RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB4	YOL112W	XYL2	Q07993	356 aa		9.06	□□□□□ -0.96
MSB4	YOL112W	PUS9	Q12069	462 aa		9.06	□□□□□ -0.96
MSB4	YOL112W	RPN5	Q12250	445 aa	Known RBP	9.06	□□□□□ -0.96
MSB4	YOL112W	ALG7	P07286	448 aa		9.05	□□□□□ -0.96
MSB4	YOL112W	TAH1	P25638	111 aa	Predicted RBP	9.05	□□□□□ -0.96
MSB4	YOL112W	PHO91	P27514	894 aa		9.05	□□□□□ -0.96
MSB4	YOL112W	SEC17	P32602	292 aa		9.05	□□□□□ -0.96
MSB4	YOL112W	TSC10	P38342	320 aa		9.05	□□□□□ -0.96
MSB4	YOL112W	SEC26	P41810	973 aa	Known RBP	9.05	□□□□□ -0.96
MSB4	YOL112W	ELP2	P42935	788 aa		9.05	□□□□□ -0.96
MSB4	YOL112W	CCT7	P42943	550 aa	Known RBP	9.05	□□□□□ -0.96
MSB4	YOL112W	MPS3	P47069	682 aa		9.05	□□□□□ -0.96
MSB4	YOL112W	YGR266W	P53326	701 aa		9.05	□□□□□ -0.96
MSB4	YOL112W	APC4	Q04601	652 aa		9.05	□□□□□ -0.96
MSB4	YOL112W	YPR202W	Q08993	238 aa		9.05	□□□□□ -0.96
MSB4	YOL112W	NTO1	Q12311	748 aa		9.05	□□□□□ -0.96
MSB4	YOL112W	GLE1	Q12315	538 aa		9.05	□□□□□ -0.96
MSB4	YOL112W	COR1	P07256	457 aa		9.04	□□□□□ -0.96
MSB4	YOL112W	MRP13	P12686	339 aa		9.04	□□□□□ -0.96
MSB4	YOL112W	VPS33	P20795	691 aa		9.04	□□□□□ -0.96
MSB4	YOL112W	CCA1	P21269	546 aa		9.04	□□□□□ -0.96
MSB4	YOL112W	MXR2	P25566	168 aa		9.04	□□□□□ -0.96
MSB4	YOL112W	DGR2	P32330	852 aa		9.04	□□□□□ -0.96
MSB4	YOL112W	CUE2	P36075	443 aa	Known RBP	9.04	□□□□□ -0.96
MSB4	YOL112W	OMA1	P36163	345 aa		9.04	□□□□□ -0.96
MSB4	YOL112W	MRPL15	P36523	253 aa		9.04	□□□□□ -0.96
MSB4	YOL112W	YHR210C	P38893	341 aa		9.04	□□□□□ -0.96
MSB4	YOL112W	TMA22	P47089	198 aa	Predicted RBP	9.04	□□□□□ -0.96
MSB4	YOL112W	ARC35	P53731	342 aa	Known RBP	9.04	□□□□□ -0.96
MSB4	YOL112W	TRS23	Q03784	219 aa		9.04	□□□□□ -0.96
MSB4	YOL112W	YOL159C	Q08300	171 aa		9.04	□□□□□ -0.96
MSB4	YOL112W	GCN1	P33892	2672 aa	Known RBP	9.04	□□□□□ -0.96
MSB4	YOL112W	NUM1	Q00402	2748 aa		9.04	□□□□□ -0.96
MSB4	YOL112W	ATP4	P05626	244 aa		9.03	□□□□□ -0.96
MSB4	YOL112W	HO	P09932	586 aa		9.03	□□□□□ -0.96
MSB4	YOL112W	UBS1	P38290	277 aa		9.03	□□□□□ -0.96
MSB4	YOL112W	YER158C	P40095	573 aa		9.03	□□□□□ -0.96
MSB4	YOL112W	HPM1	P40481	377 aa		9.03	□□□□□ -0.96
MSB4	YOL112W	PMT4	P46971	762 aa		9.03	□□□□□ -0.96
MSB4	YOL112W	HOC1	P47124	396 aa		9.03	□□□□□ -0.96
MSB4	YOL112W	EFR3	Q03653	782 aa	Known RBP	9.03	□□□□□ -0.96
MSB4	YOL112W	YMR010W	Q03687	405 aa		9.03	□□□□□ -0.96
MSB4	YOL112W	VPS74	Q06385	345 aa		9.03	□□□□□ -0.96
MSB4	YOL112W	ERF2	Q06551	359 aa		9.03	□□□□□ -0.96
MSB4	YOL112W	GET4	Q12125	312 aa		9.03	□□□□□ -0.96
MSB4	YOL112W	SNF8	Q12483	233 aa		9.03	□□□□□ -0.96
MSB4	YOL112W	YPR096C	O13587	100 aa		9.02	□□□□□ -0.96
MSB4	YOL112W	CDC12	P32468	407 aa	Known RBP	9.02	□□□□□ -0.96
MSB4	YOL112W	PDR3	P33200	976 aa		9.02	□□□□□ -0.96
MSB4	YOL112W	MRPL17	P36528	281 aa		9.02	□□□□□ -0.96
MSB4	YOL112W	MNN2	P38069	597 aa		9.02	□□□□□ -0.96
MSB4	YOL112W	YIL152W	P40455	235 aa		9.02	□□□□□ -0.96
MSB4	YOL112W	TEN1	Q07921	160 aa		9.02	□□□□□ -0.96
MSB4	YOL112W	NPR1	P22211	790 aa		9.02	□□□□□ -0.97
MSB4	YOL112W	PHO87	P25360	923 aa		9.02	□□□□□ -0.97
MSB4	YOL112W	SPB1	P25582	841 aa	Predicted RBP	9.02	□□□□□ -0.97
MSB4	YOL112W	ZIP1	P31111	875 aa		9.02	□□□□□ -0.97
MSB4	YOL112W	SIN4	P32259	974 aa		9.02	□□□□□ -0.97
MSB4	YOL112W	YMC1	P32331	307 aa		9.02	□□□□□ -0.97
MSB4	YOL112W	CAT2	P32796	670 aa	Known RBP	9.02	□□□□□ -0.97
MSB4	YOL112W	RPS27A	P35997	82 aa	Known RBP	9.02	□□□□□ -0.97
MSB4	YOL112W	GLG1	P36143	616 aa		9.02	□□□□□ -0.97
MSB4	YOL112W	RPS27B	P38711	82 aa		9.02	□□□□□ -0.97
MSB4	YOL112W	TRM5	P38793	499 aa		9.02	□□□□□ -0.97
MSB4	YOL112W	MTG2	P38860	518 aa		9.02	□□□□□ -0.97
MSB4	YOL112W	STE24	P47154	453 aa		9.02	□□□□□ -0.97
MSB4	YOL112W	JHD2	P47156	728 aa	Predicted RBP	9.02	□□□□□ -0.97
MSB4	YOL112W	COG2	P53271	262 aa		9.02	□□□□□ -0.97
MSB4	YOL112W	RQC1	Q05468	723 aa	Known RBP	9.02	□□□□□ -0.97
MSB4	YOL112W	YDR338C	Q05497	695 aa		9.02	□□□□□ -0.97
MSB4	YOL112W	GLO4	Q12320	285 aa		9.02	□□□□□ -0.97
MSB4	YOL112W	AI4	P03878	556 aa		9.01	□□□□□ -0.97
MSB4	YOL112W	STE7	P06784	515 aa		9.01	□□□□□ -0.97
MSB4	YOL112W	UNG1	P12887	359 aa		9.01	□□□□□ -0.97
MSB4	YOL112W	UGP1	P32861	499 aa	Known RBP	9.01	□□□□□ -0.97
MSB4	YOL112W	OAR1	P35731	278 aa		9.01	□□□□□ -0.97
MSB4	YOL112W	GAB1	P41733	394 aa		9.01	□□□□□ -0.97
MSB4	YOL112W	PSA1	P41940	361 aa	Known RBP	9.01	□□□□□ -0.97
MSB4	YOL112W	ERG13	P54839	491 aa	Known RBP	9.01	□□□□□ -0.97
MSB4	YOL112W	PUN1	Q06991	263 aa		9.01	□□□□□ -0.97
MSB4	YOL112W	YOL131W	Q08270	108 aa		9.01	□□□□□ -0.97
MSB4	YOL112W	OSW1	Q08692	278 aa		9.01	□□□□□ -0.97
MSB4	YOL112W	FRE7	Q12333	620 aa		9.01	□□□□□ -0.97
MSB4	YOL112W	ATP6	P00854	259 aa		9	□□□□□ -0.97
MSB4	YOL112W	CBP2	P03874	630 aa	Predicted RBP	9	□□□□□ -0.97
MSB4	YOL112W	ARG3	P05150	338 aa		9	□□□□□ -0.97
MSB4	YOL112W	CUP1-1	P0CX80	61 aa		9	□□□□□ -0.97
MSB4	YOL112W	CUP1-2	P0CX81	61 aa		9	□□□□□ -0.97
MSB4	YOL112W	RAP1	P11938	827 aa		9	□□□□□ -0.97
MSB4	YOL112W	SAN1	P22470	610 aa		9	□□□□□ -0.97
MSB4	YOL112W	YGL015C	P33199	130 aa		9	□□□□□ -0.97
MSB4	YOL112W	STP2	P38704	541 aa		9	□□□□□ -0.97
MSB4	YOL112W	YIL001W	P40560	513 aa		9	□□□□□ -0.97
MSB4	YOL112W	PMT3	P47190	753 aa		9	□□□□□ -0.97
MSB4	YOL112W	REC102	Q02721	264 aa		9	□□□□□ -0.97
MSB4	YOL112W	RPM2	Q02773	1202 aa		9	□□□□□ -0.97
MSB4	YOL112W	YPL071C	Q02864	156 aa		9	□□□□□ -0.97
MSB4	YOL112W	YDR476C	Q03362	224 aa		9	□□□□□ -0.97
MSB4	YOL112W	GAD1	Q04792	585 aa		9	□□□□□ -0.97
MSB4	YOL112W	MLH3	Q12083	715 aa		9	□□□□□ -0.97

Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms