RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 SORBS3O60504 671 aa23.2■■□□□ 1.3
CLN6-222ENST00000637667 PPFIA4O75335 1185 aa23.2■■□□□ 1.3
CLN6-222ENST00000637667 GNAQP50148 359 aa23.2■■□□□ 1.3
CLN6-222ENST00000637667 SP2Q02086 613 aa23.2■■□□□ 1.3
CLN6-222ENST00000637667 NECTIN1Q15223 517 aa23.2■■□□□ 1.3
CLN6-222ENST00000637667 BMP2KLQ5H9B9 411 aa23.2■■□□□ 1.3
CLN6-222ENST00000637667 GPKOWQ92917 476 aaPredicted RBP eCLIP23.2■■□□□ 1.3
CLN6-222ENST00000637667 GAS2L1Q99501 681 aaPredicted RBP23.2■■□□□ 1.3
CLN6-222ENST00000637667 PRDM12Q9H4Q4 367 aa23.2■■□□□ 1.3
CLN6-222ENST00000637667 SLC28A3Q9HAS3 691 aa23.2■■□□□ 1.3
CLN6-222ENST00000637667 PRUNE2Q8WUY3 3088 aa23.2■■□□□ 1.3
CLN6-222ENST00000637667 HAS3O00219 553 aa23.19■■□□□ 1.3
CLN6-222ENST00000637667 KIAA0753Q2KHM9 967 aa23.19■■□□□ 1.3
CLN6-222ENST00000637667 HSDL1Q3SXM5 330 aa23.19■■□□□ 1.3
CLN6-222ENST00000637667 CENPQQ7L2Z9 268 aaPredicted RBP23.19■■□□□ 1.3
CLN6-222ENST00000637667 AFAP1L1Q8TED9 768 aa23.19■■□□□ 1.3
CLN6-222ENST00000637667 DHX38Q92620 1227 aaKnown RBP23.19■■□□□ 1.3
CLN6-222ENST00000637667 FTOQ9C0B1 505 aaKnown RBP eCLIP23.19■■□□□ 1.3
CLN6-222ENST00000637667 SEC63Q9UGP8 760 aaKnown RBP23.19■■□□□ 1.3
CLN6-222ENST00000637667 PCDHA11Q9Y5I1 949 aa23.19■■□□□ 1.3
CLN6-222ENST00000637667 EYSQ5T1H1 3165 aa23.18■■□□□ 1.3
CLN6-222ENST00000637667 PLEKHA8P1O95397 391 aa23.18■■□□□ 1.3
CLN6-222ENST00000637667 LIFRP42702 1097 aa23.18■■□□□ 1.3
CLN6-222ENST00000637667 SKAP1Q86WV1 359 aa23.18■■□□□ 1.3
CLN6-222ENST00000637667 SRBD1Q8N5C6 995 aaKnown RBP23.18■■□□□ 1.3
CLN6-222ENST00000637667 MLXIPQ9HAP2 919 aa23.18■■□□□ 1.3
CLN6-222ENST00000637667 SCN5AQ14524 2016 aa23.17■■□□□ 1.3
CLN6-222ENST00000637667 STAM2O75886 525 aa23.17■■□□□ 1.3
CLN6-222ENST00000637667 CALM1P0DP23 149 aa23.17■■□□□ 1.3
CLN6-222ENST00000637667 CALM2P0DP24 149 aa23.17■■□□□ 1.3
CLN6-222ENST00000637667 CALM3P0DP25 149 aa23.17■■□□□ 1.3
CLN6-222ENST00000637667 MYOGP15173 224 aa23.17■■□□□ 1.3
CLN6-222ENST00000637667 SELPP16109 830 aa23.17■■□□□ 1.3
CLN6-222ENST00000637667 RXRAP19793 462 aa23.17■■□□□ 1.3
CLN6-222ENST00000637667 MRPS9P82933 396 aaKnown RBP23.17■■□□□ 1.3
CLN6-222ENST00000637667 RBL2Q08999 1139 aa23.17■■□□□ 1.3
CLN6-222ENST00000637667 GNPTABQ3T906 1256 aa23.17■■□□□ 1.3
CLN6-222ENST00000637667 USP38Q8NB14 1042 aa23.17■■□□□ 1.3
CLN6-222ENST00000637667 CUL5Q93034 780 aa23.17■■□□□ 1.3
CLN6-222ENST00000637667 INPP4AQ96PE3 977 aaPredicted RBP23.17■■□□□ 1.3
CLN6-222ENST00000637667 COL25A1Q9BXS0 654 aaPredicted RBP23.17■■□□□ 1.3
CLN6-222ENST00000637667 PIK3CDO00329 1044 aa23.16■■□□□ 1.3
CLN6-222ENST00000637667 ICAM3P32942 547 aa23.16■■□□□ 1.3
CLN6-222ENST00000637667 PPP2R2DQ66LE6 453 aa23.16■■□□□ 1.3
CLN6-222ENST00000637667 USP17L6PQ6QN14 398 aa23.16■■□□□ 1.3
CLN6-222ENST00000637667 LRRC8DQ7L1W4 858 aa23.16■■□□□ 1.3
CLN6-222ENST00000637667 SMARCC2Q8TAQ2 1214 aa23.16■■□□□ 1.3
CLN6-222ENST00000637667 SLC9A7Q96T83 725 aa23.16■■□□□ 1.3
CLN6-222ENST00000637667 LRRC2Q9BYS8 371 aa23.16■■□□□ 1.3
CLN6-222ENST00000637667 SLC12A7Q9Y666 1083 aa23.16■■□□□ 1.3
CLN6-222ENST00000637667 TET1Q8NFU7 2136 aa23.15■■□□□ 1.3
CLN6-222ENST00000637667 PTK7Q13308 1070 aa23.15■■□□□ 1.3
CLN6-222ENST00000637667 ADGRE1Q14246 886 aa23.15■■□□□ 1.3
CLN6-222ENST00000637667 GPNMBQ14956 572 aa23.15■■□□□ 1.3
CLN6-222ENST00000637667 RAB11FIP4Q86YS3 637 aa23.15■■□□□ 1.3
CLN6-222ENST00000637667 CMTR1Q8N1G2 835 aaKnown RBP23.15■■□□□ 1.3
CLN6-222ENST00000637667 PHOSPHO2Q8TCD6 241 aa23.15■■□□□ 1.3
CLN6-222ENST00000637667 C16orf70Q9BSU1 422 aa23.15■■□□□ 1.3
CLN6-222ENST00000637667 BCAS3Q9H6U6 928 aa23.15■■□□□ 1.3
CLN6-222ENST00000637667 RTEL1Q9NZ71 1219 aa23.15■■□□□ 1.3
CLN6-222ENST00000637667 TANC1Q9C0D5 1861 aa23.14■■□□□ 1.29
CLN6-222ENST00000637667 SPATA31C2B4DYI2 1134 aa23.14■■□□□ 1.29
CLN6-222ENST00000637667 MEIS2O14770 477 aa23.14■■□□□ 1.29
CLN6-222ENST00000637667 BAIAP3O94812 1187 aa23.14■■□□□ 1.29
CLN6-222ENST00000637667 PARNO95453 639 aaKnown RBP23.14■■□□□ 1.29
CLN6-222ENST00000637667 CKBP12277 381 aa23.14■■□□□ 1.29
CLN6-222ENST00000637667 ZNF200P98182 395 aaPredicted RBP23.14■■□□□ 1.29
CLN6-222ENST00000637667 SEMA3FQ13275 785 aa23.14■■□□□ 1.29
CLN6-222ENST00000637667 RNF20Q5VTR2 975 aa23.14■■□□□ 1.29
CLN6-222ENST00000637667 XRRA1Q6P2D8 792 aa23.14■■□□□ 1.29
CLN6-222ENST00000637667 CHD7Q9P2D1 2997 aa23.14■■□□□ 1.29
CLN6-222ENST00000637667 TRIP12Q14669 1992 aaPredicted RBP23.13■■□□□ 1.29
CLN6-222ENST00000637667 NOP56O00567 594 aaKnown RBP23.13■■□□□ 1.29
CLN6-222ENST00000637667 FIBPO43427 364 aa23.13■■□□□ 1.29
CLN6-222ENST00000637667 NEDD9Q14511 834 aa23.13■■□□□ 1.29
CLN6-222ENST00000637667 TRIM71Q2Q1W2 868 aaKnown RBP23.13■■□□□ 1.29
CLN6-222ENST00000637667 PCNX4Q63HM2 1172 aa23.13■■□□□ 1.29
CLN6-222ENST00000637667 METTL7BQ6UX53 244 aa23.13■■□□□ 1.29
CLN6-222ENST00000637667 SGMS1Q86VZ5 419 aa23.13■■□□□ 1.29
CLN6-222ENST00000637667 FANCBQ8NB91 859 aa23.13■■□□□ 1.29
CLN6-222ENST00000637667 MYH7BA7E2Y1 1941 aa23.13■■□□□ 1.29
CLN6-222ENST00000637667 H3BRB1 525 aa23.12■■□□□ 1.29
CLN6-222ENST00000637667 CXCL10P02778 98 aa23.12■■□□□ 1.29
CLN6-222ENST00000637667 LGALS2P05162 132 aa23.12■■□□□ 1.29
CLN6-222ENST00000637667 HIC1Q14526 733 aa23.12■■□□□ 1.29
CLN6-222ENST00000637667 TMTC3Q6ZXV5 915 aa23.12■■□□□ 1.29
CLN6-222ENST00000637667 CYFIP1Q7L576 1253 aa23.12■■□□□ 1.29
CLN6-222ENST00000637667 MICU3Q86XE3 530 aa23.12■■□□□ 1.29
CLN6-222ENST00000637667 HERC6Q8IVU3 1022 aa23.12■■□□□ 1.29
CLN6-222ENST00000637667 WNT8BQ93098 351 aa23.12■■□□□ 1.29
CLN6-222ENST00000637667 TUT1Q9H6E5 874 aaKnown RBP23.12■■□□□ 1.29
CLN6-222ENST00000637667 PSTPIP2Q9H939 334 aa23.12■■□□□ 1.29
CLN6-222ENST00000637667 hCG_1642624A0A1W2PR95 340 aa23.11■■□□□ 1.29
CLN6-222ENST00000637667 NBNO60934 754 aa23.11■■□□□ 1.29
CLN6-222ENST00000637667 CA3P07451 260 aa23.11■■□□□ 1.29
CLN6-222ENST00000637667 IGFBP4P22692 258 aa23.11■■□□□ 1.29
CLN6-222ENST00000637667 KCNJ6P48051 423 aa23.11■■□□□ 1.29
CLN6-222ENST00000637667 TRAF7Q6Q0C0 670 aa23.11■■□□□ 1.29
CLN6-222ENST00000637667 CCDC82Q8N4S0 544 aa23.11■■□□□ 1.29
CLN6-222ENST00000637667 PPM1EQ8WY54 764 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms