 aa27.74■■■□□ 2.03
ROM1-201ENST00000278833 PCDHA13Q9Y5I0 950 aa27.74■■■□□ 2.03
ROM1-201ENST00000278833 TACC1O75410 805 aa27.73■■■□□ 2.03
ROM1-201ENST00000278833 MMP14P50281 582 aa27.73■■■□□ 2.03
ROM1-201ENST00000278833 MAP9Q49MG5 647 aa27.73■■■□□ 2.03
ROM1-201ENST00000278833 EEF2KMTQ96G04 330 aa27.73■■■□□ 2.03
ROM1-201ENST00000278833 ANO3Q9BYT9 981 aa27.73■■■□□ 2.03
ROM1-201ENST00000278833 IFIH1Q9BYX4 1025 aaKnown RBP27.73■■■□□ 2.03
ROM1-201ENST00000278833 ACBD3Q9H3P7 528 aa27.73■■■□□ 2.03
ROM1-201ENST00000278833 CEP72Q9P209 647 aa27.73■■■□□ 2.03
ROM1-201ENST00000278833 HDAC6Q9UBN7 1215 aa27.73■■■□□ 2.03
ROM1-201ENST00000278833 H3BQF6 201 aa27.72■■■□□ 2.03
ROM1-201ENST00000278833 GRIN3BO60391 1043 aa27.72■■■□□ 2.03
ROM1-201ENST00000278833 NEK11Q8NG66 645 aa27.72■■■□□ 2.03
ROM1-201ENST00000278833 DCAF8L1A6NGE4 600 aa27.72■■■□□ 2.03
ROM1-201ENST00000278833 ENC1O14682 589 aa27.72■■■□□ 2.03
ROM1-201ENST00000278833 CASP8Q14790 479 aa27.72■■■□□ 2.03
ROM1-201ENST00000278833 EDRF1Q3B7T1 1238 aa27.72■■■□□ 2.03
ROM1-201ENST00000278833 TATDN1Q6P1N9 297 aa27.72■■■□□ 2.03
ROM1-201ENST00000278833 KCTD1Q719H9 257 aa27.72■■■□□ 2.03
ROM1-201ENST00000278833 CCDC155Q8N6L0 562 aa27.72■■■□□ 2.03
ROM1-201ENST00000278833 SNX12Q9UMY4 172 aa27.72■■■□□ 2.03
ROM1-201ENST00000278833 SLC16A2P36021 539 aa27.71■■■□□ 2.03
ROM1-201ENST00000278833 NFIAQ12857 509 aa27.71■■■□□ 2.03
ROM1-201ENST00000278833 HAUS3Q68CZ6 603 aa27.71■■■□□ 2.03
ROM1-201ENST00000278833 KCTD17Q8N5Z5 321 aa27.71■■■□□ 2.03
ROM1-201ENST00000278833 GMCL1P1Q8NEA9 526 aa27.71■■■□□ 2.03
ROM1-201ENST00000278833 FAM184BQ9ULE4 1060 aa27.71■■■□□ 2.03
ROM1-201ENST00000278833 SYNPO2Q9UMS6 1093 aa27.71■■■□□ 2.03
ROM1-201ENST00000278833 TFR2Q9UP52 801 aa27.71■■■□□ 2.03
ROM1-201ENST00000278833 LRRC53A6NM62 1247 aa27.7■■■□□ 2.03
ROM1-201ENST00000278833 POLR3GO15318 223 aaPredicted RBP27.7■■■□□ 2.03
ROM1-201ENST00000278833 PLA2G4BP0C869 781 aa27.7■■■□□ 2.03
ROM1-201ENST00000278833 EIF4A3P38919 411 aaKnown RBP27.7■■■□□ 2.03
ROM1-201ENST00000278833 KCNMA1Q12791 1236 aa27.7■■■□□ 2.03
ROM1-201ENST00000278833 Q4G0T1 1027 aa27.7■■■□□ 2.03
ROM1-201ENST00000278833 TRIM59Q8IWR1 403 aa27.7■■■□□ 2.03
ROM1-201ENST00000278833 MMRN2Q9H8L6 949 aa27.7■■■□□ 2.03
ROM1-201ENST00000278833 FAM207AQ9NSI2 230 aaPredicted RBP27.7■■■□□ 2.03
ROM1-201ENST00000278833 PI4KBQ9UBF8 816 aa27.7■■■□□ 2.03
ROM1-201ENST00000278833 MPHOSPH10O00566 681 aaKnown RBP27.7■■■□□ 2.02
ROM1-201ENST00000278833 SCNN1DP51172 638 aa27.7■■■□□ 2.02
ROM1-201ENST00000278833 CYP27A1Q02318 531 aa27.7■■■□□ 2.02
ROM1-201ENST00000278833 CDC37Q16543 378 aaPredicted RBP27.7■■■□□ 2.02
ROM1-201ENST00000278833 MMGT1Q8N4V1 131 aa27.7■■■□□ 2.02
ROM1-201ENST00000278833 GMCL1Q96IK5 515 aa27.7■■■□□ 2.02
ROM1-201ENST00000278833 KCTD10Q9H3F6 313 aa27.7■■■□□ 2.02
ROM1-201ENST00000278833 MARCH6O60337 910 aa27.69■■■□□ 2.02
ROM1-201ENST00000278833 PLEKP08567 350 aaPredicted RBP27.69■■■□□ 2.02
ROM1-201ENST00000278833 CYP11B2P19099 503 aa27.69■■■□□ 2.02
ROM1-201ENST00000278833 SLFN13Q68D06 897 aa27.69■■■□□ 2.02
ROM1-201ENST00000278833 RNF10Q8N5U6 811 aaKnown RBP27.69■■■□□ 2.02
ROM1-201ENST00000278833 ETNPPLQ8TBG4 499 aa27.69■■■□□ 2.02
ROM1-201ENST00000278833 MED4Q9NPJ6 270 aa27.69■■■□□ 2.02
ROM1-201ENST00000278833 EEF2P13639 858 aaKnown RBP27.68■■■□□ 2.02
ROM1-201ENST00000278833 AARSP49588 968 aaKnown RBP eCLIP27.68■■■□□ 2.02
ROM1-201ENST00000278833 SPIRE1Q08AE8 756 aa27.68■■■□□ 2.02
ROM1-201ENST00000278833 STRIP1Q5VSL9 837 aa27.68■■■□□ 2.02
ROM1-201ENST00000278833 HGSNATQ68CP4 663 aa27.68■■■□□ 2.02
ROM1-201ENST00000278833 CC2D2BQ6DHV5 1058 aa27.68■■■□□ 2.02
ROM1-201ENST00000278833 TMEM179Q6ZVK1 233 aa27.68■■■□□ 2.02
ROM1-201ENST00000278833 GLIS3Q8NEA6 775 aa27.68■■■□□ 2.02
ROM1-201ENST00000278833 FAM71BQ8TC56 605 aa27.68■■■□□ 2.02
ROM1-201ENST00000278833 ALS2CR12Q96Q35 445 aa27.68■■■□□ 2.02
ROM1-201ENST00000278833 MXD3Q9BW11 206 aa27.68■■■□□ 2.02
ROM1-201ENST00000278833 TMX4Q9H1E5 349 aaPredicted RBP27.68■■■□□ 2.02
ROM1-201ENST00000278833 PCDHA1Q9Y5I3 950 aa27.68■■■□□ 2.02
ROM1-201ENST00000278833 ATRNL1Q5VV63 1379 aa27.68■■■□□ 2.02
ROM1-201ENST00000278833 MEIS2O14770 477 aa27.68■■■□□ 2.02
ROM1-201ENST00000278833 FOSP01100 380 aaPredicted RBP27.68■■■□□ 2.02
ROM1-201ENST00000278833 TCP1P17987 556 aaKnown RBP27.68■■■□□ 2.02
ROM1-201ENST00000278833 SLC1A4P43007 532 aa27.68■■■□□ 2.02
ROM1-201ENST00000278833 SLC12A3P55017 1021 aa27.68■■■□□ 2.02
ROM1-201ENST00000278833 DOK7Q18PE1 504 aa27.68■■■□□ 2.02
ROM1-201ENST00000278833 RRAGAQ7L523 313 aa27.68■■■□□ 2.02
ROM1-201ENST00000278833 PDE11AQ9HCR9 933 aa27.68■■■□□ 2.02
ROM1-201ENST00000278833 NFKBIEO00221 500 aa27.67■■■□□ 2.02
ROM1-201ENST00000278833 LRRC41Q15345 812 aa27.67■■■□□ 2.02
ROM1-201ENST00000278833 CERKLQ49MI3 558 aaPredicted RBP27.67■■■□□ 2.02
ROM1-201ENST00000278833 KRT26Q7Z3Y9 468 aa27.67■■■□□ 2.02
ROM1-201ENST00000278833 DEF6Q9H4E7 631 aa27.67■■■□□ 2.02
ROM1-201ENST00000278833 KIAA1024Q9UPX6 916 aa27.67■■■□□ 2.02
ROM1-201ENST00000278833 DUSP10Q9Y6W6 482 aa27.67■■■□□ 2.02
ROM1-201ENST00000278833 SCN9AQ15858 1988 aa27.67■■■□□ 2.02
ROM1-201ENST00000278833 AKR1B10O60218 316 aa27.66■■■□□ 2.02
ROM1-201ENST00000278833 CIITAP33076 1130 aa27.66■■■□□ 2.02
ROM1-201ENST00000278833 CCDC40Q4G0X9 1142 aa27.66■■■□□ 2.02
ROM1-201ENST00000278833 GPBP1Q86WP2 473 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms