RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 FRMD3A2A2Y4 597 aa19.46■□□□□ 0.71
CDKN1B-201ENST00000228872 MGRN1O60291 552 aa19.46■□□□□ 0.71
CDKN1B-201ENST00000228872 SERPINB2P05120 415 aa19.46■□□□□ 0.71
CDKN1B-201ENST00000228872 MYBP10242 640 aa19.46■□□□□ 0.71
CDKN1B-201ENST00000228872 UBE4AQ14139 1066 aa19.46■□□□□ 0.71
CDKN1B-201ENST00000228872 CCDC24Q8N4L8 307 aa19.46■□□□□ 0.71
CDKN1B-201ENST00000228872 MIGA1Q8NAN2 632 aa19.46■□□□□ 0.71
CDKN1B-201ENST00000228872 OR2W6PQ8NHA6 318 aa19.46■□□□□ 0.71
CDKN1B-201ENST00000228872 LRRC15Q8TF66 581 aa19.46■□□□□ 0.71
CDKN1B-201ENST00000228872 TMC4Q7Z404 712 aa19.45■□□□□ 0.7
CDKN1B-201ENST00000228872 TAX1BP1Q86VP1 789 aa19.45■□□□□ 0.7
CDKN1B-201ENST00000228872 TRIM6Q9C030 488 aaPredicted RBP19.45■□□□□ 0.7
CDKN1B-201ENST00000228872 TAF1DQ9H5J8 278 aaPredicted RBP19.45■□□□□ 0.7
CDKN1B-201ENST00000228872 BACH1O14867 736 aa19.45■□□□□ 0.7
CDKN1B-201ENST00000228872 ATP2C2O75185 946 aa19.45■□□□□ 0.7
CDKN1B-201ENST00000228872 DNAJC8O75937 253 aaPredicted RBP19.45■□□□□ 0.7
CDKN1B-201ENST00000228872 ZNF844Q08AG5 666 aa19.45■□□□□ 0.7
CDKN1B-201ENST00000228872 UAP1Q16222 522 aaPredicted RBP19.45■□□□□ 0.7
CDKN1B-201ENST00000228872 VWA3BQ502W6 1294 aa19.45■□□□□ 0.7
CDKN1B-201ENST00000228872 SRBD1Q8N5C6 995 aaKnown RBP19.45■□□□□ 0.7
CDKN1B-201ENST00000228872 INPP4AQ96PE3 977 aaPredicted RBP19.45■□□□□ 0.7
CDKN1B-201ENST00000228872 MMRN2Q9H8L6 949 aa19.45■□□□□ 0.7
CDKN1B-201ENST00000228872 SLC24A3Q9HC58 644 aa19.45■□□□□ 0.7
CDKN1B-201ENST00000228872 POLRMTO00411 1230 aaKnown RBP19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 PALMO75781 387 aa19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 FTCDO95954 541 aa19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 PAEPP09466 180 aa19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 CALM1P0DP23 149 aa19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 CALM2P0DP24 149 aa19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 CALM3P0DP25 149 aa19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 SCG2P13521 617 aa19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 PDE4DQ08499 809 aa19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 STK4Q13043 487 aa19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 BIRC3Q13489 604 aa19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 DTHD1Q6ZMT9 781 aa19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 BAP1Q92560 729 aa19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 RAPGEF5Q92565 580 aa19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 P3H4Q92791 437 aa19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 TATDN2Q93075 761 aa19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 CNOT8Q9UFF9 292 aaKnown RBP19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 ECHS1P30084 290 aa19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 CCDC178Q5BJE1 867 aa19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 CCT6BQ92526 530 aa19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 HVCN1Q96D96 273 aa19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 ISCUQ9H1K1 167 aa19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 ANAPC4Q9UJX5 808 aa19.44■□□□□ 0.7
CDKN1B-201ENST00000228872 GHRP10912 638 aa19.43■□□□□ 0.7
CDKN1B-201ENST00000228872 VEGFAP15692 232 aaPredicted RBP19.43■□□□□ 0.7
CDKN1B-201ENST00000228872 UBA7P41226 1012 aa19.43■□□□□ 0.7
CDKN1B-201ENST00000228872 ERVK-9P63128 1117 aa19.43■□□□□ 0.7
CDKN1B-201ENST00000228872 PPP2R2AP63151 447 aa19.43■□□□□ 0.7
CDKN1B-201ENST00000228872 HLTFQ14527 1009 aaKnown RBP eCLIP19.43■□□□□ 0.7
CDKN1B-201ENST00000228872 ARMC9Q7Z3E5 817 aa19.43■□□□□ 0.7
CDKN1B-201ENST00000228872 COL23A1Q86Y22 540 aaPredicted RBP19.43■□□□□ 0.7
CDKN1B-201ENST00000228872 KIRREL3Q8IZU9 778 aa19.43■□□□□ 0.7
CDKN1B-201ENST00000228872 NDST4Q9H3R1 872 aa19.43■□□□□ 0.7
CDKN1B-201ENST00000228872 PPP1R12BO60237 982 aaPredicted RBP19.43■□□□□ 0.7
CDKN1B-201ENST00000228872 DDAH1O94760 285 aa19.43■□□□□ 0.7
CDKN1B-201ENST00000228872 GBP2P32456 591 aaPredicted RBP19.43■□□□□ 0.7
CDKN1B-201ENST00000228872 TNNC1P63316 161 aa19.43■□□□□ 0.7
CDKN1B-201ENST00000228872 CRY2Q49AN0 593 aa19.43■□□□□ 0.7
CDKN1B-201ENST00000228872 PDXDC1Q6P996 788 aa19.43■□□□□ 0.7
CDKN1B-201ENST00000228872 EIF1ADQ8N9N8 165 aaKnown RBP19.43■□□□□ 0.7
CDKN1B-201ENST00000228872 CCSER1Q9C0I3 900 aa19.43■□□□□ 0.7
CDKN1B-201ENST00000228872 ANKRD2Q9GZV1 360 aa19.43■□□□□ 0.7
CDKN1B-201ENST00000228872 ANKRD31Q8N7Z5 1873 aa19.43■□□□□ 0.7
CDKN1B-201ENST00000228872 ZNF804BA4D1E1 1349 aa19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 SSU72P8A0A1W2PR75 194 aa19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 RPSAP08865 295 aaKnown RBP19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 FCER1AP12319 257 aa19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 RNASE9P60153 205 aaKnown RBP19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 ELF3P78545 371 aaPredicted RBP19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 NAA25Q14CX7 972 aa19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 NBPF9Q3BBW0 867 aa19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 RUFY4Q6ZNE9 571 aa19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 KLHL7Q8IXQ5 586 aa19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 SDR42E1Q8WUS8 393 aa19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 CCDC47Q96A33 483 aaKnown RBP19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 KDM4CQ9H3R0 1056 aa19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 FAM205AQ6ZU69 1335 aa19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 ATP6V1G2O95670 118 aa19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 CTNNA1P35221 906 aaKnown RBP19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 SLC8A3P57103 927 aa19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 GRAPQ13588 217 aa19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 AGBL2Q5U5Z8 902 aa19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 GKAP1Q5VSY0 366 aaPredicted RBP19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 GRAPLQ8TC17 118 aaPredicted RBP19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 TMEM60Q9H2L4 133 aa19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 BCCIPQ9P287 314 aaKnown RBP eCLIP19.42■□□□□ 0.7
CDKN1B-201ENST00000228872 RBAK-RBAKDNI3L0D1 243 aa19.41■□□□□ 0.7
CDKN1B-201ENST00000228872 ACCSLQ4AC99 568 aa19.41■□□□□ 0.7
CDKN1B-201ENST00000228872 MEI1Q5TIA1 1274 aa19.41■□□□□ 0.7
CDKN1B-201ENST00000228872 HGSNATQ68CP4 663 aa19.41■□□□□ 0.7
CDKN1B-201ENST00000228872 NAIF1Q69YI7 327 aaPredicted RBP19.41■□□□□ 0.7
CDKN1B-201ENST00000228872 NLGN1Q8N2Q7 840 aa19.41■□□□□ 0.7
CDKN1B-201ENST00000228872 USP38Q8NB14 1042 aa19.41■□□□□ 0.7
CDKN1B-201ENST00000228872 LRRC45Q96CN5 670 aa19.41■□□□□ 0.7
CDKN1B-201ENST00000228872 SEMA6BQ9H3T3 888 aa19.41■□□□□ 0.7
CDKN1B-201ENST00000228872 NOD2Q9HC29 1040 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms