RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 PCDHA8Q9Y5H6 950 aa25.44■■□□□ 1.66
CBWD3-212ENST00000616550 STXBP3O00186 592 aa25.43■■□□□ 1.66
CBWD3-212ENST00000616550 SUPT20HL2P0C7V6 817 aa25.43■■□□□ 1.66
CBWD3-212ENST00000616550 UBA1P22314 1058 aaKnown RBP25.43■■□□□ 1.66
CBWD3-212ENST00000616550 ADCY7P51828 1080 aa25.43■■□□□ 1.66
CBWD3-212ENST00000616550 CHMP4BP1P59074 171 aa25.43■■□□□ 1.66
CBWD3-212ENST00000616550 AKAP17AQ02040 695 aaKnown RBP25.43■■□□□ 1.66
CBWD3-212ENST00000616550 SP2Q02086 613 aa25.43■■□□□ 1.66
CBWD3-212ENST00000616550 NLRX1Q86UT6 975 aa25.43■■□□□ 1.66
CBWD3-212ENST00000616550 SPATA33Q96N06 139 aa25.43■■□□□ 1.66
CBWD3-212ENST00000616550 PPP1R12CQ9BZL4 782 aa25.43■■□□□ 1.66
CBWD3-212ENST00000616550 GLT8D2Q9H1C3 349 aa25.43■■□□□ 1.66
CBWD3-212ENST00000616550 PDRG1Q9NUG6 133 aa25.43■■□□□ 1.66
CBWD3-212ENST00000616550 SMCO2A6NFE2 343 aa25.42■■□□□ 1.66
CBWD3-212ENST00000616550 SPATA31C2B4DYI2 1134 aa25.42■■□□□ 1.66
CBWD3-212ENST00000616550 PRPF3O43395 683 aaKnown RBP25.42■■□□□ 1.66
CBWD3-212ENST00000616550 FIBPO43427 364 aa25.42■■□□□ 1.66
CBWD3-212ENST00000616550 SORBS3O60504 671 aa25.42■■□□□ 1.66
CBWD3-212ENST00000616550 CCT2P78371 535 aaKnown RBP25.42■■□□□ 1.66
CBWD3-212ENST00000616550 PFKFB3Q16875 520 aaPredicted RBP25.42■■□□□ 1.66
CBWD3-212ENST00000616550 MFSD5Q6N075 450 aa25.42■■□□□ 1.66
CBWD3-212ENST00000616550 TYW1BQ6NUM6 668 aa25.42■■□□□ 1.66
CBWD3-212ENST00000616550 TMEM199Q8N511 208 aa25.42■■□□□ 1.66
CBWD3-212ENST00000616550 PPFIA4O75335 1185 aa25.41■■□□□ 1.66
CBWD3-212ENST00000616550 SCG2P13521 617 aa25.41■■□□□ 1.66
CBWD3-212ENST00000616550 PTPN11Q06124 597 aaPredicted RBP25.41■■□□□ 1.66
CBWD3-212ENST00000616550 NEDD9Q14511 834 aa25.41■■□□□ 1.66
CBWD3-212ENST00000616550 SHHQ15465 462 aa25.41■■□□□ 1.66
CBWD3-212ENST00000616550 HIPK3Q9H422 1215 aa25.41■■□□□ 1.66
CBWD3-212ENST00000616550 TRMT13Q9NUP7 481 aaKnown RBP25.41■■□□□ 1.66
CBWD3-212ENST00000616550 SOX1O00570 391 aaPredicted RBP25.4■■□□□ 1.66
CBWD3-212ENST00000616550 FOSP01100 380 aaPredicted RBP25.4■■□□□ 1.66
CBWD3-212ENST00000616550 ANAPC15P60006 121 aa25.4■■□□□ 1.66
CBWD3-212ENST00000616550 ZNF274Q96GC6 653 aaPredicted RBP25.4■■□□□ 1.66
CBWD3-212ENST00000616550 KATNAL1Q9BW62 490 aa25.4■■□□□ 1.66
CBWD3-212ENST00000616550 PPIGQ13427 754 aaKnown RBP eCLIP25.39■■□□□ 1.66
CBWD3-212ENST00000616550 HSDL1Q3SXM5 330 aa25.39■■□□□ 1.66
CBWD3-212ENST00000616550 C9orf50Q5SZB4 431 aa25.39■■□□□ 1.66
CBWD3-212ENST00000616550 CCDC12Q8WUD4 166 aaPredicted RBP25.39■■□□□ 1.66
CBWD3-212ENST00000616550 PPP1R13LQ8WUF5 828 aa25.39■■□□□ 1.66
CBWD3-212ENST00000616550 KAT2BQ92831 832 aa25.39■■□□□ 1.66
CBWD3-212ENST00000616550 PHKBQ93100 1093 aa25.39■■□□□ 1.66
CBWD3-212ENST00000616550 CDHR1Q96JP9 859 aa25.39■■□□□ 1.66
CBWD3-212ENST00000616550 LARP6Q9BRS8 491 aaKnown RBP25.39■■□□□ 1.66
CBWD3-212ENST00000616550 NCOA5Q9HCD5 579 aaKnown RBP25.39■■□□□ 1.66
CBWD3-212ENST00000616550 NOP56O00567 594 aaKnown RBP25.38■■□□□ 1.65
CBWD3-212ENST00000616550 IFNAR1P17181 557 aa25.38■■□□□ 1.65
CBWD3-212ENST00000616550 CYP2C18P33260 490 aa25.38■■□□□ 1.65
CBWD3-212ENST00000616550 SEMA3FQ13275 785 aa25.38■■□□□ 1.65
CBWD3-212ENST00000616550 NTRK3Q16288 839 aa25.38■■□□□ 1.65
CBWD3-212ENST00000616550 METTL7BQ6UX53 244 aa25.38■■□□□ 1.65
CBWD3-212ENST00000616550 CYFIP1Q7L576 1253 aa25.38■■□□□ 1.65
CBWD3-212ENST00000616550 GIMAP8Q8ND71 665 aaPredicted RBP25.38■■□□□ 1.65
CBWD3-212ENST00000616550 GPRASP2Q96D09 838 aa25.38■■□□□ 1.65
CBWD3-212ENST00000616550 LRCH3Q96II8 777 aa25.38■■□□□ 1.65
CBWD3-212ENST00000616550 SENP7Q9BQF6 1050 aa25.38■■□□□ 1.65
CBWD3-212ENST00000616550 SLC26A6Q9BXS9 759 aa25.38■■□□□ 1.65
CBWD3-212ENST00000616550 RNF26Q9BY78 433 aaPredicted RBP25.38■■□□□ 1.65
CBWD3-212ENST00000616550 ZNF286BP0CG31 522 aa25.37■■□□□ 1.65
CBWD3-212ENST00000616550 HOXD8P13378 290 aaPredicted RBP25.37■■□□□ 1.65
CBWD3-212ENST00000616550 CSF2RAP15509 400 aa25.37■■□□□ 1.65
CBWD3-212ENST00000616550 PSEN2P49810 448 aa25.37■■□□□ 1.65
CBWD3-212ENST00000616550 EPHB4P54760 987 aa25.37■■□□□ 1.65
CBWD3-212ENST00000616550 PKN1Q16512 942 aa25.37■■□□□ 1.65
CBWD3-212ENST00000616550 ALG1Q9BT22 464 aa25.37■■□□□ 1.65
CBWD3-212ENST00000616550 NOC4LQ9BVI4 516 aaKnown RBP25.37■■□□□ 1.65
CBWD3-212ENST00000616550 BCAS3Q9H6U6 928 aa25.37■■□□□ 1.65
CBWD3-212ENST00000616550 NOD1Q9Y239 953 aa25.37■■□□□ 1.65
CBWD3-212ENST00000616550 DOCK5Q9H7D0 1870 aa25.36■■□□□ 1.65
CBWD3-212ENST00000616550 CPLX1O14810 134 aa25.36■■□□□ 1.65
CBWD3-212ENST00000616550 CYP2C9P11712 490 aa25.36■■□□□ 1.65
CBWD3-212ENST00000616550 ITGB5P18084 799 aa25.36■■□□□ 1.65
CBWD3-212ENST00000616550 AP3B2Q13367 1082 aa25.36■■□□□ 1.65
CBWD3-212ENST00000616550 MFSD10Q14728 455 aa25.36■■□□□ 1.65
CBWD3-212ENST00000616550 TRIM22Q8IYM9 498 aa25.36■■□□□ 1.65
CBWD3-212ENST00000616550 C7orf31Q8N865 590 aa25.36■■□□□ 1.65
CBWD3-212ENST00000616550 C6orf50Q9HD87 102 aa25.36■■□□□ 1.65
CBWD3-212ENST00000616550 UBIAD1Q9Y5Z9 338 aa25.36■■□□□ 1.65
CBWD3-212ENST00000616550 ESYT2A0FGR8 921 aa25.35■■□□□ 1.65
CBWD3-212ENST00000616550 MAFGO15525 162 aa25.35■■□□□ 1.65
CBWD3-212ENST00000616550 PPFIA3O75145 1194 aa25.35■■□□□ 1.65
CBWD3-212ENST00000616550 F2P00734 622 aa25.35■■□□□ 1.65
CBWD3-212ENST00000616550 SSRP1Q08945 709 aaKnown RBP25.35■■□□□ 1.65
CBWD3-212ENST00000616550 STK3Q13188 491 aa25.35■■□□□ 1.65
CBWD3-212ENST00000616550 MTMR1Q13613 665 aa25.35■■□□□ 1.65
CBWD3-212ENST00000616550 KIAA0753Q2KHM9 967 aa25.35■■□□□ 1.65
CBWD3-212ENST00000616550 CPLX2Q6PUV4 134 aaKnown RBP25.35■■□□□ 1.65
CBWD3-212ENST00000616550 SESTD1Q86VW0 696 aa25.35■■□□□ 1.65
CBWD3-212ENST00000616550 PGBD1Q96JS3 809 aa25.35■■□□□ 1.65
CBWD3-212ENST00000616550 RNPC3Q96LT9 517 aaKnown RBP25.35■■□□□ 1.65
CBWD3-212ENST00000616550 ANO3Q9BYT9 981 aa25.35■■□□□ 1.65
CBWD3-212ENST00000616550 ZMYND12Q9H0C1 365 aa25.35■■□□□ 1.65
CBWD3-212ENST00000616550 JADE2Q9NQC1 790 aa25.35■■□□□ 1.65
CBWD3-212ENST00000616550 TMEM260Q9NX78 707 aa25.35■■□□□ 1.65
CBWD3-212ENST00000616550 UMODL1Q5DID0 1318 aa25.35■■□□□ 1.65
CBWD3-212ENST00000616550 GNA11P29992 359 aa25.34■■□□□ 1.65
CBWD3-212ENST00000616550 CLK2P49760 499 aaKnown RBP25.34■■□□□ 1.65
CBWD3-212ENST00000616550 CCL23P55773 120 aa25.34■■□□□ 1.65
CBWD3-212ENST00000616550 PTGISQ16647 500 aa25.34■■□□□ 1.65
CBWD3-212ENST00000616550 GPR153Q6NV75 609 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms