RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 COL5A2P05997 1499 aaPredicted RBP10.71□□□□□ -0.69
TNFAIP3-210ENST00000620204 CHN1P15882 459 aa10.71□□□□□ -0.69
TNFAIP3-210ENST00000620204 PDE6AP16499 860 aa10.71□□□□□ -0.69
TNFAIP3-210ENST00000620204 C6orf89Q6UWU4 347 aa10.71□□□□□ -0.69
TNFAIP3-210ENST00000620204 DTHD1Q6ZMT9 781 aa10.71□□□□□ -0.69
TNFAIP3-210ENST00000620204 RETREG2Q8NC44 543 aa10.71□□□□□ -0.69
TNFAIP3-210ENST00000620204 UTYO14607 1347 aa10.71□□□□□ -0.7
TNFAIP3-210ENST00000620204 CCDC194A0A1B0GVG4 234 aa10.71□□□□□ -0.7
TNFAIP3-210ENST00000620204 BMP15O95972 392 aa10.71□□□□□ -0.7
TNFAIP3-210ENST00000620204 SRGNP10124 158 aa10.71□□□□□ -0.7
TNFAIP3-210ENST00000620204 MCAMP43121 646 aa10.71□□□□□ -0.7
TNFAIP3-210ENST00000620204 ZNF844Q08AG5 666 aa10.71□□□□□ -0.7
TNFAIP3-210ENST00000620204 IFIT1BQ5T764 474 aaKnown RBP10.71□□□□□ -0.7
TNFAIP3-210ENST00000620204 ANKRD40Q6AI12 368 aa10.71□□□□□ -0.7
TNFAIP3-210ENST00000620204 FAM47EQ6ZV65 393 aa10.71□□□□□ -0.7
TNFAIP3-210ENST00000620204 LRRC34Q8IZ02 419 aa10.71□□□□□ -0.7
TNFAIP3-210ENST00000620204 UIMC1Q96RL1 719 aa10.71□□□□□ -0.7
TNFAIP3-210ENST00000620204 PSMD1Q99460 953 aa10.71□□□□□ -0.7
TNFAIP3-210ENST00000620204 A0A1W2PQC6 194 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 ERVV-2B6SEH9 535 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 EPHB6O15197 1021 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 RGS16O15492 202 aaPredicted RBP10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 FCER1AP12319 257 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 LLGL1Q15334 1064 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 GIGYF2Q6Y7W6 1299 aaKnown RBP10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 ERICH1Q86X53 443 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 ADSSL1Q8N142 457 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 LPIN2Q92539 896 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 XPO6Q96QU8 1125 aaKnown RBP10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 PRMT1Q99873 361 aaKnown RBP10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 CELF4Q9BZC1 486 aaKnown RBP10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 ECT2Q9H8V3 914 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 PIH1D3Q9NQM4 214 aaKnown RBP10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 UBOX5O94941 541 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 GRIK3Q13003 919 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 ELOA2Q8IYF1 753 aaPredicted RBP10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 MARCH10Q8NA82 808 aaPredicted RBP10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 MTRQ99707 1265 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 PAPOLBQ9NRJ5 636 aaKnown RBP10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 ABCF3Q9NUQ8 709 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 SEPT11Q9NVA2 429 aaKnown RBP10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 NBPF26B4DH59 902 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 SART1O43290 800 aaKnown RBP10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 KRT13P13646 458 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 FLT3P36888 993 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 POLR2FP61218 127 aaKnown RBP10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 ERVK-9P63128 1117 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 XRCC4Q13426 336 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 SLC9C1Q4G0N8 1177 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 KLHDC7AQ5VTJ3 777 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 NBPF10Q6P3W6 841 aaKnown RBP10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 TRPM8Q7Z2W7 1104 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 NBPF15Q8N660 670 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 C3orf20Q8ND61 904 aa10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 NSRP1Q9H0G5 558 aaKnown RBP10.7□□□□□ -0.7
TNFAIP3-210ENST00000620204 MARCH6O60337 910 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 KLRC1P26715 233 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 PLTPP55058 493 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 NBPF20Q3BBV1 942 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 LMNTD2Q8IXW0 634 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 FBF1Q8TES7 1133 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 SDR42E1Q8WUS8 393 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 PIK3R5Q8WYR1 880 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 TATDN2Q93075 761 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 P2RX5Q93086 422 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 DDX23Q9BUQ8 820 aaKnown RBP10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 CNNM2Q9H8M5 875 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 RFX7Q2KHR2 1363 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 TNKSO95271 1327 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 BICDL2A1A5D9 508 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 NKRFO15226 690 aaKnown RBP eCLIP10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 MGRN1O60291 552 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 FECHP22830 423 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 ADD2P35612 726 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 IGHMBP2P38935 993 aaKnown RBP10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 LIFRP42702 1097 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 ALDH5A1P51649 535 aaPredicted RBP10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 FOXO4P98177 505 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 LRRC41Q15345 812 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 CCDC6Q16204 474 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 RABL6Q3YEC7 729 aaPredicted RBP10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 CCT6BQ92526 530 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 CDK5RAP3Q96JB5 506 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 TRIM4Q9C037 500 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 TRIM33Q9UPN9 1127 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 RGPD1P0DJD0 1748 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 HSPA1LP34931 641 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 PHKA1P46020 1223 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 MKRN4PQ13434 485 aaPredicted RBP10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 BIRC3Q13489 604 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 NUGGCQ68CJ6 796 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 TLDC1Q6P9B6 456 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 SH3RF1Q7Z6J0 888 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 SYNE4Q8N205 404 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 GDAP1Q8TB36 358 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 GPKOWQ92917 476 aaPredicted RBP eCLIP10.69□□□□□ -0.72e-6■■■■■ 37.1
TNFAIP3-210ENST00000620204 NDST4Q9H3R1 872 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 THAP9Q9H5L6 903 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 TBC1D7Q9P0N9 293 aa10.69□□□□□ -0.7
TNFAIP3-210ENST00000620204 ZBTB1Q9Y2K1 713 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms