RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 NfixP70257 488 aa7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Trip13Q3UA06 432 aa7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Gnat3Q3V3I2 354 aa7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Ovgp1Q62010 721 aa7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Tgfb1i1Q62219 461 aa7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Kif1bpQ6ZPU9 617 aa7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Fnbp1Q80TY0 616 aa7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Trim68Q8K243 485 aa7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Nup133Q8R0G9 1155 aa7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Tex13bQ99MW5 186 aa7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Utp11Q9CZJ1 253 aaKnown RBP7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Slx4ipQ9D7Y9 413 aa7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Zscan12Q9Z1D7 501 aa7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Net1Q9Z206 595 aa7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Ube4aE9Q735 1028 aa7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 5830473C10RikF8VQ07 620 aa7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Tnnc1P19123 161 aa7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Casp1P29452 402 aa7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Rpl13P47963 211 aaKnown RBP7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Lzts1P60853 599 aa7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Cct6aP80317 531 aaKnown RBP7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Ddx5Q61656 614 aaKnown RBP7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Mum1Q6DID5 682 aa7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Dhx58Q99J87 678 aa7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Tnfrsf10bQ9QZM4 381 aa7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Atp8b3Q6UQ17 1335 aa7.79□□□□□ -1.16
Chm-202ENSMUST00000113388 Irgm2A0A140LIF8 407 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Zmynd8A2A484 1235 aaKnown RBP7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Csf1rP09581 977 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Celf1P28659 486 aaKnown RBP7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Dab2ipQ3UHC7 1189 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Pfdn4Q3UWL8 134 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Cyfip2Q5SQX6 1253 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Ptpn14Q62130 1189 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Cspg5Q71M36 566 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Lrrc1Q80VQ1 524 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Pank4Q80YV4 820 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Bbs9Q811G0 885 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Cnot10Q8BH15 744 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 D130040H23RikQ8BII3 405 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Gjd4Q8BSD4 364 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 HlfQ8BW74 295 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Arhgap24Q8C4V1 747 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Nudt13Q8JZU0 352 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Pcdhga10Q91XY9 930 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Psma8Q9CWH6 250 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Rrs1Q9CYH6 365 aaKnown RBP7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Chmp2aQ9DB34 222 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Rgs3Q9DC04 966 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Gdf11Q9Z1W4 405 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Mybpc1D3YU50 1127 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Trim12cD3Z3L3 497 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 ChkbO55229 394 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Atp6v0a2P15920 856 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Atxn10P28658 475 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 LifrP42703 1092 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Stmn4P63042 189 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Crnkl1P63154 690 aaKnown RBP7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Mcm9Q2KHI9 1134 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Rasip1Q3U0S6 961 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Kdm7aQ3UWM4 940 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Ttc29Q80VM3 471 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Zfand2bQ91X58 257 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Bloc1s2Q9CWG9 143 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Naa16Q9DBB4 864 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 C4bP01029 1738 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Dnajc25A2ALW5 357 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Neurod6P48986 337 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Stim2P83093 746 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Rtkn2Q14B46 604 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Garnl3Q3V0G7 1038 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 CyldQ80TQ2 952 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Trim14Q8BVW3 440 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Vps52Q8C754 723 aaKnown RBP7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Mnd1Q8K396 205 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Ssx2ipQ8VC66 615 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Ttc5Q99LG4 440 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Tex9Q9D845 387 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Tceal9Q9DD24 104 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 PhaxQ9JJT9 385 aaKnown RBP7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Gfpt2Q9Z2Z9 682 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Gm382B1AXN3 1250 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Nfxl1E9Q8I7 918 aaKnown RBP7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Gm3383J3QQ59 259 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Gm3164L7N2B9 238 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Gm3239L7N2D9 227 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Ube3aO08759 870 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Sfi1Q3UZY0 1216 aaKnown RBP7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Trim38Q5SZ99 471 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Palm2Q8BR92 376 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Ncoa5Q91W39 579 aaKnown RBP7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Vps36Q91XD6 386 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Lpin2Q99PI5 893 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 UvssaQ9D479 717 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Adarb2Q9JI20 745 aa7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Orc1Q9Z1N2 840 aaKnown RBP7.78□□□□□ -1.16
Chm-202ENSMUST00000113388 Bpifb4A2BGH0 617 aa7.77□□□□□ -1.16
Chm-202ENSMUST00000113388 Fkbp1aP26883 108 aaKnown RBP7.77□□□□□ -1.16
Chm-202ENSMUST00000113388 Cetn1P41209 172 aa7.77□□□□□ -1.16
Chm-202ENSMUST00000113388 E330034G19RikQ3UWX6 351 aa7.77□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms