RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Fbxo18Q8K2I9 1042 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Hs2st1Q8R3H7 356 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Zkscan3Q91VW9 553 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 PdiltQ9DAN1 588 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Rpf2Q9JJ80 306 aaKnown RBP17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Pacsin2Q9WVE8 486 aaKnown RBP17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Plekhg2Q6KAU7 1340 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Zscan18E9PUD6 809 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Clcn6O35454 870 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Arhgap6O54834 987 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Gna11P21278 359 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Rexo1Q7TT28 1213 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Armcx3Q8BHS6 379 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Taok3Q8BYC6 898 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Rcor2Q8C796 523 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Dnajc28Q8VCE1 385 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Fam187aQ9D3R5 417 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Fsip1Q9D3V5 435 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Tmem191cQ9JJB1 302 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Slfn1Q9Z0I7 337 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Cacna1sQ02789 1880 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Dclk3Q8BWQ5 790 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Stap2Q8R0L1 411 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Pcdhb5Q91XZ5 792 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Ppp1r3aQ99MR9 1089 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Ankrd2Q9WV06 328 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Klrc1Q9Z202 244 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Tex13cD3YU32 604 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Rsbn1lD3Z0K6 821 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Rnaseh1O70338 285 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Gdap1O88741 358 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Setd4P58467 439 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Sh3gl1Q62419 368 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Ppp1r11Q8K1L5 131 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 IntS13Q8QZV7 732 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Trap1Q9CQN1 706 aaKnown RBP17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Mtmr9Q9Z2D0 545 aa17.81■□□□□ 0.44
Trim28-201ENSMUST00000005705 Aco1P28271 889 aaKnown RBP17.8■□□□□ 0.44
Trim28-201ENSMUST00000005705 GssP51855 474 aa17.8■□□□□ 0.44
Trim28-201ENSMUST00000005705 Eef2P58252 858 aaKnown RBP17.8■□□□□ 0.44
Trim28-201ENSMUST00000005705 Rassf10Q8BL43 508 aa17.8■□□□□ 0.44
Trim28-201ENSMUST00000005705 Scyl2Q8CFE4 930 aa17.8■□□□□ 0.44
Trim28-201ENSMUST00000005705 Tor1aip1Q921T2 595 aaKnown RBP17.8■□□□□ 0.44
Trim28-201ENSMUST00000005705 Esyt2Q3TZZ7 845 aa17.8■□□□□ 0.44
Trim28-201ENSMUST00000005705 Maip1Q8BHE8 291 aa17.8■□□□□ 0.44
Trim28-201ENSMUST00000005705 Ccdc186Q8C9S4 917 aa17.8■□□□□ 0.44
Trim28-201ENSMUST00000005705 Nxnl2Q9D531 156 aa17.8■□□□□ 0.44
Trim28-201ENSMUST00000005705 GnaqP21279 359 aa17.79■□□□□ 0.44
Trim28-201ENSMUST00000005705 Prr7Q3V0I2 269 aa17.79■□□□□ 0.44
Trim28-201ENSMUST00000005705 Cplx4Q80WM3 160 aa17.79■□□□□ 0.44
Trim28-201ENSMUST00000005705 MlxiplQ99MZ3 864 aa17.79■□□□□ 0.44
Trim28-201ENSMUST00000005705 Duox1A2AQ92 1551 aa17.79■□□□□ 0.44
Trim28-201ENSMUST00000005705 Cpb1B2RS76 415 aa17.79■□□□□ 0.44
Trim28-201ENSMUST00000005705 Slc51bQ80WK2 128 aa17.79■□□□□ 0.44
Trim28-201ENSMUST00000005705 Cracr2bQ80ZJ8 394 aa17.79■□□□□ 0.44
Trim28-201ENSMUST00000005705 UvssaQ9D479 717 aa17.79■□□□□ 0.44
Trim28-201ENSMUST00000005705 Capn9Q9D805 690 aa17.79■□□□□ 0.44
Trim28-201ENSMUST00000005705 Gkap1Q9JMB0 366 aa17.79■□□□□ 0.44
Trim28-201ENSMUST00000005705 Arhgap33Q80YF9 1305 aa17.79■□□□□ 0.44
Trim28-201ENSMUST00000005705 Xrcc6P23475 608 aa17.79■□□□□ 0.44
Trim28-201ENSMUST00000005705 Gdf10P97737 476 aa17.79■□□□□ 0.44
Trim28-201ENSMUST00000005705 Ccdc33Q3ULW6 985 aa17.79■□□□□ 0.44
Trim28-201ENSMUST00000005705 Prl7b1Q8CGZ9 251 aa17.79■□□□□ 0.44
Trim28-201ENSMUST00000005705 OplahQ8K010 1288 aa17.79■□□□□ 0.44
Trim28-201ENSMUST00000005705 Vwa5aQ99KC8 793 aaKnown RBP17.79■□□□□ 0.44
Trim28-201ENSMUST00000005705 Ebag9Q9D0V7 213 aa17.79■□□□□ 0.44
Trim28-201ENSMUST00000005705 Polr2fP61219 127 aa17.78■□□□□ 0.44
Trim28-201ENSMUST00000005705 Rhpn1Q61085 643 aa17.78■□□□□ 0.44
Trim28-201ENSMUST00000005705 Mindy1Q76LS9 468 aa17.78■□□□□ 0.44
Trim28-201ENSMUST00000005705 Lsm14bQ8CGC4 385 aaKnown RBP17.78■□□□□ 0.44
Trim28-201ENSMUST00000005705 Krt34Q9D646 392 aa17.78■□□□□ 0.44
Trim28-201ENSMUST00000005705 Tcp1P11983 556 aaKnown RBP17.78■□□□□ 0.44
Trim28-201ENSMUST00000005705 Thap3Q8BJ25 218 aa17.78■□□□□ 0.44
Trim28-201ENSMUST00000005705 Q8BWG4 1187 aa17.78■□□□□ 0.44
Trim28-201ENSMUST00000005705 Skor1Q8BX46 964 aa17.78■□□□□ 0.44
Trim28-201ENSMUST00000005705 Cdan1Q8CC12 1239 aa17.78■□□□□ 0.44
Trim28-201ENSMUST00000005705 Mmgt1Q8K273 131 aaKnown RBP17.78■□□□□ 0.44
Trim28-201ENSMUST00000005705 Plagl2Q925T4 496 aa17.78■□□□□ 0.44
Trim28-201ENSMUST00000005705 Dph5Q9CWQ0 281 aa17.78■□□□□ 0.44
Trim28-201ENSMUST00000005705 Zcrb1Q9CZ96 217 aaKnown RBP17.78■□□□□ 0.44
Trim28-201ENSMUST00000005705 Ccdc89Q9DA73 370 aa17.78■□□□□ 0.44
Trim28-201ENSMUST00000005705 Kcng1A2BDX4 514 aa17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 InhbeO08717 350 aa17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 AgtP11859 477 aa17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 SarsP26638 512 aaKnown RBP17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 Psen1P49769 467 aa17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 Hmgb1P63158 215 aaKnown RBP17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 Kcnb1Q03717 857 aa17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 Tspyl3Q3UYP3 334 aa17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 Krt87Q6IMF0 495 aa17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 Ddx10Q80Y44 875 aaKnown RBP17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 Bola2Q8BGS2 86 aa17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 Afg3l2Q8JZQ2 802 aaKnown RBP17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 Q8VDP2 222 aa17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 Gpihbp1Q9D1N2 228 aa17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 Smco2Q9DA21 347 aa17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 Stk11Q9WTK7 436 aa17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 VimP20152 466 aaKnown RBP17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 Ca8P28651 291 aa17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 Ctnnd1P30999 938 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 141.7 ms