RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 IFIH1Q9BYX4 1025 aaKnown RBP16.03■□□□□ 0.16
DDX39A-201ENST00000242776 RNF41Q9H4P4 317 aaPredicted RBP16.03■□□□□ 0.16
DDX39A-201ENST00000242776 NSUN3Q9H649 340 aaKnown RBP16.03■□□□□ 0.16
DDX39A-201ENST00000242776 IGFLR1Q9H665 355 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 MLXIPQ9HAP2 919 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 LAMA4Q16363 1823 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 KAT6AQ92794 2004 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 ZNF213O14771 459 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 PARP1P09874 1014 aaKnown RBP16.03■□□□□ 0.16
DDX39A-201ENST00000242776 SMIM10L2AP0DMW4 78 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 SMIM10L2BP0DMW5 78 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 UBA1P22314 1058 aaKnown RBP16.03■□□□□ 0.16
DDX39A-201ENST00000242776 PDE1AP54750 535 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 MKRN4PQ13434 485 aaPredicted RBP16.03■□□□□ 0.16
DDX39A-201ENST00000242776 HFE2Q6ZVN8 426 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 IQCA1Q86XH1 822 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 DGKHQ86XP1 1220 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 STAG2Q8N3U4 1231 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 PDCD2LQ9BRP1 358 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 C16orf70Q9BSU1 422 aa16.03■□□□□ 0.16
DDX39A-201ENST00000242776 BAZ2BQ9UIF8 2168 aaKnown RBP16.02■□□□□ 0.16
DDX39A-201ENST00000242776 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.02■□□□□ 0.15
DDX39A-201ENST00000242776 OPLAHO14841 1288 aa16.02■□□□□ 0.15
DDX39A-201ENST00000242776 PPFIA4O75335 1185 aa16.02■□□□□ 0.15
DDX39A-201ENST00000242776 ASPRV1Q53RT3 343 aa16.02■□□□□ 0.15
DDX39A-201ENST00000242776 FCHSD1Q86WN1 690 aa16.02■□□□□ 0.15
DDX39A-201ENST00000242776 TOP1MTQ969P6 601 aa16.02■□□□□ 0.15
DDX39A-201ENST00000242776 SAMD11Q96NU1 681 aa16.02■□□□□ 0.15
DDX39A-201ENST00000242776 MUTYHQ9UIF7 546 aa16.02■□□□□ 0.15
DDX39A-201ENST00000242776 ZMYM6O95789 1325 aa16.01■□□□□ 0.15
DDX39A-201ENST00000242776 POTEB3A0JP26 581 aa16.01■□□□□ 0.15
DDX39A-201ENST00000242776 H3BRB1 525 aa16.01■□□□□ 0.15
DDX39A-201ENST00000242776 PDE4AP27815 886 aa16.01■□□□□ 0.15
DDX39A-201ENST00000242776 GTF2F1P35269 517 aaKnown RBP eCLIP16.01■□□□□ 0.156e-8■■■■■ 27.6
DDX39A-201ENST00000242776 IRS1P35568 1242 aa16.01■□□□□ 0.15
DDX39A-201ENST00000242776 DLX2Q07687 328 aaPredicted RBP16.01■□□□□ 0.15
DDX39A-201ENST00000242776 PGM5Q15124 567 aa16.01■□□□□ 0.15
DDX39A-201ENST00000242776 POTEBQ6S5H4 581 aa16.01■□□□□ 0.15
DDX39A-201ENST00000242776 HOMER1Q86YM7 354 aa16.01■□□□□ 0.15
DDX39A-201ENST00000242776 ENAHQ8N8S7 591 aaPredicted RBP16.01■□□□□ 0.15
DDX39A-201ENST00000242776 ZSCAN10Q96SZ4 725 aaPredicted RBP16.01■□□□□ 0.15
DDX39A-201ENST00000242776 RNPEPQ9H4A4 650 aa16.01■□□□□ 0.15
DDX39A-201ENST00000242776 TUT1Q9H6E5 874 aaKnown RBP16.01■□□□□ 0.15
DDX39A-201ENST00000242776 SETD4Q9NVD3 440 aa16.01■□□□□ 0.15
DDX39A-201ENST00000242776 FAM50BQ9Y247 325 aa16.01■□□□□ 0.15
DDX39A-201ENST00000242776 GRM6O15303 877 aa16■□□□□ 0.15
DDX39A-201ENST00000242776 PPP1R11O60927 126 aaPredicted RBP16■□□□□ 0.15
DDX39A-201ENST00000242776 LGALS2P05162 132 aa16■□□□□ 0.15
DDX39A-201ENST00000242776 PCP11498 1178 aaKnown RBP16■□□□□ 0.15
DDX39A-201ENST00000242776 HSD17B4P51659 736 aa16■□□□□ 0.15
DDX39A-201ENST00000242776 SP4Q02446 784 aa16■□□□□ 0.15
DDX39A-201ENST00000242776 UTP14CQ5TAP6 766 aaKnown RBP16■□□□□ 0.15
DDX39A-201ENST00000242776 TRIM50Q86XT4 487 aa16■□□□□ 0.15
DDX39A-201ENST00000242776 PLEKHM2Q8IWE5 1019 aa16■□□□□ 0.15
DDX39A-201ENST00000242776 ADHFE1Q8IWW8 467 aa16■□□□□ 0.15
DDX39A-201ENST00000242776 FIBCD1Q8N539 461 aa16■□□□□ 0.15
DDX39A-201ENST00000242776 PHOX2BQ99453 314 aa16■□□□□ 0.15
DDX39A-201ENST00000242776 AMNQ9BXJ7 453 aa16■□□□□ 0.15
DDX39A-201ENST00000242776 NOP56O00567 594 aaKnown RBP15.99■□□□□ 0.15
DDX39A-201ENST00000242776 LINC01565O15544 149 aa15.99■□□□□ 0.15
DDX39A-201ENST00000242776 HOXD8P13378 290 aaPredicted RBP15.99■□□□□ 0.15
DDX39A-201ENST00000242776 CCND2P30279 289 aa15.99■□□□□ 0.15
DDX39A-201ENST00000242776 LTBRP36941 435 aa15.99■□□□□ 0.15
DDX39A-201ENST00000242776 OSBPL3Q9H4L5 887 aa15.99■□□□□ 0.15
DDX39A-201ENST00000242776 ZSWIM5Q9P217 1185 aa15.99■□□□□ 0.15
DDX39A-201ENST00000242776 TELO2Q9Y4R8 837 aa15.99■□□□□ 0.15
DDX39A-201ENST00000242776 ZNF318Q5VUA4 2279 aa15.99■□□□□ 0.15
DDX39A-201ENST00000242776 ARHGAP4P98171 946 aa15.98■□□□□ 0.15
DDX39A-201ENST00000242776 HYAL1Q12794 435 aa15.98■□□□□ 0.15
DDX39A-201ENST00000242776 KCNV1Q6PIU1 500 aa15.98■□□□□ 0.15
DDX39A-201ENST00000242776 VSIG10LQ86VR7 867 aa15.98■□□□□ 0.15
DDX39A-201ENST00000242776 PIBF1Q8WXW3 757 aa15.98■□□□□ 0.15
DDX39A-201ENST00000242776 IL17RAQ96F46 866 aa15.98■□□□□ 0.15
DDX39A-201ENST00000242776 PRKAG3Q9UGI9 489 aa15.98■□□□□ 0.15
DDX39A-201ENST00000242776 PCDHA1Q9Y5I3 950 aa15.98■□□□□ 0.15
DDX39A-201ENST00000242776 C19orf67A6NJJ6 358 aa15.97■□□□□ 0.15
DDX39A-201ENST00000242776 KLRF2D3W0D1 207 aa15.97■□□□□ 0.15
DDX39A-201ENST00000242776 MBTPS2O43462 519 aa15.97■□□□□ 0.15
DDX39A-201ENST00000242776 GHRP10912 638 aa15.97■□□□□ 0.15
DDX39A-201ENST00000242776 SDSP20132 328 aa15.97■□□□□ 0.15
DDX39A-201ENST00000242776 CCDC178Q5BJE1 867 aa15.97■□□□□ 0.15
DDX39A-201ENST00000242776 CWC27Q6UX04 472 aaKnown RBP15.97■□□□□ 0.15
DDX39A-201ENST00000242776 CYFIP1Q7L576 1253 aa15.97■□□□□ 0.15
DDX39A-201ENST00000242776 UBAC1Q9BSL1 405 aa15.97■□□□□ 0.15
DDX39A-201ENST00000242776 UPF3BQ9BZI7 483 aaKnown RBP15.97■□□□□ 0.15
DDX39A-201ENST00000242776 MAF1Q9H063 256 aa15.97■□□□□ 0.15
DDX39A-201ENST00000242776 RTEL1Q9NZ71 1219 aa15.97■□□□□ 0.15
DDX39A-201ENST00000242776 TRIOO75962 3097 aa15.97■□□□□ 0.15
DDX39A-201ENST00000242776 KIAA1671Q9BY89 1806 aa15.97■□□□□ 0.15
DDX39A-201ENST00000242776 IBSPP21815 317 aaPredicted RBP15.97■□□□□ 0.15
DDX39A-201ENST00000242776 IFIT1BQ5T764 474 aaKnown RBP15.97■□□□□ 0.15
DDX39A-201ENST00000242776 STOX1Q6ZVD7 989 aa15.97■□□□□ 0.15
DDX39A-201ENST00000242776 RNF135Q8IUD6 432 aa15.97■□□□□ 0.15
DDX39A-201ENST00000242776 ALG13Q9NP73 1137 aaKnown RBP15.97■□□□□ 0.15
DDX39A-201ENST00000242776 TECTAO75443 2155 aa15.96■□□□□ 0.15
DDX39A-201ENST00000242776 GCOM1H8Y6P7 765 aaPredicted RBP15.96■□□□□ 0.14
DDX39A-201ENST00000242776 STXBP3O00186 592 aa15.96■□□□□ 0.14
DDX39A-201ENST00000242776 TBX10O75333 385 aa15.96■□□□□ 0.14
DDX39A-201ENST00000242776 POLR2MP0CAP2 368 aa15.96■□□□□ 0.14
DDX39A-201ENST00000242776 MFAP1P55081 439 aaKnown RBP15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms