RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 PRDM1O75626 825 aa13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 TSPY3P0CV98 308 aa13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 TSPY8P0CW00 308 aa13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 ATF7P17544 494 aaPredicted RBP13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 NRIP1P48552 1158 aa13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 RARSP54136 660 aaKnown RBP13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 ZNF200P98182 395 aaPredicted RBP13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 MFSD10Q14728 455 aa13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 KIAA0753Q2KHM9 967 aa13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 SBK1Q52WX2 424 aa13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 ASTLQ6HA08 431 aaPredicted RBP13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 RCSD1Q6JBY9 416 aa13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 RNF207Q6ZRF8 634 aa13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 RBM23Q86U06 439 aaKnown RBP13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 UBALD2Q8IYN6 164 aa13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 KIAA2013Q8IYS2 634 aa13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 DNERQ8NFT8 737 aa13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 FRAT1Q92837 279 aaPredicted RBP13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 WNT8BQ93098 351 aa13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 CLUAP1Q96AJ1 413 aa13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 PLVAPQ9BX97 442 aa13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 MFSD1Q9H3U5 465 aa13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 PAG1Q9NWQ8 432 aa13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 CHD8Q9HCK8 2581 aa13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 MYH8P13535 1937 aa13.02□□□□□ -0.32
PTP4A1-207ENST00000639568 ANP32CO43423 234 aa13.02□□□□□ -0.33
PTP4A1-207ENST00000639568 ARIH2O95376 493 aa13.02□□□□□ -0.33
PTP4A1-207ENST00000639568 TRIM27P14373 513 aa13.02□□□□□ -0.33
PTP4A1-207ENST00000639568 MTMR3Q13615 1198 aa13.02□□□□□ -0.33
PTP4A1-207ENST00000639568 UBE3CQ15386 1083 aa13.02□□□□□ -0.33
PTP4A1-207ENST00000639568 LY6KQ17RY6 165 aa13.02□□□□□ -0.33
PTP4A1-207ENST00000639568 SLC30A10Q6XR72 485 aa13.02□□□□□ -0.33
PTP4A1-207ENST00000639568 KREMEN2Q8NCW0 462 aa13.02□□□□□ -0.33
PTP4A1-207ENST00000639568 BCL11AQ9H165 835 aa13.02□□□□□ -0.33
PTP4A1-207ENST00000639568 IL1RAPL2Q9NP60 686 aa13.02□□□□□ -0.33
PTP4A1-207ENST00000639568 PLAGL2Q9UPG8 496 aa13.02□□□□□ -0.33
PTP4A1-207ENST00000639568 DNAH14Q0VDD8 3507 aa13.02□□□□□ -0.33
PTP4A1-207ENST00000639568 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.01□□□□□ -0.33
PTP4A1-207ENST00000639568 IFIT2P09913 472 aaKnown RBP13.01□□□□□ -0.33
PTP4A1-207ENST00000639568 EDNRBP24530 442 aa13.01□□□□□ -0.33
PTP4A1-207ENST00000639568 BTG3Q14201 252 aaPredicted RBP13.01□□□□□ -0.33
PTP4A1-207ENST00000639568 PPP4R3BQ5MIZ7 849 aa13.01□□□□□ -0.33
PTP4A1-207ENST00000639568 ZSCAN25Q6NSZ9 544 aa13.01□□□□□ -0.33
PTP4A1-207ENST00000639568 SEPT14Q6ZU15 432 aa13.01□□□□□ -0.33
PTP4A1-207ENST00000639568 APBB2Q92870 758 aa13.01□□□□□ -0.33
PTP4A1-207ENST00000639568 CLP1Q92989 425 aaKnown RBP13.01□□□□□ -0.33
PTP4A1-207ENST00000639568 HINFPQ9BQA5 517 aa13.01□□□□□ -0.33
PTP4A1-207ENST00000639568 C1orf115Q9H7X2 142 aa13.01□□□□□ -0.33
PTP4A1-207ENST00000639568 ADGRA3Q8IWK6 1321 aa13.01□□□□□ -0.33
PTP4A1-207ENST00000639568 ZNF286BP0CG31 522 aa13□□□□□ -0.33
PTP4A1-207ENST00000639568 ARHGAP1Q07960 439 aa13□□□□□ -0.33
PTP4A1-207ENST00000639568 CCDC96Q2M329 555 aa13□□□□□ -0.33
PTP4A1-207ENST00000639568 CCDC62Q6P9F0 684 aa13□□□□□ -0.33
PTP4A1-207ENST00000639568 GIMAP6Q6P9H5 292 aa13□□□□□ -0.33
PTP4A1-207ENST00000639568 ADGRD2Q7Z7M1 963 aa13□□□□□ -0.33
PTP4A1-207ENST00000639568 SERINC5Q86VE9 423 aa13□□□□□ -0.33
PTP4A1-207ENST00000639568 CLASRPQ8N2M8 674 aaKnown RBP13□□□□□ -0.33
PTP4A1-207ENST00000639568 MICAL1Q8TDZ2 1067 aa13□□□□□ -0.33
PTP4A1-207ENST00000639568 PUS7LQ9H0K6 701 aaKnown RBP13□□□□□ -0.33
PTP4A1-207ENST00000639568 TLE6Q9H808 572 aa13□□□□□ -0.33
PTP4A1-207ENST00000639568 STX8Q9UNK0 236 aa13□□□□□ -0.33
PTP4A1-207ENST00000639568 MTMR7Q9Y216 660 aa13□□□□□ -0.33
PTP4A1-207ENST00000639568 EXOC6BQ9Y2D4 811 aa13□□□□□ -0.33
PTP4A1-207ENST00000639568 PCDHGC5Q9Y5F6 944 aa13□□□□□ -0.33
PTP4A1-207ENST00000639568 TPRP12270 2363 aaKnown RBP13□□□□□ -0.33
PTP4A1-207ENST00000639568 MYO7AQ13402 2215 aa12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 F2P00734 622 aa12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 LMNAP02545 664 aaKnown RBP12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 SP100P23497 879 aaPredicted RBP12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 TDO2P48775 406 aa12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 CLCN5P51795 746 aa12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 RPS6P62753 249 aaKnown RBP12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 CAMK1Q14012 370 aa12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 ST3GAL2Q16842 350 aa12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 NAALADL2Q58DX5 795 aa12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 HSP90AB4PQ58FF6 505 aa12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 NEDD1Q8NHV4 660 aa12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 ATP6V0A1Q93050 837 aa12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 P2RX5Q93086 422 aa12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 BOLA2Q9H3K6 86 aa12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 SEMA4AQ9H3S1 761 aa12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 TSHZ2Q9NRE2 1034 aa12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 PNMA2Q9UL42 364 aa12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 SORCS3Q9UPU3 1222 aa12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 NR2E1Q9Y466 385 aa12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 TRIP12Q14669 1992 aaPredicted RBP12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 ACACBO00763 2458 aa12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 FRYLO94915 3013 aa12.99□□□□□ -0.33
PTP4A1-207ENST00000639568 FSD2A1L4K1 749 aa12.98□□□□□ -0.33
PTP4A1-207ENST00000639568 C17orf102A2RUQ5 167 aa12.98□□□□□ -0.33
PTP4A1-207ENST00000639568 HAS3O00219 553 aa12.98□□□□□ -0.33
PTP4A1-207ENST00000639568 GLP2RO95838 553 aa12.98□□□□□ -0.33
PTP4A1-207ENST00000639568 APPP05067 770 aa12.98□□□□□ -0.33
PTP4A1-207ENST00000639568 CTSHP09668 335 aa12.98□□□□□ -0.33
PTP4A1-207ENST00000639568 LINC00271P0C7V0 271 aa12.98□□□□□ -0.33
PTP4A1-207ENST00000639568 SRGAP2BP0DMP2 458 aa12.98□□□□□ -0.33
PTP4A1-207ENST00000639568 TFAP4Q01664 338 aa12.98□□□□□ -0.33
PTP4A1-207ENST00000639568 LAMC2Q13753 1193 aa12.98□□□□□ -0.33
PTP4A1-207ENST00000639568 PPTC7Q8NI37 304 aa12.98□□□□□ -0.33
PTP4A1-207ENST00000639568 SUSD6Q92537 303 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms