RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 PALM3A6NDB9 673 aaPredicted RBP22.02■■□□□ 1.12
SMN2-215ENST00000628696 HAS3O00219 553 aa22.02■■□□□ 1.12
SMN2-215ENST00000628696 GGPS1O95749 300 aa22.02■■□□□ 1.12
SMN2-215ENST00000628696 F2P00734 622 aa22.02■■□□□ 1.12
SMN2-215ENST00000628696 RBL2Q08999 1139 aa22.02■■□□□ 1.12
SMN2-215ENST00000628696 PTK7Q13308 1070 aa22.02■■□□□ 1.12
SMN2-215ENST00000628696 GRB10Q13322 594 aa22.02■■□□□ 1.12
SMN2-215ENST00000628696 MYSM1Q5VVJ2 828 aa22.02■■□□□ 1.12
SMN2-215ENST00000628696 KCNV1Q6PIU1 500 aa22.02■■□□□ 1.12
SMN2-215ENST00000628696 STOX1Q6ZVD7 989 aa22.02■■□□□ 1.12
SMN2-215ENST00000628696 MTMR8Q96EF0 704 aa22.02■■□□□ 1.12
SMN2-215ENST00000628696 MAP3K20Q9NYL2 800 aaKnown RBP22.02■■□□□ 1.12
SMN2-215ENST00000628696 REV3LO60673 3130 aa22.02■■□□□ 1.12
SMN2-215ENST00000628696 MUC3AQ02505 3323 aa22.02■■□□□ 1.12
SMN2-215ENST00000628696 ABHD14A-ACY1A0A1B0GW23 586 aa22.01■■□□□ 1.11
SMN2-215ENST00000628696 RBAK-RBAKDNI3L0D1 243 aa22.01■■□□□ 1.11
SMN2-215ENST00000628696 PPFIA4O75335 1185 aa22.01■■□□□ 1.11
SMN2-215ENST00000628696 RGS20O76081 388 aa22.01■■□□□ 1.11
SMN2-215ENST00000628696 CXCL10P02778 98 aa22.01■■□□□ 1.11
SMN2-215ENST00000628696 PGM5Q15124 567 aa22.01■■□□□ 1.11
SMN2-215ENST00000628696 TCTN1Q2MV58 587 aa22.01■■□□□ 1.11
SMN2-215ENST00000628696 CELF3Q5SZQ8 465 aaKnown RBP22.01■■□□□ 1.11
SMN2-215ENST00000628696 ZNF618Q5T7W0 954 aa22.01■■□□□ 1.11
SMN2-215ENST00000628696 FAM117BQ6P1L5 589 aa22.01■■□□□ 1.11
SMN2-215ENST00000628696 VSIG10LQ86VR7 867 aa22.01■■□□□ 1.11
SMN2-215ENST00000628696 FCHSD1Q86WN1 690 aa22.01■■□□□ 1.11
SMN2-215ENST00000628696 IL31RAQ8NI17 732 aa22.01■■□□□ 1.11
SMN2-215ENST00000628696 PIGSQ96S52 555 aa22.01■■□□□ 1.11
SMN2-215ENST00000628696 TRANK1O15050 2925 aa22.01■■□□□ 1.11
SMN2-215ENST00000628696 GCOM1H8Y6P7 765 aaPredicted RBP22■■□□□ 1.11
SMN2-215ENST00000628696 IFIT3O14879 490 aaKnown RBP22■■□□□ 1.11
SMN2-215ENST00000628696 POLR2MP0CAP2 368 aa22■■□□□ 1.11
SMN2-215ENST00000628696 CCND2P30279 289 aa22■■□□□ 1.11
SMN2-215ENST00000628696 GHRHRQ02643 423 aa22■■□□□ 1.11
SMN2-215ENST00000628696 IKBKEQ14164 716 aa22■■□□□ 1.11
SMN2-215ENST00000628696 GRM4Q14833 912 aa22■■□□□ 1.11
SMN2-215ENST00000628696 HSDL1Q3SXM5 330 aa22■■□□□ 1.11
SMN2-215ENST00000628696 WNT8BQ93098 351 aa22■■□□□ 1.11
SMN2-215ENST00000628696 MLXIPQ9HAP2 919 aa22■■□□□ 1.11
SMN2-215ENST00000628696 MTUS1Q9ULD2 1270 aa22■■□□□ 1.11
SMN2-215ENST00000628696 COG5Q9UP83 839 aa22■■□□□ 1.11
SMN2-215ENST00000628696 ERICH2A1L162 156 aa21.99■■□□□ 1.11
SMN2-215ENST00000628696 SP2Q02086 613 aa21.99■■□□□ 1.11
SMN2-215ENST00000628696 TRAF1Q13077 416 aa21.99■■□□□ 1.11
SMN2-215ENST00000628696 TRIM71Q2Q1W2 868 aaKnown RBP21.99■■□□□ 1.11
SMN2-215ENST00000628696 SAMD3Q8N6K7 520 aa21.99■■□□□ 1.11
SMN2-215ENST00000628696 GPKOWQ92917 476 aaPredicted RBP eCLIP21.99■■□□□ 1.11
SMN2-215ENST00000628696 RAD9AQ99638 391 aa21.99■■□□□ 1.11
SMN2-215ENST00000628696 COL4A4P53420 1690 aaPredicted RBP21.98■■□□□ 1.11
SMN2-215ENST00000628696 LPXNO60711 386 aa21.98■■□□□ 1.11
SMN2-215ENST00000628696 GJB5O95377 273 aa21.98■■□□□ 1.11
SMN2-215ENST00000628696 HOXD8P13378 290 aaPredicted RBP21.98■■□□□ 1.11
SMN2-215ENST00000628696 UBA1P22314 1058 aaKnown RBP21.98■■□□□ 1.11
SMN2-215ENST00000628696 HIC1Q14526 733 aa21.98■■□□□ 1.11
SMN2-215ENST00000628696 SLC35G1Q2M3R5 365 aa21.98■■□□□ 1.11
SMN2-215ENST00000628696 GDPD5Q8WTR4 605 aa21.98■■□□□ 1.11
SMN2-215ENST00000628696 HLA-CQ95604 372 aa21.98■■□□□ 1.11
SMN2-215ENST00000628696 RIOX1Q9H6W3 641 aa21.98■■□□□ 1.11
SMN2-215ENST00000628696 SENP2Q9HC62 589 aa21.98■■□□□ 1.11
SMN2-215ENST00000628696 RAPGEFL1Q9UHV5 662 aa21.98■■□□□ 1.11
SMN2-215ENST00000628696 U3KPZ7 1027 aaPredicted RBP21.98■■□□□ 1.11
SMN2-215ENST00000628696 EFCAB14O75071 495 aa21.97■■□□□ 1.11
SMN2-215ENST00000628696 CYP21A2P08686 494 aa21.97■■□□□ 1.11
SMN2-215ENST00000628696 TGFB3P10600 412 aa21.97■■□□□ 1.11
SMN2-215ENST00000628696 THPOP40225 353 aa21.97■■□□□ 1.11
SMN2-215ENST00000628696 PTH1RQ03431 593 aa21.97■■□□□ 1.11
SMN2-215ENST00000628696 MBTPS1Q14703 1052 aa21.97■■□□□ 1.11
SMN2-215ENST00000628696 TTC22Q5TAA0 569 aa21.97■■□□□ 1.11
SMN2-215ENST00000628696 TRAF7Q6Q0C0 670 aa21.97■■□□□ 1.11
SMN2-215ENST00000628696 RALYLQ86SE5 291 aaKnown RBP21.97■■□□□ 1.11
SMN2-215ENST00000628696 RUFY2Q8WXA3 655 aa21.97■■□□□ 1.11
SMN2-215ENST00000628696 PIBF1Q8WXW3 757 aa21.97■■□□□ 1.11
SMN2-215ENST00000628696 C16orf70Q9BSU1 422 aa21.97■■□□□ 1.11
SMN2-215ENST00000628696 BDP1A6H8Y1 2624 aa21.96■■□□□ 1.11
SMN2-215ENST00000628696 RSPH10B2B2RC85 870 aa21.96■■□□□ 1.11
SMN2-215ENST00000628696 LGR5O75473 907 aa21.96■■□□□ 1.11
SMN2-215ENST00000628696 RSPH10BP0C881 870 aa21.96■■□□□ 1.11
SMN2-215ENST00000628696 GSPT1P15170 499 aaKnown RBP21.96■■□□□ 1.11
SMN2-215ENST00000628696 PDE4AP27815 886 aa21.96■■□□□ 1.11
SMN2-215ENST00000628696 WTAPQ15007 396 aa21.96■■□□□ 1.11
SMN2-215ENST00000628696 TGS1Q96RS0 853 aaKnown RBP21.96■■□□□ 1.11
SMN2-215ENST00000628696 DOCK5Q9H7D0 1870 aa21.96■■□□□ 1.11
SMN2-215ENST00000628696 PNMA6FA0A0J9YX94 578 aa21.95■■□□□ 1.1
SMN2-215ENST00000628696 C17orf102A2RUQ5 167 aa21.95■■□□□ 1.1
SMN2-215ENST00000628696 H3BRB1 525 aa21.95■■□□□ 1.1
SMN2-215ENST00000628696 CYTH3O43739 400 aa21.95■■□□□ 1.1
SMN2-215ENST00000628696 SART3Q15020 963 aaKnown RBP21.95■■□□□ 1.1
SMN2-215ENST00000628696 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.95■■□□□ 1.1
SMN2-215ENST00000628696 DBF4BQ8NFT6 615 aa21.95■■□□□ 1.1
SMN2-215ENST00000628696 ATP6V0A1Q93050 837 aa21.95■■□□□ 1.1
SMN2-215ENST00000628696 TUT1Q9H6E5 874 aaKnown RBP21.95■■□□□ 1.1
SMN2-215ENST00000628696 BCAS3Q9H6U6 928 aa21.95■■□□□ 1.1
SMN2-215ENST00000628696 SUGCTQ9HAC7 445 aa21.95■■□□□ 1.1
SMN2-215ENST00000628696 LINC01553A4QN01 128 aa21.94■■□□□ 1.1
SMN2-215ENST00000628696 NOP56O00567 594 aaKnown RBP21.94■■□□□ 1.1
SMN2-215ENST00000628696 ERVK-21P61565 698 aa21.94■■□□□ 1.1
SMN2-215ENST00000628696 GNPTABQ3T906 1256 aa21.94■■□□□ 1.1
SMN2-215ENST00000628696 SERINC5Q86VE9 423 aa21.94■■□□□ 1.1
SMN2-215ENST00000628696 NCOA7Q8NI08 942 aa21.94■■□□□ 1.1
SMN2-215ENST00000628696 EMSYQ7Z589 1322 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms