RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 ELAC2Q9BQ52 826 aaKnown RBP15.97■□□□□ 0.15
VPS36-207ENST00000611132 ZMYND12Q9H0C1 365 aa15.97■□□□□ 0.15
VPS36-207ENST00000611132 NOP53Q9NZM5 478 aaKnown RBP15.97■□□□□ 0.15
VPS36-207ENST00000611132 CYP27B1O15528 508 aa15.97■□□□□ 0.15
VPS36-207ENST00000611132 ADAMTS2O95450 1211 aa15.97■□□□□ 0.15
VPS36-207ENST00000611132 AFPP02771 609 aaKnown RBP15.97■□□□□ 0.15
VPS36-207ENST00000611132 SRGNP10124 158 aa15.97■□□□□ 0.15
VPS36-207ENST00000611132 TRAPPC11Q7Z392 1133 aa15.97■□□□□ 0.15
VPS36-207ENST00000611132 AGPAT5Q9NUQ2 364 aa15.97■□□□□ 0.15
VPS36-207ENST00000611132 CEP72Q9P209 647 aa15.97■□□□□ 0.15
VPS36-207ENST00000611132 KIAA1024Q9UPX6 916 aa15.97■□□□□ 0.15
VPS36-207ENST00000611132 MMEP08473 750 aa15.97■□□□□ 0.15
VPS36-207ENST00000611132 LSP1P33241 339 aa15.97■□□□□ 0.15
VPS36-207ENST00000611132 SLCO1A2P46721 670 aa15.97■□□□□ 0.15
VPS36-207ENST00000611132 ILDR1Q86SU0 546 aaPredicted RBP15.97■□□□□ 0.15
VPS36-207ENST00000611132 LCMT1Q9UIC8 334 aa15.97■□□□□ 0.15
VPS36-207ENST00000611132 SERPINA10Q9UK55 444 aa15.97■□□□□ 0.15
VPS36-207ENST00000611132 NPHP4O75161 1426 aaPredicted RBP15.97■□□□□ 0.15
VPS36-207ENST00000611132 ZNF18P17022 549 aa15.96■□□□□ 0.15
VPS36-207ENST00000611132 SLMAPQ14BN4 828 aa15.96■□□□□ 0.15
VPS36-207ENST00000611132 KIFC2Q96AC6 838 aa15.96■□□□□ 0.15
VPS36-207ENST00000611132 MAP3K14Q99558 947 aa15.96■□□□□ 0.15
VPS36-207ENST00000611132 TROVE2P10155 538 aaKnown RBP eCLIP15.96■□□□□ 0.15
VPS36-207ENST00000611132 VPS41P49754 854 aa15.96■□□□□ 0.15
VPS36-207ENST00000611132 DDB1Q16531 1140 aa15.96■□□□□ 0.15
VPS36-207ENST00000611132 UNC13DQ70J99 1090 aa15.96■□□□□ 0.15
VPS36-207ENST00000611132 RDH13Q8NBN7 331 aa15.96■□□□□ 0.15
VPS36-207ENST00000611132 YY1AP1Q9H869 796 aa15.96■□□□□ 0.15
VPS36-207ENST00000611132 SENP2Q9HC62 589 aa15.96■□□□□ 0.15
VPS36-207ENST00000611132 SEC31BQ9NQW1 1179 aa15.96■□□□□ 0.15
VPS36-207ENST00000611132 PIK3C2BO00750 1634 aa15.96■□□□□ 0.15
VPS36-207ENST00000611132 PPP1R3GB7ZBB8 358 aa15.96■□□□□ 0.15
VPS36-207ENST00000611132 MAP2K7O14733 419 aa15.96■□□□□ 0.15
VPS36-207ENST00000611132 RASGRF2O14827 1237 aa15.96■□□□□ 0.15
VPS36-207ENST00000611132 TRIM37O94972 964 aa15.96■□□□□ 0.15
VPS36-207ENST00000611132 RFC4P35249 363 aa15.96■□□□□ 0.15
VPS36-207ENST00000611132 MMGT1Q8N4V1 131 aa15.96■□□□□ 0.15
VPS36-207ENST00000611132 SH3GLB2Q9NR46 395 aa15.96■□□□□ 0.15
VPS36-207ENST00000611132 PPLO60437 1756 aa15.96■□□□□ 0.15
VPS36-207ENST00000611132 KRT14P02533 472 aa15.96■□□□□ 0.14
VPS36-207ENST00000611132 ADCY8P40145 1251 aa15.96■□□□□ 0.14
VPS36-207ENST00000611132 RPS8P62241 208 aaKnown RBP15.96■□□□□ 0.14
VPS36-207ENST00000611132 C6orf118Q5T5N4 469 aa15.96■□□□□ 0.14
VPS36-207ENST00000611132 TYW1Q9NV66 732 aaKnown RBP15.96■□□□□ 0.14
VPS36-207ENST00000611132 ARHGEF35A5YM69 484 aa15.95■□□□□ 0.14
VPS36-207ENST00000611132 CYP2J2P51589 502 aa15.95■□□□□ 0.14
VPS36-207ENST00000611132 DR1Q01658 176 aa15.95■□□□□ 0.14
VPS36-207ENST00000611132 TBX2Q13207 712 aaPredicted RBP15.95■□□□□ 0.14
VPS36-207ENST00000611132 ZNF622Q969S3 477 aaKnown RBP eCLIP15.95■□□□□ 0.145e-6■■■□□ 17.1
VPS36-207ENST00000611132 POLD4Q9HCU8 107 aa15.95■□□□□ 0.14
VPS36-207ENST00000611132 ARHGEF28Q8N1W1 1705 aaKnown RBP15.95■□□□□ 0.14
VPS36-207ENST00000611132 KIF20BQ96Q89 1820 aa15.95■□□□□ 0.14
VPS36-207ENST00000611132 HSPA6P17066 643 aa15.95■□□□□ 0.14
VPS36-207ENST00000611132 GJA10Q969M2 543 aa15.95■□□□□ 0.14
VPS36-207ENST00000611132 IMPG2Q9BZV3 1241 aa15.95■□□□□ 0.14
VPS36-207ENST00000611132 GBP7Q8N8V2 638 aaPredicted RBP15.95■□□□□ 0.14
VPS36-207ENST00000611132 SYNCQ9H7C4 482 aa15.95■□□□□ 0.14
VPS36-207ENST00000611132 PSTPIP2Q9H939 334 aa15.95■□□□□ 0.14
VPS36-207ENST00000611132 GEMIN8Q9NWZ8 242 aaKnown RBP15.95■□□□□ 0.14
VPS36-207ENST00000611132 ASAP1Q9ULH1 1129 aa15.95■□□□□ 0.14
VPS36-207ENST00000611132 CDHR2Q9BYE9 1310 aa15.95■□□□□ 0.14
VPS36-207ENST00000611132 PP2D1A8MPX8 630 aa15.95■□□□□ 0.14
VPS36-207ENST00000611132 ADCY2Q08462 1091 aa15.95■□□□□ 0.14
VPS36-207ENST00000611132 FAM83BQ5T0W9 1011 aa15.95■□□□□ 0.14
VPS36-207ENST00000611132 GBP5Q96PP8 586 aa15.95■□□□□ 0.14
VPS36-207ENST00000611132 VPS37BQ9H9H4 285 aa15.95■□□□□ 0.14
VPS36-207ENST00000611132 FGGP02679 453 aa15.94■□□□□ 0.14
VPS36-207ENST00000611132 SEPT2Q15019 361 aa15.94■□□□□ 0.14
VPS36-207ENST00000611132 TAF11Q15544 211 aa15.94■□□□□ 0.14
VPS36-207ENST00000611132 LIN9Q5TKA1 542 aa15.94■□□□□ 0.14
VPS36-207ENST00000611132 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.94■□□□□ 0.14
VPS36-207ENST00000611132 GRK7Q8WTQ7 553 aa15.94■□□□□ 0.14
VPS36-207ENST00000611132 ZIM3Q96PE6 472 aa15.94■□□□□ 0.14
VPS36-207ENST00000611132 IL9RQ01113 521 aa15.94■□□□□ 0.14
VPS36-207ENST00000611132 BRIP1Q9BX63 1249 aa15.94■□□□□ 0.14
VPS36-207ENST00000611132 SH2D4AQ9H788 454 aa15.94■□□□□ 0.14
VPS36-207ENST00000611132 EMILIN3Q9NT22 766 aa15.94■□□□□ 0.14
VPS36-207ENST00000611132 PTPN22Q9Y2R2 807 aa15.94■□□□□ 0.14
VPS36-207ENST00000611132 AXIN2Q9Y2T1 843 aa15.94■□□□□ 0.14
VPS36-207ENST00000611132 FRMPD2Q68DX3 1309 aaPredicted RBP15.94■□□□□ 0.14
VPS36-207ENST00000611132 SMIM24O75264 130 aa15.94■□□□□ 0.14
VPS36-207ENST00000611132 SLC1A4P43007 532 aa15.94■□□□□ 0.14
VPS36-207ENST00000611132 DDX47Q9H0S4 455 aaKnown RBP15.94■□□□□ 0.14
VPS36-207ENST00000611132 PDE6CP51160 858 aa15.93■□□□□ 0.14
VPS36-207ENST00000611132 ANKRD40Q6AI12 368 aa15.93■□□□□ 0.14
VPS36-207ENST00000611132 FOXP4Q8IVH2 680 aaPredicted RBP15.93■□□□□ 0.14
VPS36-207ENST00000611132 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.93■□□□□ 0.14
VPS36-207ENST00000611132 PHF20Q9BVI0 1012 aa15.93■□□□□ 0.14
VPS36-207ENST00000611132 EDEM3Q9BZQ6 932 aa15.93■□□□□ 0.14
VPS36-207ENST00000611132 TFR2Q9UP52 801 aa15.93■□□□□ 0.14
VPS36-207ENST00000611132 ZBTB1Q9Y2K1 713 aa15.93■□□□□ 0.14
VPS36-207ENST00000611132 PVALEFA0A1B0GWK0 134 aa15.93■□□□□ 0.14
VPS36-207ENST00000611132 ELF1P32519 619 aa15.93■□□□□ 0.14
VPS36-207ENST00000611132 SESN3P58005 492 aa15.93■□□□□ 0.14
VPS36-207ENST00000611132 MESDQ14696 234 aa15.93■□□□□ 0.14
VPS36-207ENST00000611132 PDIA6Q15084 440 aa15.93■□□□□ 0.14
VPS36-207ENST00000611132 SPATA24Q86W54 205 aa15.93■□□□□ 0.14
VPS36-207ENST00000611132 PROM2Q8N271 834 aa15.93■□□□□ 0.14
VPS36-207ENST00000611132 CHMP6Q96FZ7 201 aa15.93■□□□□ 0.14
VPS36-207ENST00000611132 MYO1FO00160 1098 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms