RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 IGFBP4P22692 258 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 RHPN1Q8TCX5 695 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 ABHD8Q96I13 439 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 TUBB6Q9BUF5 446 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 NEUROG2Q9H2A3 272 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 TMEM63CQ9P1W3 806 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 ATP8B1O43520 1251 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 TOM1L1O75674 476 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 KRT27Q7Z3Y8 459 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 SDR42E1Q8WUS8 393 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 IQCDQ96DY2 449 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 THAP11Q96EK4 314 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 MEIS3Q99687 375 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 MAPK13O15264 365 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 CARD9Q9H257 536 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 ABCC5O15440 1437 aa11.96□□□□□ -0.49
MSH6-201ENST00000234420 NR1D1P20393 614 aa11.96□□□□□ -0.49
MSH6-201ENST00000234420 CLCN6P51797 869 aa11.96□□□□□ -0.49
MSH6-201ENST00000234420 ARHGEF18Q6ZSZ5 1173 aa11.96□□□□□ -0.49
MSH6-201ENST00000234420 CATSPER3Q86XQ3 398 aa11.96□□□□□ -0.49
MSH6-201ENST00000234420 ARHGAP18Q8N392 663 aa11.96□□□□□ -0.49
MSH6-201ENST00000234420 TEX9Q8N6V9 391 aa11.96□□□□□ -0.49
MSH6-201ENST00000234420 SMAD5Q99717 465 aaKnown RBP11.96□□□□□ -0.49
MSH6-201ENST00000234420 NOVA2Q9UNW9 492 aaKnown RBP11.96□□□□□ -0.49
MSH6-201ENST00000234420 C2CD2LO14523 706 aa11.96□□□□□ -0.49
MSH6-201ENST00000234420 PPP1R2P41236 205 aa11.96□□□□□ -0.49
MSH6-201ENST00000234420 KCNJ6P48051 423 aa11.96□□□□□ -0.49
MSH6-201ENST00000234420 UPF3AQ9H1J1 476 aaKnown RBP11.96□□□□□ -0.49
MSH6-201ENST00000234420 RNPEPQ9H4A4 650 aa11.96□□□□□ -0.49
MSH6-201ENST00000234420 GDAQ9Y2T3 454 aa11.96□□□□□ -0.49
MSH6-201ENST00000234420 IL15P40933 162 aaPredicted RBP11.96□□□□□ -0.49
MSH6-201ENST00000234420 HDAC4P56524 1084 aa11.96□□□□□ -0.49
MSH6-201ENST00000234420 PDE1BQ01064 536 aa11.96□□□□□ -0.49
MSH6-201ENST00000234420 FAM160B1Q5W0V3 765 aa11.96□□□□□ -0.49
MSH6-201ENST00000234420 RNF207Q6ZRF8 634 aa11.96□□□□□ -0.49
MSH6-201ENST00000234420 PARP9Q8IXQ6 854 aa11.96□□□□□ -0.49
MSH6-201ENST00000234420 PPP1R13BQ96KQ4 1090 aa11.96□□□□□ -0.49
MSH6-201ENST00000234420 GRIN2BQ13224 1484 aa11.96□□□□□ -0.5
MSH6-201ENST00000234420 HOXD10P28358 340 aa11.96□□□□□ -0.5
MSH6-201ENST00000234420 DYNLT1P63172 113 aa11.96□□□□□ -0.5
MSH6-201ENST00000234420 CDO1Q16878 200 aa11.96□□□□□ -0.5
MSH6-201ENST00000234420 AKAP4Q5JQC9 854 aa11.96□□□□□ -0.5
MSH6-201ENST00000234420 BCRP11274 1271 aa11.96□□□□□ -0.5
MSH6-201ENST00000234420 RAD23BP54727 409 aa11.96□□□□□ -0.5
MSH6-201ENST00000234420 C2orf54Q08AI8 447 aa11.96□□□□□ -0.5
MSH6-201ENST00000234420 POSTNQ15063 836 aa11.96□□□□□ -0.5
MSH6-201ENST00000234420 RFX8Q6ZV50 586 aa11.96□□□□□ -0.5
MSH6-201ENST00000234420 DYRK4Q9NR20 520 aa11.96□□□□□ -0.5
MSH6-201ENST00000234420 NPM3O75607 178 aaKnown RBP11.96□□□□□ -0.5
MSH6-201ENST00000234420 PFDN6O15212 129 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 RNF113AO15541 343 aaKnown RBP11.95□□□□□ -0.5
MSH6-201ENST00000234420 COBLO75128 1261 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 STAT2P52630 851 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 CCDC144BQ3MJ40 725 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 GLE1Q53GS7 698 aaKnown RBP11.95□□□□□ -0.5
MSH6-201ENST00000234420 ATL3Q6DD88 541 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 ARL10Q8N8L6 244 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 LZICQ8WZA0 190 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 CFAP36Q96G28 342 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 KIF2CQ99661 725 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 LSM14BQ9BX40 385 aaKnown RBP11.95□□□□□ -0.5
MSH6-201ENST00000234420 LMBRD1Q9NUN5 540 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 GARSP41250 739 aaKnown RBP11.95□□□□□ -0.5
MSH6-201ENST00000234420 GYG1P46976 350 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 PLCD1P51178 756 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 SUPT20HL1Q3ZLR7 823 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 FAM47EQ6ZV65 393 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 MIS12Q9H081 205 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 CHCHD3Q9NX63 227 aaKnown RBP11.95□□□□□ -0.5
MSH6-201ENST00000234420 HESX1Q9UBX0 185 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 TROQ12816 1431 aaPredicted RBP11.95□□□□□ -0.5
MSH6-201ENST00000234420 H7C0C1 242 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 TCP1P17987 556 aaKnown RBP11.95□□□□□ -0.5
MSH6-201ENST00000234420 ATP5OP48047 213 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 EN1Q05925 392 aaPredicted RBP11.95□□□□□ -0.5
MSH6-201ENST00000234420 PNOCQ13519 176 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 OR8K1Q8NGG5 319 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 ORAI2Q96SN7 254 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 NXF1Q9UBU9 619 aaKnown RBP11.95□□□□□ -0.5
MSH6-201ENST00000234420 TLK1Q9UKI8 766 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 PRR23D1E9PI22 279 aaPredicted RBP11.95□□□□□ -0.5
MSH6-201ENST00000234420 PRR23D2P0DMB1 279 aaPredicted RBP11.95□□□□□ -0.5
MSH6-201ENST00000234420 HIF1AQ16665 826 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 CYP4F22Q6NT55 531 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 ANKRD36BP1Q96IX9 119 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 POLR2MP0CAP2 368 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 EPHB4P54760 987 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 CYP4A11Q02928 519 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 NUGGCQ68CJ6 796 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 SH3KBP1Q96B97 665 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 RAB20Q9NX57 234 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.95□□□□□ -0.5
MSH6-201ENST00000234420 STOML1Q9UBI4 398 aa11.95□□□□□ -0.5
MSH6-201ENST00000234420 ASMTLO95671 621 aa11.94□□□□□ -0.5
MSH6-201ENST00000234420 EHHADHQ08426 723 aa11.94□□□□□ -0.5
MSH6-201ENST00000234420 BFSP1Q12934 665 aa11.94□□□□□ -0.5
MSH6-201ENST00000234420 SLC35F6Q8N357 371 aa11.94□□□□□ -0.5
MSH6-201ENST00000234420 PMLP29590 882 aa11.94□□□□□ -0.5
MSH6-201ENST00000234420 RECQLP46063 649 aaPredicted RBP11.94□□□□□ -0.5
MSH6-201ENST00000234420 TFAMQ00059 246 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms