RNA–Protein interactions for RNA: ENST00000603621.1

TUBE1-204, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-204ENST00000603621 TRPV6Q9H1D0 765 aa16.53■□□□□ 0.24
TUBE1-204ENST00000603621 MLXIPQ9HAP2 919 aa16.53■□□□□ 0.24
TUBE1-204ENST00000603621 RIC8AQ9NPQ8 531 aa16.53■□□□□ 0.24
TUBE1-204ENST00000603621 TMEM260Q9NX78 707 aa16.53■□□□□ 0.24
TUBE1-204ENST00000603621 CPLX1O14810 134 aa16.52■□□□□ 0.24
TUBE1-204ENST00000603621 B4GALT4O60513 344 aa16.52■□□□□ 0.24
TUBE1-204ENST00000603621 STAM2O75886 525 aa16.52■□□□□ 0.24
TUBE1-204ENST00000603621 FXR1P51114 621 aaKnown RBP eCLIP16.52■□□□□ 0.24
TUBE1-204ENST00000603621 ANAPC15P60006 121 aa16.52■□□□□ 0.24
TUBE1-204ENST00000603621 NTRK3Q16288 839 aa16.52■□□□□ 0.24
TUBE1-204ENST00000603621 DGKDQ16760 1214 aa16.52■□□□□ 0.24
TUBE1-204ENST00000603621 CELF3Q5SZQ8 465 aaKnown RBP16.52■□□□□ 0.24
TUBE1-204ENST00000603621 MYSM1Q5VVJ2 828 aa16.52■□□□□ 0.24
TUBE1-204ENST00000603621 NLRX1Q86UT6 975 aa16.52■□□□□ 0.24
TUBE1-204ENST00000603621 TDHQ8IZJ6 230 aa16.52■□□□□ 0.24
TUBE1-204ENST00000603621 ZNF274Q96GC6 653 aaPredicted RBP16.52■□□□□ 0.24
TUBE1-204ENST00000603621 SPATA33Q96N06 139 aa16.52■□□□□ 0.24
TUBE1-204ENST00000603621 INPP4AQ96PE3 977 aaPredicted RBP16.52■□□□□ 0.24
TUBE1-204ENST00000603621 BCAS3Q9H6U6 928 aa16.52■□□□□ 0.24
TUBE1-204ENST00000603621 EHMT1Q9H9B1 1298 aa16.52■□□□□ 0.24
TUBE1-204ENST00000603621 FIBPO43427 364 aa16.51■□□□□ 0.23
TUBE1-204ENST00000603621 CD4P01730 458 aa16.51■□□□□ 0.23
TUBE1-204ENST00000603621 TGFB3P10600 412 aa16.51■□□□□ 0.23
TUBE1-204ENST00000603621 IFNAR1P17181 557 aa16.51■□□□□ 0.23
TUBE1-204ENST00000603621 SEMA3FQ13275 785 aa16.51■□□□□ 0.23
TUBE1-204ENST00000603621 PKN1Q16512 942 aa16.51■□□□□ 0.23
TUBE1-204ENST00000603621 JAKMIP3Q5VZ66 844 aa16.51■□□□□ 0.23
TUBE1-204ENST00000603621 XRRA1Q6P2D8 792 aa16.51■□□□□ 0.23
TUBE1-204ENST00000603621 PPTC7Q8NI37 304 aa16.51■□□□□ 0.23
TUBE1-204ENST00000603621 ALG1Q9BT22 464 aa16.51■□□□□ 0.23
TUBE1-204ENST00000603621 RNF26Q9BY78 433 aaPredicted RBP16.51■□□□□ 0.23
TUBE1-204ENST00000603621 SEZ6LQ9BYH1 1024 aa16.51■□□□□ 0.23
TUBE1-204ENST00000603621 ALDH8A1Q9H2A2 487 aaPredicted RBP16.51■□□□□ 0.23
TUBE1-204ENST00000603621 TRMT13Q9NUP7 481 aaKnown RBP16.51■□□□□ 0.23
TUBE1-204ENST00000603621 TBX21Q9UL17 535 aa16.51■□□□□ 0.23
TUBE1-204ENST00000603621 TRIP12Q14669 1992 aaPredicted RBP16.51■□□□□ 0.23
TUBE1-204ENST00000603621 A0A1W2PPC1 479 aa16.5■□□□□ 0.23
TUBE1-204ENST00000603621 SPATA31C2B4DYI2 1134 aa16.5■□□□□ 0.23
TUBE1-204ENST00000603621 TIMP1P01033 207 aa16.5■□□□□ 0.23
TUBE1-204ENST00000603621 ZNF286BP0CG31 522 aa16.5■□□□□ 0.23
TUBE1-204ENST00000603621 ICAM3P32942 547 aa16.5■□□□□ 0.23
TUBE1-204ENST00000603621 SP4Q02446 784 aa16.5■□□□□ 0.23
TUBE1-204ENST00000603621 SSRP1Q08945 709 aaKnown RBP16.5■□□□□ 0.23
TUBE1-204ENST00000603621 NEDD9Q14511 834 aa16.5■□□□□ 0.23
TUBE1-204ENST00000603621 HSDL1Q3SXM5 330 aa16.5■□□□□ 0.23
TUBE1-204ENST00000603621 CYFIP1Q7L576 1253 aa16.5■□□□□ 0.23
TUBE1-204ENST00000603621 TRIM22Q8IYM9 498 aa16.5■□□□□ 0.23
TUBE1-204ENST00000603621 EMID1Q96A84 441 aaPredicted RBP16.5■□□□□ 0.23
TUBE1-204ENST00000603621 ANO3Q9BYT9 981 aa16.5■□□□□ 0.23
TUBE1-204ENST00000603621 GLT8D2Q9H1C3 349 aa16.5■□□□□ 0.23
TUBE1-204ENST00000603621 PKD2L1Q9P0L9 805 aa16.5■□□□□ 0.23
TUBE1-204ENST00000603621 NOP56O00567 594 aaKnown RBP16.49■□□□□ 0.23
TUBE1-204ENST00000603621 FOSP01100 380 aaPredicted RBP16.49■□□□□ 0.23
TUBE1-204ENST00000603621 CYP2C9P11712 490 aa16.49■□□□□ 0.23
TUBE1-204ENST00000603621 CYP2C18P33260 490 aa16.49■□□□□ 0.23
TUBE1-204ENST00000603621 AK2P54819 239 aa16.49■□□□□ 0.23
TUBE1-204ENST00000603621 FPGSQ05932 587 aa16.49■□□□□ 0.23
TUBE1-204ENST00000603621 CCDC12Q8WUD4 166 aaPredicted RBP16.49■□□□□ 0.23
TUBE1-204ENST00000603621 KAT2BQ92831 832 aa16.49■□□□□ 0.23
TUBE1-204ENST00000603621 SLKQ9H2G2 1235 aaPredicted RBP16.49■□□□□ 0.23
TUBE1-204ENST00000603621 C6orf50Q9HD87 102 aa16.49■□□□□ 0.23
TUBE1-204ENST00000603621 VPS54Q9P1Q0 977 aa16.49■□□□□ 0.23
TUBE1-204ENST00000603621 TPCN1Q9ULQ1 816 aa16.49■□□□□ 0.23
TUBE1-204ENST00000603621 UMODL1Q5DID0 1318 aa16.48■□□□□ 0.23
TUBE1-204ENST00000603621 SOX1O00570 391 aaPredicted RBP16.48■□□□□ 0.23
TUBE1-204ENST00000603621 ADAMTS3O15072 1205 aa16.48■□□□□ 0.23
TUBE1-204ENST00000603621 DTNBO60941 627 aa16.48■□□□□ 0.23
TUBE1-204ENST00000603621 ITGB5P18084 799 aa16.48■□□□□ 0.23
TUBE1-204ENST00000603621 PSEN2P49810 448 aa16.48■□□□□ 0.23
TUBE1-204ENST00000603621 NEK4P51957 841 aa16.48■□□□□ 0.23
TUBE1-204ENST00000603621 SCRN1Q12765 414 aa16.48■□□□□ 0.23
TUBE1-204ENST00000603621 SHHQ15465 462 aa16.48■□□□□ 0.23
TUBE1-204ENST00000603621 C8orf34Q49A92 452 aa16.48■□□□□ 0.23
TUBE1-204ENST00000603621 C9orf50Q5SZB4 431 aa16.48■□□□□ 0.23
TUBE1-204ENST00000603621 NFRKBQ6P4R8 1299 aa16.48■□□□□ 0.23
TUBE1-204ENST00000603621 CPLX2Q6PUV4 134 aaKnown RBP16.48■□□□□ 0.23
TUBE1-204ENST00000603621 GPRASP2Q96D09 838 aa16.48■□□□□ 0.23
TUBE1-204ENST00000603621 HIPK3Q9H422 1215 aa16.48■□□□□ 0.23
TUBE1-204ENST00000603621 NOD1Q9Y239 953 aa16.48■□□□□ 0.23
TUBE1-204ENST00000603621 UBIAD1Q9Y5Z9 338 aa16.48■□□□□ 0.23
TUBE1-204ENST00000603621 KAT6AQ92794 2004 aa16.48■□□□□ 0.23
TUBE1-204ENST00000603621 ATP9AO75110 1047 aa16.47■□□□□ 0.23
TUBE1-204ENST00000603621 PPFIA4O75335 1185 aa16.47■□□□□ 0.23
TUBE1-204ENST00000603621 SUPT20HL2P0C7V6 817 aa16.47■□□□□ 0.23
TUBE1-204ENST00000603621 GNA11P29992 359 aa16.47■□□□□ 0.23
TUBE1-204ENST00000603621 ZNF76P36508 570 aa16.47■□□□□ 0.23
TUBE1-204ENST00000603621 CLK2P49760 499 aaKnown RBP16.47■□□□□ 0.23
TUBE1-204ENST00000603621 EPHB4P54760 987 aa16.47■□□□□ 0.23
TUBE1-204ENST00000603621 CCL23P55773 120 aa16.47■□□□□ 0.23
TUBE1-204ENST00000603621 AP3B2Q13367 1082 aa16.47■□□□□ 0.23
TUBE1-204ENST00000603621 MTMR1Q13613 665 aa16.47■□□□□ 0.23
TUBE1-204ENST00000603621 MFSD10Q14728 455 aa16.47■□□□□ 0.23
TUBE1-204ENST00000603621 ANKRD1Q15327 319 aa16.47■□□□□ 0.23
TUBE1-204ENST00000603621 MFSD5Q6N075 450 aa16.47■□□□□ 0.23
TUBE1-204ENST00000603621 METTL7BQ6UX53 244 aa16.47■□□□□ 0.23
TUBE1-204ENST00000603621 TMEM199Q8N511 208 aa16.47■□□□□ 0.23
TUBE1-204ENST00000603621 CYP2W1Q8TAV3 490 aa16.47■□□□□ 0.23
TUBE1-204ENST00000603621 RASGRP4Q8TDF6 673 aa16.47■□□□□ 0.23
TUBE1-204ENST00000603621 LRCH3Q96II8 777 aa16.47■□□□□ 0.23
TUBE1-204ENST00000603621 CDHR1Q96JP9 859 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms