RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 FXR2P51116 673 aaKnown RBP eCLIP18.79■□□□□ 0.6
SPG7-201ENST00000268704 TMEM266Q2M3C6 531 aa18.79■□□□□ 0.6
SPG7-201ENST00000268704 MYOCDQ8IZQ8 938 aa18.79■□□□□ 0.6
SPG7-201ENST00000268704 RUBCNQ92622 972 aa18.79■□□□□ 0.6
SPG7-201ENST00000268704 SETDB2Q96T68 719 aa18.79■□□□□ 0.6
SPG7-201ENST00000268704 TSG101Q99816 390 aa18.79■□□□□ 0.6
SPG7-201ENST00000268704 SBF2Q86WG5 1849 aa18.79■□□□□ 0.6
SPG7-201ENST00000268704 FGFR1OPO95684 399 aaKnown RBP18.79■□□□□ 0.6
SPG7-201ENST00000268704 SKOR1P84550 965 aa18.79■□□□□ 0.6
SPG7-201ENST00000268704 KIAA0753Q2KHM9 967 aa18.79■□□□□ 0.6
SPG7-201ENST00000268704 KRT79Q5XKE5 535 aa18.79■□□□□ 0.6
SPG7-201ENST00000268704 IQCKQ8N0W5 287 aa18.79■□□□□ 0.6
SPG7-201ENST00000268704 RTFDC1Q9BY42 306 aaPredicted RBP18.79■□□□□ 0.6
SPG7-201ENST00000268704 CEP72Q9P209 647 aa18.79■□□□□ 0.6
SPG7-201ENST00000268704 MYH4Q9Y623 1939 aa18.78■□□□□ 0.6
SPG7-201ENST00000268704 TNFRSF8P28908 595 aa18.78■□□□□ 0.6
SPG7-201ENST00000268704 TM4SF1P30408 202 aa18.78■□□□□ 0.6
SPG7-201ENST00000268704 ZCWPW2Q504Y3 356 aa18.78■□□□□ 0.6
SPG7-201ENST00000268704 DNAJC19Q96DA6 116 aa18.78■□□□□ 0.6
SPG7-201ENST00000268704 CDK5RAP2Q96SN8 1893 aa18.78■□□□□ 0.6
SPG7-201ENST00000268704 COL5A3P25940 1745 aaPredicted RBP18.78■□□□□ 0.6
SPG7-201ENST00000268704 SPATA31A1Q5TZJ5 1347 aa18.78■□□□□ 0.6
SPG7-201ENST00000268704 RAD51CO43502 376 aa18.78■□□□□ 0.6
SPG7-201ENST00000268704 SERPING1P05155 500 aa18.78■□□□□ 0.6
SPG7-201ENST00000268704 GPCPD1Q9NPB8 672 aa18.78■□□□□ 0.6
SPG7-201ENST00000268704 GOLGB1Q14789 3259 aaKnown RBP18.78■□□□□ 0.6
SPG7-201ENST00000268704 FAM170AA1A519 330 aa18.77■□□□□ 0.6
SPG7-201ENST00000268704 RBAK-RBAKDNI3L0D1 243 aa18.77■□□□□ 0.6
SPG7-201ENST00000268704 SEC24CP53992 1094 aa18.77■□□□□ 0.6
SPG7-201ENST00000268704 NAB2Q15742 525 aa18.77■□□□□ 0.6
SPG7-201ENST00000268704 AMIGO3Q86WK7 504 aa18.77■□□□□ 0.6
SPG7-201ENST00000268704 RNF10Q8N5U6 811 aaKnown RBP18.77■□□□□ 0.6
SPG7-201ENST00000268704 WDR66Q8TBY9 1149 aa18.77■□□□□ 0.6
SPG7-201ENST00000268704 ATP6V0A2Q9Y487 856 aa18.77■□□□□ 0.6
SPG7-201ENST00000268704 ABCB11O95342 1321 aa18.77■□□□□ 0.6
SPG7-201ENST00000268704 GRID2IPA4D2P6 1211 aa18.77■□□□□ 0.6
SPG7-201ENST00000268704 INPP5BP32019 993 aa18.77■□□□□ 0.6
SPG7-201ENST00000268704 ADCY7P51828 1080 aa18.77■□□□□ 0.6
SPG7-201ENST00000268704 FKBP3Q00688 224 aaKnown RBP18.77■□□□□ 0.6
SPG7-201ENST00000268704 PAK2Q13177 524 aa18.77■□□□□ 0.6
SPG7-201ENST00000268704 C16orf86Q6ZW13 317 aa18.77■□□□□ 0.6
SPG7-201ENST00000268704 TEX11Q8IYF3 940 aa18.77■□□□□ 0.6
SPG7-201ENST00000268704 NEDD1Q8NHV4 660 aa18.77■□□□□ 0.6
SPG7-201ENST00000268704 INPP4AQ96PE3 977 aaPredicted RBP18.77■□□□□ 0.6
SPG7-201ENST00000268704 FAM107BQ9H098 131 aa18.77■□□□□ 0.6
SPG7-201ENST00000268704 CENPHQ9H3R5 247 aa18.77■□□□□ 0.6
SPG7-201ENST00000268704 PANK4Q9NVE7 773 aa18.77■□□□□ 0.6
SPG7-201ENST00000268704 E9PMD0 336 aa18.77■□□□□ 0.59
SPG7-201ENST00000268704 ACTN1P12814 892 aa18.77■□□□□ 0.59
SPG7-201ENST00000268704 LSP1P33241 339 aa18.77■□□□□ 0.59
SPG7-201ENST00000268704 FAM26FQ5R3K3 315 aa18.77■□□□□ 0.59
SPG7-201ENST00000268704 PDHBP11177 359 aa18.76■□□□□ 0.59
SPG7-201ENST00000268704 TMEM119Q4V9L6 283 aa18.76■□□□□ 0.59
SPG7-201ENST00000268704 MEI1Q5TIA1 1274 aa18.76■□□□□ 0.59
SPG7-201ENST00000268704 OR2W6PQ8NHA6 318 aa18.76■□□□□ 0.59
SPG7-201ENST00000268704 HPDP32754 393 aaPredicted RBP18.76■□□□□ 0.59
SPG7-201ENST00000268704 SLC18A3Q16572 532 aa18.76■□□□□ 0.59
SPG7-201ENST00000268704 GLE1Q53GS7 698 aaKnown RBP18.76■□□□□ 0.59
SPG7-201ENST00000268704 KCNV1Q6PIU1 500 aa18.76■□□□□ 0.59
SPG7-201ENST00000268704 MAATS1Q7Z4T9 603 aa18.76■□□□□ 0.59
SPG7-201ENST00000268704 DDX42Q86XP3 938 aaKnown RBP eCLIP18.76■□□□□ 0.59
SPG7-201ENST00000268704 HAS1Q92839 578 aa18.76■□□□□ 0.59
SPG7-201ENST00000268704 NR1D1P20393 614 aa18.75■□□□□ 0.59
SPG7-201ENST00000268704 KLHL30Q0D2K2 578 aa18.75■□□□□ 0.59
SPG7-201ENST00000268704 ZHX3Q9H4I2 956 aa18.75■□□□□ 0.59
SPG7-201ENST00000268704 RIC8AQ9NPQ8 531 aa18.75■□□□□ 0.59
SPG7-201ENST00000268704 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.75■□□□□ 0.59
SPG7-201ENST00000268704 KCNK3O14649 394 aa18.75■□□□□ 0.59
SPG7-201ENST00000268704 MMS22LQ6ZRQ5 1243 aa18.75■□□□□ 0.59
SPG7-201ENST00000268704 TSKSQ9UJT2 592 aa18.75■□□□□ 0.59
SPG7-201ENST00000268704 IBSPP21815 317 aaPredicted RBP18.75■□□□□ 0.59
SPG7-201ENST00000268704 PPP4CP60510 307 aa18.75■□□□□ 0.59
SPG7-201ENST00000268704 HLTFQ14527 1009 aaKnown RBP eCLIP18.75■□□□□ 0.594e-7■■■■□ 26
SPG7-201ENST00000268704 RIOX1Q9H6W3 641 aa18.75■□□□□ 0.59
SPG7-201ENST00000268704 PLAAQ9Y263 795 aa18.75■□□□□ 0.59
SPG7-201ENST00000268704 PCDHGC5Q9Y5F6 944 aa18.75■□□□□ 0.59
SPG7-201ENST00000268704 MYO1FO00160 1098 aa18.74■□□□□ 0.59
SPG7-201ENST00000268704 PPP1R11O60927 126 aaPredicted RBP18.74■□□□□ 0.59
SPG7-201ENST00000268704 CEP85LQ5SZL2 805 aa18.74■□□□□ 0.59
SPG7-201ENST00000268704 KDM7AQ6ZMT4 941 aa18.74■□□□□ 0.59
SPG7-201ENST00000268704 AP1M1Q9BXS5 423 aa18.74■□□□□ 0.59
SPG7-201ENST00000268704 RAB34Q9BZG1 259 aa18.74■□□□□ 0.59
SPG7-201ENST00000268704 DDX25Q9UHL0 483 aaKnown RBP18.74■□□□□ 0.59
SPG7-201ENST00000268704 CAPN7Q9Y6W3 813 aa18.74■□□□□ 0.59
SPG7-201ENST00000268704 MYH7BA7E2Y1 1941 aa18.74■□□□□ 0.59
SPG7-201ENST00000268704 MARCH6O60337 910 aa18.74■□□□□ 0.59
SPG7-201ENST00000268704 ERVK-9P63128 1117 aa18.74■□□□□ 0.59
SPG7-201ENST00000268704 GSTO1P78417 241 aa18.74■□□□□ 0.59
SPG7-201ENST00000268704 NAA35Q5VZE5 725 aa18.74■□□□□ 0.59
SPG7-201ENST00000268704 NYXQ9GZU5 481 aa18.74■□□□□ 0.59
SPG7-201ENST00000268704 TNRC6CQ9HCJ0 1690 aaKnown RBP18.74■□□□□ 0.59
SPG7-201ENST00000268704 TRIM59Q8IWR1 403 aa18.73■□□□□ 0.59
SPG7-201ENST00000268704 PROM2Q8N271 834 aa18.73■□□□□ 0.59
SPG7-201ENST00000268704 USP38Q8NB14 1042 aa18.73■□□□□ 0.59
SPG7-201ENST00000268704 KIAA1024Q9UPX6 916 aa18.73■□□□□ 0.59
SPG7-201ENST00000268704 ESYT2A0FGR8 921 aa18.73■□□□□ 0.59
SPG7-201ENST00000268704 POTEB3A0JP26 581 aa18.73■□□□□ 0.59
SPG7-201ENST00000268704 POTECB2RU33 542 aa18.73■□□□□ 0.59
SPG7-201ENST00000268704 HNRNPH1P31943 449 aaKnown RBP18.73■□□□□ 0.59
SPG7-201ENST00000268704 SLC16A2P36021 539 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms