RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 C7orf61Q8IZ16 206 aa22.94■■□□□ 1.26
SSBP4-210ENST00000601444 ALG1Q9BT22 464 aa22.94■■□□□ 1.26
SSBP4-210ENST00000601444 EHMT1Q9H9B1 1298 aa22.94■■□□□ 1.26
SSBP4-210ENST00000601444 STARD7Q9NQZ5 370 aa22.94■■□□□ 1.26
SSBP4-210ENST00000601444 PCDHA4Q9UN74 947 aa22.94■■□□□ 1.26
SSBP4-210ENST00000601444 ALPK3Q96L96 1907 aa22.94■■□□□ 1.26
SSBP4-210ENST00000601444 A6NJR5 290 aa22.93■■□□□ 1.26
SSBP4-210ENST00000601444 FIBPO43427 364 aa22.93■■□□□ 1.26
SSBP4-210ENST00000601444 GGPS1O95749 300 aa22.93■■□□□ 1.26
SSBP4-210ENST00000601444 MYL3P08590 195 aa22.93■■□□□ 1.26
SSBP4-210ENST00000601444 TGFB3P10600 412 aa22.93■■□□□ 1.26
SSBP4-210ENST00000601444 CPT1AP50416 773 aa22.93■■□□□ 1.26
SSBP4-210ENST00000601444 RTP1P59025 263 aa22.93■■□□□ 1.26
SSBP4-210ENST00000601444 CELF3Q5SZQ8 465 aaKnown RBP22.93■■□□□ 1.26
SSBP4-210ENST00000601444 MYSM1Q5VVJ2 828 aa22.93■■□□□ 1.26
SSBP4-210ENST00000601444 DHX37Q8IY37 1157 aaKnown RBP22.93■■□□□ 1.26
SSBP4-210ENST00000601444 BICD2Q8TD16 824 aa22.93■■□□□ 1.26
SSBP4-210ENST00000601444 CRYGNQ8WXF5 182 aa22.93■■□□□ 1.26
SSBP4-210ENST00000601444 VTI1AQ96AJ9 217 aa22.93■■□□□ 1.26
SSBP4-210ENST00000601444 GLT1D1Q96MS3 346 aa22.93■■□□□ 1.26
SSBP4-210ENST00000601444 M0R2N6 131 aa22.92■■□□□ 1.26
SSBP4-210ENST00000601444 ATP9AO75110 1047 aa22.92■■□□□ 1.26
SSBP4-210ENST00000601444 FOSBP53539 338 aa22.92■■□□□ 1.26
SSBP4-210ENST00000601444 PSMC6P62333 389 aa22.92■■□□□ 1.26
SSBP4-210ENST00000601444 ARHGAP4P98171 946 aa22.92■■□□□ 1.26
SSBP4-210ENST00000601444 SNX17Q15036 470 aa22.92■■□□□ 1.26
SSBP4-210ENST00000601444 TRIM60Q495X7 471 aa22.92■■□□□ 1.26
SSBP4-210ENST00000601444 NLRX1Q86UT6 975 aa22.92■■□□□ 1.26
SSBP4-210ENST00000601444 BLIDQ8IZY5 108 aa22.92■■□□□ 1.26
SSBP4-210ENST00000601444 MXRA8Q9BRK3 442 aa22.92■■□□□ 1.26
SSBP4-210ENST00000601444 PHF20Q9BVI0 1012 aa22.92■■□□□ 1.26
SSBP4-210ENST00000601444 JADE2Q9NQC1 790 aa22.92■■□□□ 1.26
SSBP4-210ENST00000601444 SH2B1Q9NRF2 756 aaPredicted RBP22.92■■□□□ 1.26
SSBP4-210ENST00000601444 ATP11BQ9Y2G3 1177 aa22.92■■□□□ 1.26
SSBP4-210ENST00000601444 TELO2Q9Y4R8 837 aa22.92■■□□□ 1.26
SSBP4-210ENST00000601444 GRIN2DO15399 1336 aa22.91■■□□□ 1.26
SSBP4-210ENST00000601444 EDIL3O43854 480 aa22.91■■□□□ 1.26
SSBP4-210ENST00000601444 ZEB2O60315 1214 aa22.91■■□□□ 1.26
SSBP4-210ENST00000601444 MMP3P08254 477 aa22.91■■□□□ 1.26
SSBP4-210ENST00000601444 PURAQ00577 322 aaKnown RBP22.91■■□□□ 1.26
SSBP4-210ENST00000601444 LAMC2Q13753 1193 aa22.91■■□□□ 1.26
SSBP4-210ENST00000601444 EMID1Q96A84 441 aaPredicted RBP22.91■■□□□ 1.26
SSBP4-210ENST00000601444 GPRASP2Q96D09 838 aa22.91■■□□□ 1.26
SSBP4-210ENST00000601444 PKD2L1Q9P0L9 805 aa22.91■■□□□ 1.26
SSBP4-210ENST00000601444 ELP1O95163 1332 aa22.9■■□□□ 1.26
SSBP4-210ENST00000601444 H0YGN5 161 aa22.9■■□□□ 1.26
SSBP4-210ENST00000601444 MTMR1Q13613 665 aa22.9■■□□□ 1.26
SSBP4-210ENST00000601444 HSDL1Q3SXM5 330 aa22.9■■□□□ 1.26
SSBP4-210ENST00000601444 CYFIP1Q7L576 1253 aa22.9■■□□□ 1.26
SSBP4-210ENST00000601444 DAGLBQ8NCG7 672 aa22.9■■□□□ 1.26
SSBP4-210ENST00000601444 OXER1Q8TDS5 423 aa22.9■■□□□ 1.26
SSBP4-210ENST00000601444 PPP1R13LQ8WUF5 828 aa22.9■■□□□ 1.26
SSBP4-210ENST00000601444 WASF1Q92558 559 aa22.9■■□□□ 1.26
SSBP4-210ENST00000601444 SPATA33Q96N06 139 aa22.9■■□□□ 1.26
SSBP4-210ENST00000601444 MLXIPQ9HAP2 919 aa22.9■■□□□ 1.26
SSBP4-210ENST00000601444 FAM86B1E9PN63 330 aa22.89■■□□□ 1.25
SSBP4-210ENST00000601444 FAM86B2P0C5J1 330 aa22.89■■□□□ 1.25
SSBP4-210ENST00000601444 ARP10275 920 aa22.89■■□□□ 1.25
SSBP4-210ENST00000601444 CEP55Q53EZ4 464 aa22.89■■□□□ 1.25
SSBP4-210ENST00000601444 C1orf53Q5VUE5 145 aa22.89■■□□□ 1.25
SSBP4-210ENST00000601444 MCTP2Q6DN12 878 aa22.89■■□□□ 1.25
SSBP4-210ENST00000601444 TMX3Q96JJ7 454 aa22.89■■□□□ 1.25
SSBP4-210ENST00000601444 LLPHQ9BRT6 129 aaKnown RBP22.89■■□□□ 1.25
SSBP4-210ENST00000601444 KCNH7Q9NS40 1196 aa22.89■■□□□ 1.25
SSBP4-210ENST00000601444 POLR3EQ9NVU0 708 aa22.89■■□□□ 1.25
SSBP4-210ENST00000601444 CYP3A4P08684 503 aa22.88■■□□□ 1.25
SSBP4-210ENST00000601444 KCNA2P16389 499 aa22.88■■□□□ 1.25
SSBP4-210ENST00000601444 SYN1P17600 705 aa22.88■■□□□ 1.25
SSBP4-210ENST00000601444 XBP1P17861 261 aa22.88■■□□□ 1.25
SSBP4-210ENST00000601444 ZNF76P36508 570 aa22.88■■□□□ 1.25
SSBP4-210ENST00000601444 CDK7P50613 346 aa22.88■■□□□ 1.25
SSBP4-210ENST00000601444 TLE2Q04725 743 aa22.88■■□□□ 1.25
SSBP4-210ENST00000601444 BRDTQ58F21 947 aaPredicted RBP22.88■■□□□ 1.25
SSBP4-210ENST00000601444 GALNT17Q6IS24 598 aa22.88■■□□□ 1.25
SSBP4-210ENST00000601444 FAM177A1Q8N128 213 aaPredicted RBP22.88■■□□□ 1.25
SSBP4-210ENST00000601444 PPTC7Q8NI37 304 aa22.88■■□□□ 1.25
SSBP4-210ENST00000601444 UIMC1Q96RL1 719 aa22.88■■□□□ 1.25
SSBP4-210ENST00000601444 MTG1Q9BT17 334 aaPredicted RBP22.88■■□□□ 1.25
SSBP4-210ENST00000601444 ZMYND8Q9ULU4 1186 aaPredicted RBP22.88■■□□□ 1.25
SSBP4-210ENST00000601444 NR2E3Q9Y5X4 410 aa22.88■■□□□ 1.25
SSBP4-210ENST00000601444 A0A0U1RQG5 324 aaPredicted RBP22.87■■□□□ 1.25
SSBP4-210ENST00000601444 ARVCFO00192 962 aa22.87■■□□□ 1.25
SSBP4-210ENST00000601444 MEIS1O00470 390 aa22.87■■□□□ 1.25
SSBP4-210ENST00000601444 PQBP1O60828 265 aaKnown RBP22.87■■□□□ 1.25
SSBP4-210ENST00000601444 CABYRO75952 493 aa22.87■■□□□ 1.25
SSBP4-210ENST00000601444 SP4Q02446 784 aa22.87■■□□□ 1.25
SSBP4-210ENST00000601444 ITGA7Q13683 1181 aa22.87■■□□□ 1.25
SSBP4-210ENST00000601444 NEDD9Q14511 834 aa22.87■■□□□ 1.25
SSBP4-210ENST00000601444 TBCKQ8TEA7 893 aa22.87■■□□□ 1.25
SSBP4-210ENST00000601444 SENP7Q9BQF6 1050 aa22.87■■□□□ 1.25
SSBP4-210ENST00000601444 IGLV3-22A0A075B6J6 115 aa22.86■■□□□ 1.25
SSBP4-210ENST00000601444 DGKDQ16760 1214 aa22.86■■□□□ 1.25
SSBP4-210ENST00000601444 METTL7BQ6UX53 244 aa22.86■■□□□ 1.25
SSBP4-210ENST00000601444 SLC43A3Q8NBI5 491 aa22.86■■□□□ 1.25
SSBP4-210ENST00000601444 KAT2BQ92831 832 aa22.86■■□□□ 1.25
SSBP4-210ENST00000601444 CDHR1Q96JP9 859 aa22.86■■□□□ 1.25
SSBP4-210ENST00000601444 AGO4Q9HCK5 861 aaKnown RBP22.86■■□□□ 1.25
SSBP4-210ENST00000601444 MAFGO15525 162 aa22.85■■□□□ 1.25
SSBP4-210ENST00000601444 KPNA6O60684 536 aa22.85■■□□□ 1.25
SSBP4-210ENST00000601444 ZNF286BP0CG31 522 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms