RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 SEMA3FQ13275 785 aa19.78■□□□□ 0.76
HMGN3-203ENST00000620514 PTGISQ16647 500 aa19.78■□□□□ 0.76
HMGN3-203ENST00000620514 SYNE3Q6ZMZ3 975 aa19.78■□□□□ 0.76
HMGN3-203ENST00000620514 DEFB128Q7Z7B8 93 aa19.78■□□□□ 0.76
HMGN3-203ENST00000620514 HDAC6Q9UBN7 1215 aa19.78■□□□□ 0.76
HMGN3-203ENST00000620514 NOD1Q9Y239 953 aa19.78■□□□□ 0.76
HMGN3-203ENST00000620514 COL6A3P12111 3177 aa19.78■□□□□ 0.76
HMGN3-203ENST00000620514 SCN5AQ14524 2016 aa19.77■□□□□ 0.76
HMGN3-203ENST00000620514 F2P00734 622 aa19.77■□□□□ 0.76
HMGN3-203ENST00000620514 TGFB3P10600 412 aa19.77■□□□□ 0.76
HMGN3-203ENST00000620514 HOXD8P13378 290 aaPredicted RBP19.77■□□□□ 0.76
HMGN3-203ENST00000620514 KRT32Q14532 448 aa19.77■□□□□ 0.76
HMGN3-203ENST00000620514 MFSD10Q14728 455 aa19.77■□□□□ 0.76
HMGN3-203ENST00000620514 SESTD1Q86VW0 696 aa19.77■□□□□ 0.76
HMGN3-203ENST00000620514 RPUSD2Q8IZ73 545 aaKnown RBP19.77■□□□□ 0.76
HMGN3-203ENST00000620514 SLC17A8Q8NDX2 589 aa19.77■□□□□ 0.76
HMGN3-203ENST00000620514 MYLIPQ8WY64 445 aa19.77■□□□□ 0.76
HMGN3-203ENST00000620514 INPP4AQ96PE3 977 aaPredicted RBP19.77■□□□□ 0.76
HMGN3-203ENST00000620514 PBX4Q9BYU1 374 aa19.77■□□□□ 0.76
HMGN3-203ENST00000620514 PSTPIP2Q9H939 334 aa19.77■□□□□ 0.76
HMGN3-203ENST00000620514 MLXIPQ9HAP2 919 aa19.77■□□□□ 0.76
HMGN3-203ENST00000620514 CNTNAP5Q8WYK1 1306 aa19.76■□□□□ 0.75
HMGN3-203ENST00000620514 HAS3O00219 553 aa19.76■□□□□ 0.75
HMGN3-203ENST00000620514 ICAM3P32942 547 aa19.76■□□□□ 0.75
HMGN3-203ENST00000620514 UBE2SQ16763 222 aa19.76■□□□□ 0.75
HMGN3-203ENST00000620514 KIAA0753Q2KHM9 967 aa19.76■□□□□ 0.75
HMGN3-203ENST00000620514 GNPTABQ3T906 1256 aa19.76■□□□□ 0.75
HMGN3-203ENST00000620514 HEATR3Q7Z4Q2 680 aa19.76■□□□□ 0.75
HMGN3-203ENST00000620514 DHX38Q92620 1227 aaKnown RBP19.76■□□□□ 0.75
HMGN3-203ENST00000620514 KCNB2Q92953 911 aa19.76■□□□□ 0.75
HMGN3-203ENST00000620514 TIFAQ96CG3 184 aa19.76■□□□□ 0.75
HMGN3-203ENST00000620514 TMEM265A0A087WTH1 108 aa19.75■□□□□ 0.75
HMGN3-203ENST00000620514 KLF18A0A0U1RQI7 1052 aa19.75■□□□□ 0.75
HMGN3-203ENST00000620514 SPATA31C2B4DYI2 1134 aa19.75■□□□□ 0.75
HMGN3-203ENST00000620514 RBAK-RBAKDNI3L0D1 243 aa19.75■□□□□ 0.75
HMGN3-203ENST00000620514 PITPNM1O00562 1244 aa19.75■□□□□ 0.75
HMGN3-203ENST00000620514 ZBTB43O43298 467 aa19.75■□□□□ 0.75
HMGN3-203ENST00000620514 PPFIA4O75335 1185 aa19.75■□□□□ 0.75
HMGN3-203ENST00000620514 STAM2O75886 525 aa19.75■□□□□ 0.75
HMGN3-203ENST00000620514 IQCF3P0C7M6 154 aa19.75■□□□□ 0.75
HMGN3-203ENST00000620514 FUT2Q10981 343 aa19.75■□□□□ 0.75
HMGN3-203ENST00000620514 RTN1Q16799 776 aa19.75■□□□□ 0.75
HMGN3-203ENST00000620514 PCNX4Q63HM2 1172 aa19.75■□□□□ 0.75
HMGN3-203ENST00000620514 C7orf31Q8N865 590 aa19.75■□□□□ 0.75
HMGN3-203ENST00000620514 RETREG2Q8NC44 543 aa19.75■□□□□ 0.75
HMGN3-203ENST00000620514 KATNAL1Q9BW62 490 aa19.75■□□□□ 0.75
HMGN3-203ENST00000620514 MTIF3Q9H2K0 278 aaKnown RBP19.75■□□□□ 0.75
HMGN3-203ENST00000620514 RBM28Q9NW13 759 aaKnown RBP19.75■□□□□ 0.75
HMGN3-203ENST00000620514 GTF2IRD1Q9UHL9 959 aa19.75■□□□□ 0.75
HMGN3-203ENST00000620514 TELO2Q9Y4R8 837 aa19.75■□□□□ 0.75
HMGN3-203ENST00000620514 HSPA4P34932 840 aa19.74■□□□□ 0.75
HMGN3-203ENST00000620514 ZNF200P98182 395 aaPredicted RBP19.74■□□□□ 0.75
HMGN3-203ENST00000620514 BFSP2Q13515 415 aa19.74■□□□□ 0.75
HMGN3-203ENST00000620514 HIC1Q14526 733 aa19.74■□□□□ 0.75
HMGN3-203ENST00000620514 GRIN2CQ14957 1233 aa19.74■□□□□ 0.75
HMGN3-203ENST00000620514 WWC2Q6AWC2 1192 aa19.74■□□□□ 0.75
HMGN3-203ENST00000620514 CYFIP1Q7L576 1253 aa19.74■□□□□ 0.75
HMGN3-203ENST00000620514 C16orf70Q9BSU1 422 aa19.74■□□□□ 0.75
HMGN3-203ENST00000620514 FAM217BQ9NTX9 383 aaPredicted RBP19.74■□□□□ 0.75
HMGN3-203ENST00000620514 SNX14Q9Y5W7 946 aa19.74■□□□□ 0.75
HMGN3-203ENST00000620514 TANC1Q9C0D5 1861 aa19.73■□□□□ 0.75
HMGN3-203ENST00000620514 GOLGA8AA7E2F4 631 aa19.73■□□□□ 0.75
HMGN3-203ENST00000620514 GOLGA8BA8MQT2 603 aa19.73■□□□□ 0.75
HMGN3-203ENST00000620514 ZBBXA8MT70 800 aa19.73■□□□□ 0.75
HMGN3-203ENST00000620514 FIBPO43427 364 aa19.73■□□□□ 0.75
HMGN3-203ENST00000620514 CDC27P30260 824 aa19.73■□□□□ 0.75
HMGN3-203ENST00000620514 TYW1BQ6NUM6 668 aa19.73■□□□□ 0.75
HMGN3-203ENST00000620514 JAKMIP1Q96N16 626 aaKnown RBP19.73■□□□□ 0.75
HMGN3-203ENST00000620514 ZNF576Q9H609 170 aa19.73■□□□□ 0.75
HMGN3-203ENST00000620514 DOCK5Q9H7D0 1870 aa19.73■□□□□ 0.75
HMGN3-203ENST00000620514 TRIP12Q14669 1992 aaPredicted RBP19.72■□□□□ 0.75
HMGN3-203ENST00000620514 PFKMP08237 780 aa19.72■□□□□ 0.75
HMGN3-203ENST00000620514 HMGB1P09429 215 aaKnown RBP19.72■□□□□ 0.75
HMGN3-203ENST00000620514 RFC2P35250 354 aa19.72■□□□□ 0.75
HMGN3-203ENST00000620514 RABGGTBP53611 331 aa19.72■□□□□ 0.75
HMGN3-203ENST00000620514 APOBRQ0VD83 1088 aa19.72■□□□□ 0.75
HMGN3-203ENST00000620514 NEDD9Q14511 834 aa19.72■□□□□ 0.75
HMGN3-203ENST00000620514 XRRA1Q6P2D8 792 aa19.72■□□□□ 0.75
HMGN3-203ENST00000620514 METTL7BQ6UX53 244 aa19.72■□□□□ 0.75
HMGN3-203ENST00000620514 Q6ZUG5 572 aa19.72■□□□□ 0.75
HMGN3-203ENST00000620514 CAGE1Q8TC20 777 aa19.72■□□□□ 0.75
HMGN3-203ENST00000620514 WNT8BQ93098 351 aa19.72■□□□□ 0.75
HMGN3-203ENST00000620514 NAP1L2Q9ULW6 460 aaPredicted RBP19.72■□□□□ 0.75
HMGN3-203ENST00000620514 PCDHA6Q9UN73 950 aa19.72■□□□□ 0.75
HMGN3-203ENST00000620514 YBX2Q9Y2T7 364 aaKnown RBP19.72■□□□□ 0.75
HMGN3-203ENST00000620514 PCDHA8Q9Y5H6 950 aa19.72■□□□□ 0.75
HMGN3-203ENST00000620514 SLC4A7Q9Y6M7 1214 aa19.72■□□□□ 0.75
HMGN3-203ENST00000620514 V9GY48 417 aaPredicted RBP19.72■□□□□ 0.75
HMGN3-203ENST00000620514 LGALS2P05162 132 aa19.71■□□□□ 0.75
HMGN3-203ENST00000620514 NEFLP07196 543 aa19.71■□□□□ 0.75
HMGN3-203ENST00000620514 FGD1P98174 961 aa19.71■□□□□ 0.75
HMGN3-203ENST00000620514 SP4Q02446 784 aa19.71■□□□□ 0.75
HMGN3-203ENST00000620514 GPNMBQ14956 572 aa19.71■□□□□ 0.75
HMGN3-203ENST00000620514 NLRX1Q86UT6 975 aa19.71■□□□□ 0.75
HMGN3-203ENST00000620514 CCDC155Q8N6L0 562 aa19.71■□□□□ 0.75
HMGN3-203ENST00000620514 AFAP1L1Q8TED9 768 aa19.71■□□□□ 0.75
HMGN3-203ENST00000620514 GPR20Q99678 358 aa19.71■□□□□ 0.75
HMGN3-203ENST00000620514 FTOQ9C0B1 505 aaKnown RBP eCLIP19.71■□□□□ 0.75
HMGN3-203ENST00000620514 NKX2-4Q9H2Z4 354 aa19.71■□□□□ 0.75
HMGN3-203ENST00000620514 SPDYE3A6NKU9 549 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms