RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 PDIA3P30101 505 aaKnown RBP22.15■■□□□ 1.14
TCF3-219ENST00000610756 EPHB4P54760 987 aa22.15■■□□□ 1.14
TCF3-219ENST00000610756 NAPAP54920 295 aa22.15■■□□□ 1.14
TCF3-219ENST00000610756 C9orf50Q5SZB4 431 aa22.15■■□□□ 1.14
TCF3-219ENST00000610756 TYW1BQ6NUM6 668 aa22.15■■□□□ 1.14
TCF3-219ENST00000610756 TMEM199Q8N511 208 aa22.15■■□□□ 1.14
TCF3-219ENST00000610756 KAT2BQ92831 832 aa22.15■■□□□ 1.14
TCF3-219ENST00000610756 SPATA33Q96N06 139 aa22.15■■□□□ 1.14
TCF3-219ENST00000610756 PCDHA6Q9UN73 950 aa22.15■■□□□ 1.14
TCF3-219ENST00000610756 PCDHA8Q9Y5H6 950 aa22.15■■□□□ 1.14
TCF3-219ENST00000610756 LAMA2P24043 3122 aaKnown RBP22.14■■□□□ 1.14
TCF3-219ENST00000610756 STXBP3O00186 592 aa22.14■■□□□ 1.14
TCF3-219ENST00000610756 FIBPO43427 364 aa22.14■■□□□ 1.14
TCF3-219ENST00000610756 TOB2Q14106 344 aaPredicted RBP22.14■■□□□ 1.14
TCF3-219ENST00000610756 NEDD9Q14511 834 aa22.14■■□□□ 1.14
TCF3-219ENST00000610756 UBE2SQ16763 222 aa22.14■■□□□ 1.14
TCF3-219ENST00000610756 PFKFB3Q16875 520 aaPredicted RBP22.14■■□□□ 1.14
TCF3-219ENST00000610756 HSDL1Q3SXM5 330 aa22.14■■□□□ 1.14
TCF3-219ENST00000610756 SENP7Q9BQF6 1050 aa22.14■■□□□ 1.14
TCF3-219ENST00000610756 PPP1R12CQ9BZL4 782 aa22.14■■□□□ 1.14
TCF3-219ENST00000610756 GLT8D2Q9H1C3 349 aa22.14■■□□□ 1.14
TCF3-219ENST00000610756 HIPK3Q9H422 1215 aa22.14■■□□□ 1.14
TCF3-219ENST00000610756 MLXIPQ9HAP2 919 aa22.14■■□□□ 1.14
TCF3-219ENST00000610756 TRMT13Q9NUP7 481 aaKnown RBP22.14■■□□□ 1.14
TCF3-219ENST00000610756 LTBP2Q14767 1821 aa22.14■■□□□ 1.13
TCF3-219ENST00000610756 KIAA1217Q5T5P2 1943 aa22.14■■□□□ 1.13
TCF3-219ENST00000610756 SMCO2A6NFE2 343 aa22.13■■□□□ 1.13
TCF3-219ENST00000610756 PRPF3O43395 683 aaKnown RBP22.13■■□□□ 1.13
TCF3-219ENST00000610756 EIF5BO60841 1220 aaKnown RBP22.13■■□□□ 1.13
TCF3-219ENST00000610756 SEMA3FQ13275 785 aa22.13■■□□□ 1.13
TCF3-219ENST00000610756 PPIGQ13427 754 aaKnown RBP eCLIP22.13■■□□□ 1.136e-7■□□□□ 11.1
TCF3-219ENST00000610756 NTRK3Q16288 839 aa22.13■■□□□ 1.13
TCF3-219ENST00000610756 NLRX1Q86UT6 975 aa22.13■■□□□ 1.13
TCF3-219ENST00000610756 SESTD1Q86VW0 696 aa22.13■■□□□ 1.13
TCF3-219ENST00000610756 NOC4LQ9BVI4 516 aaKnown RBP22.13■■□□□ 1.13
TCF3-219ENST00000610756 FOSP01100 380 aaPredicted RBP22.12■■□□□ 1.13
TCF3-219ENST00000610756 CSF2RAP15509 400 aa22.12■■□□□ 1.13
TCF3-219ENST00000610756 CYP2C18P33260 490 aa22.12■■□□□ 1.13
TCF3-219ENST00000610756 FAM47CQ5HY64 1035 aa22.12■■□□□ 1.13
TCF3-219ENST00000610756 C16orf59Q7L2K0 433 aa22.12■■□□□ 1.13
TCF3-219ENST00000610756 ZNF274Q96GC6 653 aaPredicted RBP22.12■■□□□ 1.13
TCF3-219ENST00000610756 KATNAL1Q9BW62 490 aa22.12■■□□□ 1.13
TCF3-219ENST00000610756 BCAS3Q9H6U6 928 aa22.12■■□□□ 1.13
TCF3-219ENST00000610756 HAS3O00219 553 aa22.11■■□□□ 1.13
TCF3-219ENST00000610756 MAFGO15525 162 aa22.11■■□□□ 1.13
TCF3-219ENST00000610756 F2P00734 622 aa22.11■■□□□ 1.13
TCF3-219ENST00000610756 SCG2P13521 617 aa22.11■■□□□ 1.13
TCF3-219ENST00000610756 IFNAR1P17181 557 aa22.11■■□□□ 1.13
TCF3-219ENST00000610756 ANAPC15P60006 121 aa22.11■■□□□ 1.13
TCF3-219ENST00000610756 METTL7BQ6UX53 244 aa22.11■■□□□ 1.13
TCF3-219ENST00000610756 GIMAP8Q8ND71 665 aaPredicted RBP22.11■■□□□ 1.13
TCF3-219ENST00000610756 GPRASP2Q96D09 838 aa22.11■■□□□ 1.13
TCF3-219ENST00000610756 CDHR1Q96JP9 859 aa22.11■■□□□ 1.13
TCF3-219ENST00000610756 UPF3BQ9BZI7 483 aaKnown RBP22.11■■□□□ 1.13
TCF3-219ENST00000610756 EHMT1Q9H9B1 1298 aa22.11■■□□□ 1.13
TCF3-219ENST00000610756 UBIAD1Q9Y5Z9 338 aa22.11■■□□□ 1.13
TCF3-219ENST00000610756 CYP2C9P11712 490 aa22.1■■□□□ 1.13
TCF3-219ENST00000610756 ITGB5P18084 799 aa22.1■■□□□ 1.13
TCF3-219ENST00000610756 ADCY7P51828 1080 aa22.1■■□□□ 1.13
TCF3-219ENST00000610756 PKN1Q16512 942 aa22.1■■□□□ 1.13
TCF3-219ENST00000610756 CYFIP1Q7L576 1253 aa22.1■■□□□ 1.13
TCF3-219ENST00000610756 PDRG1Q9NUG6 133 aa22.1■■□□□ 1.13
TCF3-219ENST00000610756 SCN10AQ9Y5Y9 1956 aa22.1■■□□□ 1.13
TCF3-219ENST00000610756 SORBS3O60504 671 aa22.09■■□□□ 1.13
TCF3-219ENST00000610756 CLK2P49760 499 aaKnown RBP22.09■■□□□ 1.13
TCF3-219ENST00000610756 PSEN2P49810 448 aa22.09■■□□□ 1.13
TCF3-219ENST00000610756 CHMP4BP1P59074 171 aa22.09■■□□□ 1.13
TCF3-219ENST00000610756 CCT2P78371 535 aaKnown RBP22.09■■□□□ 1.13
TCF3-219ENST00000610756 AKAP17AQ02040 695 aaKnown RBP22.09■■□□□ 1.13
TCF3-219ENST00000610756 PPP1R13LQ8WUF5 828 aa22.09■■□□□ 1.13
TCF3-219ENST00000610756 PHKBQ93100 1093 aa22.09■■□□□ 1.13
TCF3-219ENST00000610756 C16orf70Q9BSU1 422 aa22.09■■□□□ 1.13
TCF3-219ENST00000610756 RNF26Q9BY78 433 aaPredicted RBP22.09■■□□□ 1.13
TCF3-219ENST00000610756 ZMYND12Q9H0C1 365 aa22.09■■□□□ 1.13
TCF3-219ENST00000610756 UMODL1Q5DID0 1318 aa22.09■■□□□ 1.13
TCF3-219ENST00000610756 ESYT2A0FGR8 921 aa22.08■■□□□ 1.13
TCF3-219ENST00000610756 CCL23P55773 120 aa22.08■■□□□ 1.13
TCF3-219ENST00000610756 MFSD10Q14728 455 aa22.08■■□□□ 1.13
TCF3-219ENST00000610756 PTGISQ16647 500 aa22.08■■□□□ 1.13
TCF3-219ENST00000610756 KIAA0753Q2KHM9 967 aa22.08■■□□□ 1.13
TCF3-219ENST00000610756 TMEM240Q5SV17 173 aa22.08■■□□□ 1.13
TCF3-219ENST00000610756 C7orf31Q8N865 590 aa22.08■■□□□ 1.13
TCF3-219ENST00000610756 CCDC12Q8WUD4 166 aaPredicted RBP22.08■■□□□ 1.13
TCF3-219ENST00000610756 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.08■■□□□ 1.131e-6■■□□□ 12.7
TCF3-219ENST00000610756 WNT8AQ9H1J5 351 aa22.08■■□□□ 1.13
TCF3-219ENST00000610756 IL23AQ9NPF7 189 aa22.08■■□□□ 1.13
TCF3-219ENST00000610756 JADE2Q9NQC1 790 aa22.08■■□□□ 1.13
TCF3-219ENST00000610756 GTF2IRD1Q9UHL9 959 aa22.08■■□□□ 1.13
TCF3-219ENST00000610756 NOP56O00567 594 aaKnown RBP22.07■■□□□ 1.12
TCF3-219ENST00000610756 ATP9AO75110 1047 aa22.07■■□□□ 1.12
TCF3-219ENST00000610756 ZNF286BP0CG31 522 aa22.07■■□□□ 1.12
TCF3-219ENST00000610756 AP3B2Q13367 1082 aa22.07■■□□□ 1.12
TCF3-219ENST00000610756 MTMR1Q13613 665 aa22.07■■□□□ 1.12
TCF3-219ENST00000610756 MCTP2Q6DN12 878 aa22.07■■□□□ 1.12
TCF3-219ENST00000610756 GDF6Q6KF10 455 aaPredicted RBP22.07■■□□□ 1.12
TCF3-219ENST00000610756 IL17RAQ96F46 866 aa22.07■■□□□ 1.12
TCF3-219ENST00000610756 RNPC3Q96LT9 517 aaKnown RBP22.07■■□□□ 1.12
TCF3-219ENST00000610756 GPR20Q99678 358 aa22.07■■□□□ 1.12
TCF3-219ENST00000610756 NCOA5Q9HCD5 579 aaKnown RBP22.07■■□□□ 1.12
TCF3-219ENST00000610756 HDAC6Q9UBN7 1215 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms