RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 UBASH3AP57075 661 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 MYSM1Q5VVJ2 828 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 PAWRQ96IZ0 340 aaKnown RBP6.8□□□□□ -1.32
CDKL5-205ENST00000623535 MYCBPQ99417 103 aaPredicted RBP6.8□□□□□ -1.32
CDKL5-205ENST00000623535 NLNQ9BYT8 704 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 PCDHGB3Q9Y5G1 929 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 KRT14P02533 472 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 TUBB4AP04350 444 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 TMED2Q15363 201 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 AAK1Q2M2I8 961 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 SLFN12LQ6IEE8 588 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 ZNF274Q96GC6 653 aaPredicted RBP6.8□□□□□ -1.32
CDKL5-205ENST00000623535 FAM49AQ9H0Q0 323 aaPredicted RBP6.8□□□□□ -1.32
CDKL5-205ENST00000623535 SNX2O60749 519 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 SUPT20HL2P0C7V6 817 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 FDX1P10109 184 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 XRCC5P13010 732 aaKnown RBP6.8□□□□□ -1.32
CDKL5-205ENST00000623535 SYTL3Q4VX76 610 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 TMEM169Q96HH4 297 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 INTS4Q96HW7 963 aaKnown RBP6.8□□□□□ -1.32
CDKL5-205ENST00000623535 HUNKP57058 714 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 FAM47EQ6ZV65 393 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 MAPKAPK5Q8IW41 473 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 ZNF248Q8NDW4 579 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 HELBQ8NG08 1087 aaPredicted RBP6.8□□□□□ -1.32
CDKL5-205ENST00000623535 EXOC6Q8TAG9 804 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 GMCL1Q96IK5 515 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 E5RI56 91 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 ZBTB7AO95365 584 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 CETPP11597 493 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 HPCAP84074 193 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 RASSF7Q02833 373 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 THNSL1Q8IYQ7 743 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 RILPQ96NA2 401 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 TRIM55Q9BYV6 548 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 DNAJC11Q9NVH1 559 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 RAD17O75943 681 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 C9orf131Q5VYM1 1079 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 GLMNQ92990 594 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 LARP6Q9BRS8 491 aaKnown RBP6.8□□□□□ -1.32
CDKL5-205ENST00000623535 GCOM2Q9BZD3 368 aaPredicted RBP6.8□□□□□ -1.32
CDKL5-205ENST00000623535 CARD9Q9H257 536 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 ATP10DQ9P241 1426 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 MFN1Q8IWA4 741 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 DNAAF3Q8N9W5 541 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 WDR11Q9BZH6 1224 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 DNAJC17Q9NVM6 304 aaKnown RBP6.8□□□□□ -1.32
CDKL5-205ENST00000623535 LRWD1Q9UFC0 647 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 ARHGAP42A6NI28 874 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 SFI1A8K8P3 1242 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 SERPINB2P05120 415 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 TBC1D9Q6ZT07 1266 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 PLA2G4DQ86XP0 818 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 RIN2Q8WYP3 895 aaPredicted RBP6.79□□□□□ -1.32
CDKL5-205ENST00000623535 DNAJC1Q96KC8 554 aaKnown RBP6.79□□□□□ -1.32
CDKL5-205ENST00000623535 NOC4LQ9BVI4 516 aaKnown RBP6.79□□□□□ -1.32
CDKL5-205ENST00000623535 FSD1LQ9BXM9 530 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 CHCHD3Q9NX63 227 aaKnown RBP6.79□□□□□ -1.32
CDKL5-205ENST00000623535 NCKAP1Q9Y2A7 1128 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 ANKRD36BQ8N2N9 1353 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 GOLGA8RI6L899 631 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 HACD3Q9P035 362 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 PCDHGB4Q9UN71 923 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 RASSF2P50749 326 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.79□□□□□ -1.32
CDKL5-205ENST00000623535 PDZD8Q8NEN9 1154 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 NUDT12Q9BQG2 462 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 LCMT1Q9UIC8 334 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 NSFP46459 744 aaKnown RBP6.79□□□□□ -1.32
CDKL5-205ENST00000623535 USP17L2Q6R6M4 530 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 C1QTNF7Q9BXJ2 289 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 TMEM232C9JQI7 657 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 KRT7P08729 469 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 ZC3H12BQ5HYM0 836 aaKnown RBP6.79□□□□□ -1.32
CDKL5-205ENST00000623535 RWDD4Q6NW29 188 aaKnown RBP6.79□□□□□ -1.32
CDKL5-205ENST00000623535 ZSCAN1Q8NBB4 408 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 DNMBPQ6XZF7 1577 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 CFAP99D6REC4 459 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 RAG1P15918 1043 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 ATP11AP98196 1134 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 CENPCQ03188 943 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 PTK2Q05397 1052 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 SRSF11Q05519 484 aaKnown RBP6.79□□□□□ -1.32
CDKL5-205ENST00000623535 ADCY1Q08828 1119 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 DOK7Q18PE1 504 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 Q9H521 79 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 KANSL2Q9H9L4 492 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 TYW1Q9NV66 732 aaKnown RBP6.79□□□□□ -1.32
CDKL5-205ENST00000623535 GALNT8Q9NY28 637 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 TADA2AO75478 443 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 PDIA3P30101 505 aaKnown RBP6.79□□□□□ -1.32
CDKL5-205ENST00000623535 TXKP42681 527 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 CPT1AP50416 773 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 KPNA1P52294 538 aaPredicted RBP6.79□□□□□ -1.32
CDKL5-205ENST00000623535 SLC39A6Q13433 755 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 MCUQ8NE86 351 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 OSBP2Q969R2 916 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 CACNA2D2Q9NY47 1150 aa6.79□□□□□ -1.32
CDKL5-205ENST00000623535 DBR1Q9UK59 544 aaKnown RBP6.79□□□□□ -1.32
CDKL5-205ENST00000623535 KCNH3Q9ULD8 1083 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms