RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 TAAR1Q96RJ0 339 aa11.46□□□□□ -0.57
PHGDH-212ENST00000641247 TLR9Q9NR96 1032 aa11.46□□□□□ -0.57
PHGDH-212ENST00000641247 PPP4R2Q9NY27 417 aa11.46□□□□□ -0.57
PHGDH-212ENST00000641247 CLEC1BQ9P126 229 aa11.46□□□□□ -0.57
PHGDH-212ENST00000641247 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.46□□□□□ -0.57
PHGDH-212ENST00000641247 RSPH10B2B2RC85 870 aa11.45□□□□□ -0.58
PHGDH-212ENST00000641247 LOC730098B7Z3J9 87 aa11.45□□□□□ -0.58
PHGDH-212ENST00000641247 RNF113AO15541 343 aaKnown RBP11.45□□□□□ -0.58
PHGDH-212ENST00000641247 PDGFBP01127 241 aaPredicted RBP11.45□□□□□ -0.58
PHGDH-212ENST00000641247 GH1P01241 217 aa11.45□□□□□ -0.58
PHGDH-212ENST00000641247 RSPH10BP0C881 870 aa11.45□□□□□ -0.58
PHGDH-212ENST00000641247 CASTP20810 708 aaKnown RBP11.45□□□□□ -0.58
PHGDH-212ENST00000641247 CTDSPL2Q05D32 466 aa11.45□□□□□ -0.58
PHGDH-212ENST00000641247 ADAM15Q13444 863 aa11.45□□□□□ -0.58
PHGDH-212ENST00000641247 KIAA0753Q2KHM9 967 aa11.45□□□□□ -0.58
PHGDH-212ENST00000641247 CCDC96Q2M329 555 aa11.45□□□□□ -0.58
PHGDH-212ENST00000641247 TSHZ3Q63HK5 1081 aa11.45□□□□□ -0.58
PHGDH-212ENST00000641247 KBTBD3Q8NAB2 608 aa11.45□□□□□ -0.58
PHGDH-212ENST00000641247 DNERQ8NFT8 737 aa11.45□□□□□ -0.58
PHGDH-212ENST00000641247 EXOC6Q8TAG9 804 aa11.45□□□□□ -0.58
PHGDH-212ENST00000641247 YME1L1Q96TA2 773 aa11.45□□□□□ -0.58
PHGDH-212ENST00000641247 ZNF287Q9HBT7 754 aa11.45□□□□□ -0.58
PHGDH-212ENST00000641247 GPCPD1Q9NPB8 672 aa11.45□□□□□ -0.58
PHGDH-212ENST00000641247 DDX41Q9UJV9 622 aaKnown RBP11.45□□□□□ -0.58
PHGDH-212ENST00000641247 TRIP12Q14669 1992 aaPredicted RBP11.45□□□□□ -0.58
PHGDH-212ENST00000641247 RAB11FIP3O75154 756 aa11.44□□□□□ -0.58
PHGDH-212ENST00000641247 F2P00734 622 aa11.44□□□□□ -0.58
PHGDH-212ENST00000641247 BMPR1AP36894 532 aa11.44□□□□□ -0.58
PHGDH-212ENST00000641247 THPOP40225 353 aa11.44□□□□□ -0.58
PHGDH-212ENST00000641247 CBX2Q14781 532 aaPredicted RBP11.44□□□□□ -0.58
PHGDH-212ENST00000641247 ADGRD2Q7Z7M1 963 aa11.44□□□□□ -0.58
PHGDH-212ENST00000641247 SUGP1Q8IWZ8 645 aaKnown RBP11.44□□□□□ -0.58
PHGDH-212ENST00000641247 POP1Q99575 1024 aaKnown RBP11.44□□□□□ -0.58
PHGDH-212ENST00000641247 CD207Q9UJ71 328 aa11.44□□□□□ -0.58
PHGDH-212ENST00000641247 ZFHX2Q9C0A1 2572 aaPredicted RBP11.44□□□□□ -0.58
PHGDH-212ENST00000641247 MYH4Q9Y623 1939 aa11.43□□□□□ -0.58
PHGDH-212ENST00000641247 PROB1E7EW31 1015 aa11.43□□□□□ -0.58
PHGDH-212ENST00000641247 C5orf67F2Z3F1 127 aa11.43□□□□□ -0.58
PHGDH-212ENST00000641247 NCK2O43639 380 aa11.43□□□□□ -0.58
PHGDH-212ENST00000641247 SORBS3O60504 671 aa11.43□□□□□ -0.58
PHGDH-212ENST00000641247 EYA4O95677 639 aa11.43□□□□□ -0.58
PHGDH-212ENST00000641247 DNAJB1P25685 340 aa11.43□□□□□ -0.58
PHGDH-212ENST00000641247 DGKDQ16760 1214 aa11.43□□□□□ -0.58
PHGDH-212ENST00000641247 SERINC5Q86VE9 423 aa11.43□□□□□ -0.58
PHGDH-212ENST00000641247 DCAF4Q8WV16 495 aa11.43□□□□□ -0.58
PHGDH-212ENST00000641247 PRRX2Q99811 253 aa11.43□□□□□ -0.58
PHGDH-212ENST00000641247 TMEM47Q9BQJ4 181 aa11.43□□□□□ -0.58
PHGDH-212ENST00000641247 CPVLQ9H3G5 476 aa11.43□□□□□ -0.58
PHGDH-212ENST00000641247 COL4A6Q14031 1691 aa11.43□□□□□ -0.58
PHGDH-212ENST00000641247 TSPY2A6NKD2 308 aa11.42□□□□□ -0.58
PHGDH-212ENST00000641247 ARP10275 920 aa11.42□□□□□ -0.58
PHGDH-212ENST00000641247 CTNNB1P35222 781 aa11.42□□□□□ -0.58
PHGDH-212ENST00000641247 RBM10P98175 930 aaKnown RBP11.42□□□□□ -0.58
PHGDH-212ENST00000641247 PKN1Q16512 942 aa11.42□□□□□ -0.58
PHGDH-212ENST00000641247 SYTL5Q8TDW5 730 aaPredicted RBP11.42□□□□□ -0.58
PHGDH-212ENST00000641247 C16orf70Q9BSU1 422 aa11.42□□□□□ -0.58
PHGDH-212ENST00000641247 FSD1Q9BTV5 496 aa11.42□□□□□ -0.58
PHGDH-212ENST00000641247 BCAS3Q9H6U6 928 aa11.42□□□□□ -0.58
PHGDH-212ENST00000641247 RC3H2Q9HBD1 1191 aaKnown RBP11.42□□□□□ -0.58
PHGDH-212ENST00000641247 PCDHGC5Q9Y5F6 944 aa11.42□□□□□ -0.58
PHGDH-212ENST00000641247 CFAP54Q96N23 3096 aa11.42□□□□□ -0.58
PHGDH-212ENST00000641247 MYO15AQ9UKN7 3530 aa11.42□□□□□ -0.58
PHGDH-212ENST00000641247 EMSYQ7Z589 1322 aa11.41□□□□□ -0.58
PHGDH-212ENST00000641247 TREHO43280 583 aa11.41□□□□□ -0.58
PHGDH-212ENST00000641247 RB1P06400 928 aa11.41□□□□□ -0.58
PHGDH-212ENST00000641247 CTSHP09668 335 aa11.41□□□□□ -0.58
PHGDH-212ENST00000641247 HOXD8P13378 290 aaPredicted RBP11.41□□□□□ -0.58
PHGDH-212ENST00000641247 GNAT2P19087 354 aa11.41□□□□□ -0.58
PHGDH-212ENST00000641247 DEKP35659 375 aaKnown RBP11.41□□□□□ -0.58
PHGDH-212ENST00000641247 SP2Q02086 613 aa11.41□□□□□ -0.58
PHGDH-212ENST00000641247 SIGLEC14Q08ET2 396 aa11.41□□□□□ -0.58
PHGDH-212ENST00000641247 HSDL1Q3SXM5 330 aa11.41□□□□□ -0.58
PHGDH-212ENST00000641247 USH1GQ495M9 461 aa11.41□□□□□ -0.58
PHGDH-212ENST00000641247 FIBCD1Q8N539 461 aa11.41□□□□□ -0.58
PHGDH-212ENST00000641247 EMID1Q96A84 441 aaPredicted RBP11.41□□□□□ -0.58
PHGDH-212ENST00000641247 IL17RAQ96F46 866 aa11.41□□□□□ -0.58
PHGDH-212ENST00000641247 IFIH1Q9BYX4 1025 aaKnown RBP11.41□□□□□ -0.58
PHGDH-212ENST00000641247 LMAN2LQ9H0V9 348 aa11.41□□□□□ -0.58
PHGDH-212ENST00000641247 ECHDC1Q9NTX5 307 aa11.41□□□□□ -0.58
PHGDH-212ENST00000641247 TRPC6Q9Y210 931 aa11.41□□□□□ -0.58
PHGDH-212ENST00000641247 MYO7AQ13402 2215 aa11.41□□□□□ -0.58
PHGDH-212ENST00000641247 C5orf42Q9H799 3197 aa11.4□□□□□ -0.58
PHGDH-212ENST00000641247 DMDP11532 3685 aa11.4□□□□□ -0.58
PHGDH-212ENST00000641247 PRR23AA6NEV1 266 aa11.4□□□□□ -0.58
PHGDH-212ENST00000641247 RANBP6O60518 1105 aaKnown RBP11.4□□□□□ -0.58
PHGDH-212ENST00000641247 GLP2RO95838 553 aa11.4□□□□□ -0.58
PHGDH-212ENST00000641247 PDHBP11177 359 aa11.4□□□□□ -0.58
PHGDH-212ENST00000641247 HOXC8P31273 242 aa11.4□□□□□ -0.58
PHGDH-212ENST00000641247 AAMPQ13685 434 aa11.4□□□□□ -0.58
PHGDH-212ENST00000641247 MYSM1Q5VVJ2 828 aa11.4□□□□□ -0.58
PHGDH-212ENST00000641247 DHX37Q8IY37 1157 aaKnown RBP11.4□□□□□ -0.58
PHGDH-212ENST00000641247 SMRP1Q8NCR6 262 aa11.4□□□□□ -0.58
PHGDH-212ENST00000641247 RGS22Q8NE09 1264 aa11.4□□□□□ -0.58
PHGDH-212ENST00000641247 PPTC7Q8NI37 304 aa11.4□□□□□ -0.58
PHGDH-212ENST00000641247 SEPT8Q92599 483 aa11.4□□□□□ -0.58
PHGDH-212ENST00000641247 CLP1Q92989 425 aaKnown RBP11.4□□□□□ -0.58
PHGDH-212ENST00000641247 ZNF689Q96CS4 500 aaPredicted RBP11.4□□□□□ -0.58
PHGDH-212ENST00000641247 ZFP91Q96JP5 570 aaPredicted RBP11.4□□□□□ -0.58
PHGDH-212ENST00000641247 RPGRIP1Q96KN7 1286 aa11.4□□□□□ -0.58
PHGDH-212ENST00000641247 NAPBQ9H115 298 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms