RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 VSIG10LQ86VR7 867 aa21.5■■□□□ 1.03
CCDC9-205ENST00000600117 TRPV1Q8NER1 839 aa21.5■■□□□ 1.03
CCDC9-205ENST00000600117 EHMT1Q9H9B1 1298 aa21.5■■□□□ 1.03
CCDC9-205ENST00000600117 DDX20Q9UHI6 824 aaKnown RBP21.5■■□□□ 1.03
CCDC9-205ENST00000600117 FAM205CA6NFA0 338 aa21.49■■□□□ 1.03
CCDC9-205ENST00000600117 B4DLN1 442 aa21.49■■□□□ 1.03
CCDC9-205ENST00000600117 KIF28PB7ZC32 967 aa21.49■■□□□ 1.03
CCDC9-205ENST00000600117 DNM1LO00429 736 aa21.49■■□□□ 1.03
CCDC9-205ENST00000600117 MYCLP12524 364 aaPredicted RBP21.49■■□□□ 1.03
CCDC9-205ENST00000600117 CYBAP13498 195 aa21.49■■□□□ 1.03
CCDC9-205ENST00000600117 MRPS9P82933 396 aaKnown RBP21.49■■□□□ 1.03
CCDC9-205ENST00000600117 ARHGAP4P98171 946 aa21.49■■□□□ 1.03
CCDC9-205ENST00000600117 PDE4DQ08499 809 aa21.49■■□□□ 1.03
CCDC9-205ENST00000600117 PRAMEF19Q5SWL8 479 aa21.49■■□□□ 1.03
CCDC9-205ENST00000600117 XRRA1Q6P2D8 792 aa21.49■■□□□ 1.03
CCDC9-205ENST00000600117 SYMPKQ92797 1274 aaKnown RBP21.49■■□□□ 1.03
CCDC9-205ENST00000600117 MPHOSPH6Q99547 160 aaKnown RBP21.49■■□□□ 1.03
CCDC9-205ENST00000600117 FOXP1Q9H334 677 aaPredicted RBP21.49■■□□□ 1.03
CCDC9-205ENST00000600117 BDP1A6H8Y1 2624 aa21.49■■□□□ 1.03
CCDC9-205ENST00000600117 H3BQV1 296 aa21.48■■□□□ 1.03
CCDC9-205ENST00000600117 ZNF865P0CJ78 1059 aaPredicted RBP21.48■■□□□ 1.03
CCDC9-205ENST00000600117 CCND2P30279 289 aa21.48■■□□□ 1.03
CCDC9-205ENST00000600117 RTP1P59025 263 aa21.48■■□□□ 1.03
CCDC9-205ENST00000600117 NONOQ15233 471 aaKnown RBP eCLIP21.48■■□□□ 1.03
CCDC9-205ENST00000600117 SHHQ15465 462 aa21.48■■□□□ 1.03
CCDC9-205ENST00000600117 STXBP2Q15833 593 aa21.48■■□□□ 1.03
CCDC9-205ENST00000600117 FBXO16Q8IX29 292 aaPredicted RBP21.48■■□□□ 1.03
CCDC9-205ENST00000600117 ZFP91Q96JP5 570 aaPredicted RBP21.48■■□□□ 1.03
CCDC9-205ENST00000600117 NRBP1Q9UHY1 535 aa21.48■■□□□ 1.03
CCDC9-205ENST00000600117 CCDC194A0A1B0GVG4 234 aa21.47■■□□□ 1.03
CCDC9-205ENST00000600117 RGS20O76081 388 aa21.47■■□□□ 1.03
CCDC9-205ENST00000600117 CYP3A4P08684 503 aa21.47■■□□□ 1.03
CCDC9-205ENST00000600117 U2AF2P26368 475 aaKnown RBP eCLIP21.47■■□□□ 1.03
CCDC9-205ENST00000600117 ACVR2BQ13705 512 aa21.47■■□□□ 1.03
CCDC9-205ENST00000600117 TAPT1Q6NXT6 567 aa21.47■■□□□ 1.03
CCDC9-205ENST00000600117 PIK3AP1Q6ZUJ8 805 aa21.47■■□□□ 1.03
CCDC9-205ENST00000600117 EEPD1Q7L9B9 569 aa21.47■■□□□ 1.03
CCDC9-205ENST00000600117 TBCKQ8TEA7 893 aa21.47■■□□□ 1.03
CCDC9-205ENST00000600117 MYLIPQ8WY64 445 aa21.47■■□□□ 1.03
CCDC9-205ENST00000600117 ABHD16BQ9H3Z7 469 aa21.47■■□□□ 1.03
CCDC9-205ENST00000600117 VTA1Q9NP79 307 aa21.47■■□□□ 1.03
CCDC9-205ENST00000600117 MTMR6Q9Y217 621 aa21.47■■□□□ 1.03
CCDC9-205ENST00000600117 CNPY2Q9Y2B0 182 aa21.47■■□□□ 1.03
CCDC9-205ENST00000600117 KIAA1217Q5T5P2 1943 aa21.47■■□□□ 1.03
CCDC9-205ENST00000600117 EIF3JO75822 258 aaKnown RBP21.46■■□□□ 1.03
CCDC9-205ENST00000600117 SMAD3P84022 425 aaKnown RBP21.46■■□□□ 1.03
CCDC9-205ENST00000600117 INF2Q27J81 1249 aa21.46■■□□□ 1.03
CCDC9-205ENST00000600117 INPP4AQ96PE3 977 aaPredicted RBP21.46■■□□□ 1.03
CCDC9-205ENST00000600117 TTYH1Q9H313 450 aaPredicted RBP21.46■■□□□ 1.03
CCDC9-205ENST00000600117 UBIAD1Q9Y5Z9 338 aa21.46■■□□□ 1.03
CCDC9-205ENST00000600117 RBM47A0AV96 593 aaKnown RBP21.45■■□□□ 1.02
CCDC9-205ENST00000600117 VPS37CA5D8V6 355 aaPredicted RBP21.45■■□□□ 1.02
CCDC9-205ENST00000600117 STX6O43752 255 aa21.45■■□□□ 1.02
CCDC9-205ENST00000600117 STAM2O75886 525 aa21.45■■□□□ 1.02
CCDC9-205ENST00000600117 CNGA1P29973 690 aa21.45■■□□□ 1.02
CCDC9-205ENST00000600117 C9orf50Q5SZB4 431 aa21.45■■□□□ 1.02
CCDC9-205ENST00000600117 NOSTRINQ8IVI9 506 aa21.45■■□□□ 1.02
CCDC9-205ENST00000600117 PDGFCQ9NRA1 345 aa21.45■■□□□ 1.02
CCDC9-205ENST00000600117 ZHX1Q9UKY1 873 aaPredicted RBP21.45■■□□□ 1.02
CCDC9-205ENST00000600117 ATP11BQ9Y2G3 1177 aa21.45■■□□□ 1.02
CCDC9-205ENST00000600117 ITGB5P18084 799 aa21.44■■□□□ 1.02
CCDC9-205ENST00000600117 CIITAP33076 1130 aa21.44■■□□□ 1.02
CCDC9-205ENST00000600117 MCTP1Q6DN14 999 aa21.44■■□□□ 1.02
CCDC9-205ENST00000600117 RTEL1Q9NZ71 1219 aa21.44■■□□□ 1.02
CCDC9-205ENST00000600117 FOSL2P15408 326 aa21.43■■□□□ 1.02
CCDC9-205ENST00000600117 USP11P51784 963 aa21.43■■□□□ 1.02
CCDC9-205ENST00000600117 SEMA3FQ13275 785 aa21.43■■□□□ 1.02
CCDC9-205ENST00000600117 NEK8Q86SG6 692 aa21.43■■□□□ 1.02
CCDC9-205ENST00000600117 ARRDC4Q8NCT1 418 aa21.43■■□□□ 1.02
CCDC9-205ENST00000600117 MXRA8Q9BRK3 442 aa21.43■■□□□ 1.02
CCDC9-205ENST00000600117 IGLV3-22A0A075B6J6 115 aa21.42■■□□□ 1.02
CCDC9-205ENST00000600117 FAM86B1E9PN63 330 aa21.42■■□□□ 1.02
CCDC9-205ENST00000600117 WNT7AO00755 349 aa21.42■■□□□ 1.02
CCDC9-205ENST00000600117 ADCY6O43306 1168 aa21.42■■□□□ 1.02
CCDC9-205ENST00000600117 FAM86B2P0C5J1 330 aa21.42■■□□□ 1.02
CCDC9-205ENST00000600117 ICAM3P32942 547 aa21.42■■□□□ 1.02
CCDC9-205ENST00000600117 ADCYAP1R1P41586 468 aa21.42■■□□□ 1.02
CCDC9-205ENST00000600117 GNL2Q13823 731 aaKnown RBP21.42■■□□□ 1.02
CCDC9-205ENST00000600117 CCDC144BQ3MJ40 725 aa21.42■■□□□ 1.02
CCDC9-205ENST00000600117 CEP55Q53EZ4 464 aa21.42■■□□□ 1.02
CCDC9-205ENST00000600117 CCDC62Q6P9F0 684 aa21.42■■□□□ 1.02
CCDC9-205ENST00000600117 SLC39A5Q6ZMH5 540 aa21.42■■□□□ 1.02
CCDC9-205ENST00000600117 SEPT14Q6ZU15 432 aa21.42■■□□□ 1.02
CCDC9-205ENST00000600117 CYP2W1Q8TAV3 490 aa21.42■■□□□ 1.02
CCDC9-205ENST00000600117 MBOAT7Q96N66 472 aa21.42■■□□□ 1.02
CCDC9-205ENST00000600117 JADE2Q9NQC1 790 aa21.42■■□□□ 1.02
CCDC9-205ENST00000600117 TMEM265A0A087WTH1 108 aa21.41■■□□□ 1.02
CCDC9-205ENST00000600117 CYP3A7-CYP3A51PA0A087WV96 503 aa21.41■■□□□ 1.02
CCDC9-205ENST00000600117 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.41■■□□□ 1.02
CCDC9-205ENST00000600117 MEIS1O00470 390 aa21.41■■□□□ 1.02
CCDC9-205ENST00000600117 SEPT4O43236 478 aa21.41■■□□□ 1.02
CCDC9-205ENST00000600117 ARIH2O95376 493 aa21.41■■□□□ 1.02
CCDC9-205ENST00000600117 TDP2O95551 362 aa21.41■■□□□ 1.02
CCDC9-205ENST00000600117 CYP3A7P24462 503 aa21.41■■□□□ 1.02
CCDC9-205ENST00000600117 DDIT3P35638 169 aa21.41■■□□□ 1.02
CCDC9-205ENST00000600117 RESTQ13127 1097 aa21.41■■□□□ 1.02
CCDC9-205ENST00000600117 PKP1Q13835 747 aa21.41■■□□□ 1.02
CCDC9-205ENST00000600117 SNX17Q15036 470 aa21.41■■□□□ 1.02
CCDC9-205ENST00000600117 TMEM63BQ5T3F8 832 aa21.41■■□□□ 1.02
CCDC9-205ENST00000600117 GJC2Q5T442 439 aaPredicted RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms