RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 SMTNP53814 917 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 EPM2AIP1Q7L775 607 aaPredicted RBP11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 NANOGNBQ7Z5D8 188 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 HORMAD1Q86X24 394 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 TRIM59Q8IWR1 403 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 ZBED2Q9BTP6 218 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 MRPL44Q9H9J2 332 aaKnown RBP11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 CCDC87Q9NVE4 849 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 CAB39Q9Y376 341 aaPredicted RBP11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 RNF103-CHMP3A0A140T963 221 aa11.77□□□□□ -0.52
KCNMA1-259ENST00000639406 MAGEA13PA6NCF6 341 aa11.77□□□□□ -0.52
KCNMA1-259ENST00000639406 GTPBP6O43824 516 aaPredicted RBP11.77□□□□□ -0.52
KCNMA1-259ENST00000639406 ACSL3O95573 720 aa11.77□□□□□ -0.52
KCNMA1-259ENST00000639406 KRT7P08729 469 aa11.77□□□□□ -0.52
KCNMA1-259ENST00000639406 CCDC85BQ15834 202 aaPredicted RBP11.77□□□□□ -0.52
KCNMA1-259ENST00000639406 RFWD2Q8NHY2 731 aa11.77□□□□□ -0.52
KCNMA1-259ENST00000639406 CCT8L2Q96SF2 557 aa11.77□□□□□ -0.52
KCNMA1-259ENST00000639406 APOBEC2Q9Y235 224 aaKnown RBP11.77□□□□□ -0.52
KCNMA1-259ENST00000639406 FIS1Q9Y3D6 152 aa11.77□□□□□ -0.52
KCNMA1-259ENST00000639406 BZW2Q9Y6E2 419 aaKnown RBP11.77□□□□□ -0.52
KCNMA1-259ENST00000639406 COBLO75128 1261 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 PPP1R37O75864 691 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 ST13P50502 369 aaKnown RBP11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 HADHQ16836 314 aaKnown RBP11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 TMC5Q6UXY8 1006 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 NME9Q86XW9 330 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 MAGEB6Q8N7X4 407 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 CLIC6Q96NY7 704 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 KLHL25Q9H0H3 589 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 ARHGAP26Q9UNA1 814 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 SESN1Q9Y6P5 492 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 SSH2Q76I76 1423 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 MESDQ14696 234 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 FSCBQ5H9T9 825 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 SARM1Q6SZW1 724 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 CCDC80Q76M96 950 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 RETREG2Q8NC44 543 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 GIPC2Q8TF65 315 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 COG1Q8WTW3 980 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 CNOT6LQ96LI5 555 aaKnown RBP11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 GPR101Q96P66 508 aaPredicted RBP11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 ASXL1Q8IXJ9 1541 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 TNRQ92752 1358 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 H0Y626 953 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 AP1G2O75843 785 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 NPR1P16066 1061 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 CNGA3Q16281 694 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 MYOCDQ8IZQ8 938 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 MYCT1Q8N699 235 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 TUBGCP2Q9BSJ2 902 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 POLE3Q9NRF9 147 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 PHF8Q9UPP1 1060 aa11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.77□□□□□ -0.53
KCNMA1-259ENST00000639406 A0A087WWV3 80 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 IQANK1A0A1B0GTG1 560 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 FAM200BP0CF97 657 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 ACTN1P12814 892 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 GPTP24298 496 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 ZFATQ9P243 1243 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 GGT7Q9UJ14 662 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 TRPC6Q9Y210 931 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 SKAP2O75563 359 aaPredicted RBP11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 CAPN1P07384 714 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 USP14P54578 494 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 PLA2G4DQ86XP0 818 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 AGGF1Q8N302 714 aaeCLIP11.76□□□□□ -0.536e-8■■■■■ 28.7
KCNMA1-259ENST00000639406 C19orf44Q9H6X5 657 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 MRPL40Q9NQ50 206 aaKnown RBP11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 TTLL3Q9Y4R7 772 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 ZMYM4Q5VZL5 1548 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 STAM2O75886 525 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 SEC24DO94855 1032 aaPredicted RBP11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 HSPA6P17066 643 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 ARFIP2P53365 341 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 CEP78Q5JTW2 689 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 TTBK2Q6IQ55 1244 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 SNX25Q9H3E2 840 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 CFAP69A5D8W1 941 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 CTIFO43310 598 aaKnown RBP11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 PGM1P36871 562 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 TBL3Q12788 808 aaKnown RBP11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 CYB5D1Q6P9G0 228 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 TSPYL6Q8N831 410 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 PCDHB13Q9Y5F0 798 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 STK24Q9Y6E0 443 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 WDR47O94967 919 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 TMPRSS15P98073 1019 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 KIRREL3Q8IZU9 778 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 TTC17Q96AE7 1141 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 GRAMD1AQ96CP6 724 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 NUDT16Q96DE0 195 aaKnown RBP11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 DCTN4Q9UJW0 460 aa11.76□□□□□ -0.53
KCNMA1-259ENST00000639406 RASA4BC9J798 803 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 RASA4O43374 803 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 DEFA1P59665 94 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 DEFA3P59666 94 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 DDB1Q16531 1140 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 MIGA1Q8NAN2 632 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 MCUQ8NE86 351 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 SEC16BQ96JE7 1060 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms