RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 FNBP4Q8N3X1 1017 aaPredicted RBP13.07□□□□□ -0.32
C11orf54-215ENST00000617482 GOLGA6L1Q8N7Z2 621 aa13.07□□□□□ -0.32
C11orf54-215ENST00000617482 SPATA4Q8NEY3 305 aa13.07□□□□□ -0.32
C11orf54-215ENST00000617482 IQCDQ96DY2 449 aa13.07□□□□□ -0.32
C11orf54-215ENST00000617482 OSBPL9Q96SU4 736 aa13.07□□□□□ -0.32
C11orf54-215ENST00000617482 TSG101Q99816 390 aa13.07□□□□□ -0.32
C11orf54-215ENST00000617482 DMGDHQ9UI17 866 aaKnown RBP13.07□□□□□ -0.32
C11orf54-215ENST00000617482 DAGLAQ9Y4D2 1042 aa13.07□□□□□ -0.32
C11orf54-215ENST00000617482 ZC3H4Q9UPT8 1303 aaKnown RBP13.06□□□□□ -0.32
C11orf54-215ENST00000617482 LTBP4Q8N2S1 1624 aa13.06□□□□□ -0.32
C11orf54-215ENST00000617482 NAV1Q8NEY1 1877 aa13.06□□□□□ -0.32
C11orf54-215ENST00000617482 APBA1Q02410 837 aa13.06□□□□□ -0.32
C11orf54-215ENST00000617482 KCNMA1Q12791 1236 aa13.06□□□□□ -0.32
C11orf54-215ENST00000617482 ASPRV1Q53RT3 343 aa13.06□□□□□ -0.32
C11orf54-215ENST00000617482 TDRD12Q587J7 1177 aaKnown RBP13.06□□□□□ -0.32
C11orf54-215ENST00000617482 CCDC70Q6NSX1 233 aa13.06□□□□□ -0.32
C11orf54-215ENST00000617482 SLF2Q8IX21 1173 aa13.06□□□□□ -0.32
C11orf54-215ENST00000617482 NELFCDQ8IXH7 590 aa13.06□□□□□ -0.32
C11orf54-215ENST00000617482 HAS1Q92839 578 aa13.06□□□□□ -0.32
C11orf54-215ENST00000617482 FAM163AQ96GL9 167 aaPredicted RBP13.06□□□□□ -0.32
C11orf54-215ENST00000617482 SBF2Q86WG5 1849 aa13.06□□□□□ -0.32
C11orf54-215ENST00000617482 DDX60LQ5H9U9 1706 aaKnown RBP13.06□□□□□ -0.32
C11orf54-215ENST00000617482 RIMBP2O15034 1052 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 PRPF6O94906 941 aaKnown RBP13.05□□□□□ -0.32
C11orf54-215ENST00000617482 LCA5LO95447 670 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 SLURP2P0DP57 97 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 SLC1A4P43007 532 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 CACNB1Q02641 598 aaPredicted RBP13.05□□□□□ -0.32
C11orf54-215ENST00000617482 EHHADHQ08426 723 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 COASYQ13057 564 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 VPS72Q15906 364 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 SKIDA1Q1XH10 827 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 TMEM119Q4V9L6 283 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 CCDC181Q5TID7 509 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 TMC4Q7Z404 712 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 AFAP1L1Q8TED9 768 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 DNAJC19Q96DA6 116 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 ALS2CR12Q96Q35 445 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 FGFBP2Q9BYJ0 223 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 PLEKHA4Q9H4M7 779 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 RIC8AQ9NPQ8 531 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 PANK4Q9NVE7 773 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 PCDHA12Q9UN75 941 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 EP400Q96L91 3159 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 PNMA6FA0A0J9YX94 578 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 NPHP3-ACAD11A0A0J9YXS1 232 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 hCG_1984214I3L0E3 225 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 AGPSO00116 658 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 RAD21O60216 631 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 DNA2P51530 1060 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 ENOX2Q16206 610 aaKnown RBP13.05□□□□□ -0.32
C11orf54-215ENST00000617482 CCDC40Q4G0X9 1142 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 PDXDC1Q6P996 788 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 KCTD1Q719H9 257 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 ZNF713Q8N859 430 aaPredicted RBP13.05□□□□□ -0.32
C11orf54-215ENST00000617482 TBC1D16Q8TBP0 767 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 MTMR8Q96EF0 704 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 TRIM34Q9BYJ4 488 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 DDX4Q9NQI0 724 aaKnown RBP13.05□□□□□ -0.32
C11orf54-215ENST00000617482 MYH1P12882 1939 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 GAKO14976 1311 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 COL24A1Q17RW2 1714 aa13.05□□□□□ -0.32
C11orf54-215ENST00000617482 USP17L10C9JJH3 530 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 E9PMD0 336 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 TRIM66O15016 1216 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 FKBP3Q00688 224 aaKnown RBP13.04□□□□□ -0.32
C11orf54-215ENST00000617482 ARID5AQ03989 594 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 ZNF543Q08ER8 600 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 PSMD2Q13200 908 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 HGSNATQ68CP4 663 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 PPP4R3AQ6IN85 833 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 LRRC31Q6UY01 552 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 SND1Q7KZF4 910 aaKnown RBP eCLIP13.04□□□□□ -0.32
C11orf54-215ENST00000617482 MMGT1Q8N4V1 131 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 MS4A14Q96JA4 679 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 FAM184BQ9ULE4 1060 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 COL4A3BPQ9Y5P4 624 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 MPHOSPH10O00566 681 aaKnown RBP13.04□□□□□ -0.32
C11orf54-215ENST00000617482 TTLL1O95922 423 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 SNHG28P0DPA3 235 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 PRLRP16471 622 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 TCP1P17987 556 aaKnown RBP13.04□□□□□ -0.32
C11orf54-215ENST00000617482 POLR2FP61218 127 aaKnown RBP13.04□□□□□ -0.32
C11orf54-215ENST00000617482 GABPAQ06546 454 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 ASTE1Q2TB18 679 aaPredicted RBP13.04□□□□□ -0.32
C11orf54-215ENST00000617482 FAM26FQ5R3K3 315 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 C10orf67Q8IYJ2 551 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 CUL5Q93034 780 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 RBM17Q96I25 401 aaKnown RBP13.04□□□□□ -0.32
C11orf54-215ENST00000617482 LRRC27Q9C0I9 530 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 PSTPIP2Q9H939 334 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 FEZ2Q9UHY8 353 aaPredicted RBP13.04□□□□□ -0.32
C11orf54-215ENST00000617482 KIAA1024Q9UPX6 916 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 HYOU1Q9Y4L1 999 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 ABCB11O95342 1321 aa13.04□□□□□ -0.32
C11orf54-215ENST00000617482 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.03□□□□□ -0.32
C11orf54-215ENST00000617482 GOLGA6BA6NDN3 693 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 MYO1CO00159 1063 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 NOL4O94818 638 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 IVLP07476 585 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms