RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 PCNX4Q63HM2 1172 aa20.65■□□□□ 0.9
CHMP2A-203ENST00000597209 MICU3Q86XE3 530 aa20.65■□□□□ 0.9
CHMP2A-203ENST00000597209 RETREG2Q8NC44 543 aa20.65■□□□□ 0.9
CHMP2A-203ENST00000597209 SCLYQ96I15 445 aa20.65■□□□□ 0.9
CHMP2A-203ENST00000597209 CDX2Q99626 313 aaPredicted RBP20.65■□□□□ 0.9
CHMP2A-203ENST00000597209 PSTPIP2Q9H939 334 aa20.65■□□□□ 0.9
CHMP2A-203ENST00000597209 NOD1Q9Y239 953 aa20.65■□□□□ 0.9
CHMP2A-203ENST00000597209 SPATA31C2B4DYI2 1134 aa20.64■□□□□ 0.89
CHMP2A-203ENST00000597209 NEDD9Q14511 834 aa20.64■□□□□ 0.89
CHMP2A-203ENST00000597209 GDF6Q6KF10 455 aaPredicted RBP20.64■□□□□ 0.89
CHMP2A-203ENST00000597209 RAB11FIP4Q86YS3 637 aa20.64■□□□□ 0.89
CHMP2A-203ENST00000597209 TEX2Q8IWB9 1127 aa20.64■□□□□ 0.89
CHMP2A-203ENST00000597209 CCDC155Q8N6L0 562 aa20.64■□□□□ 0.89
CHMP2A-203ENST00000597209 CAGE1Q8TC20 777 aa20.64■□□□□ 0.89
CHMP2A-203ENST00000597209 PPP1R13LQ8WUF5 828 aa20.64■□□□□ 0.89
CHMP2A-203ENST00000597209 GPKOWQ92917 476 aaPredicted RBP eCLIP20.64■□□□□ 0.89
CHMP2A-203ENST00000597209 CTAGE1Q96RT6 745 aa20.64■□□□□ 0.89
CHMP2A-203ENST00000597209 MLXIPQ9HAP2 919 aa20.64■□□□□ 0.89
CHMP2A-203ENST00000597209 GTF2IRD1Q9UHL9 959 aa20.64■□□□□ 0.89
CHMP2A-203ENST00000597209 ZBTB43O43298 467 aa20.63■□□□□ 0.89
CHMP2A-203ENST00000597209 FIBPO43427 364 aa20.63■□□□□ 0.89
CHMP2A-203ENST00000597209 IQCF3P0C7M6 154 aa20.63■□□□□ 0.89
CHMP2A-203ENST00000597209 RBL2Q08999 1139 aa20.63■□□□□ 0.89
CHMP2A-203ENST00000597209 MFSD10Q14728 455 aa20.63■□□□□ 0.89
CHMP2A-203ENST00000597209 KIAA0753Q2KHM9 967 aa20.63■□□□□ 0.89
CHMP2A-203ENST00000597209 C7orf31Q8N865 590 aa20.63■□□□□ 0.89
CHMP2A-203ENST00000597209 ZFP91Q96JP5 570 aaPredicted RBP20.63■□□□□ 0.89
CHMP2A-203ENST00000597209 CXXC1Q9P0U4 656 aaPredicted RBP20.63■□□□□ 0.89
CHMP2A-203ENST00000597209 HDAC6Q9UBN7 1215 aa20.63■□□□□ 0.89
CHMP2A-203ENST00000597209 BRPF3Q9ULD4 1205 aa20.63■□□□□ 0.89
CHMP2A-203ENST00000597209 HSPA4P34932 840 aa20.62■□□□□ 0.89
CHMP2A-203ENST00000597209 CHMP4BP1P59074 171 aa20.62■□□□□ 0.89
CHMP2A-203ENST00000597209 SEMA3FQ13275 785 aa20.62■□□□□ 0.89
CHMP2A-203ENST00000597209 RTN1Q16799 776 aa20.62■□□□□ 0.89
CHMP2A-203ENST00000597209 OTOP2Q7RTS6 562 aa20.62■□□□□ 0.89
CHMP2A-203ENST00000597209 CCDC82Q8N4S0 544 aa20.62■□□□□ 0.89
CHMP2A-203ENST00000597209 SLC17A8Q8NDX2 589 aa20.62■□□□□ 0.89
CHMP2A-203ENST00000597209 AFAP1L1Q8TED9 768 aa20.62■□□□□ 0.89
CHMP2A-203ENST00000597209 TIFAQ96CG3 184 aa20.62■□□□□ 0.89
CHMP2A-203ENST00000597209 TCEANC2Q96MN5 208 aa20.62■□□□□ 0.89
CHMP2A-203ENST00000597209 SENP7Q9BQF6 1050 aa20.62■□□□□ 0.89
CHMP2A-203ENST00000597209 C16orf70Q9BSU1 422 aa20.62■□□□□ 0.89
CHMP2A-203ENST00000597209 PBX4Q9BYU1 374 aa20.62■□□□□ 0.89
CHMP2A-203ENST00000597209 LAMA2P24043 3122 aaKnown RBP20.61■□□□□ 0.89
CHMP2A-203ENST00000597209 CNTNAP5Q8WYK1 1306 aa20.61■□□□□ 0.89
CHMP2A-203ENST00000597209 TANC1Q9C0D5 1861 aa20.61■□□□□ 0.89
CHMP2A-203ENST00000597209 GRXCR1A8MXD5 290 aa20.61■□□□□ 0.89
CHMP2A-203ENST00000597209 EPB41L2O43491 1005 aaKnown RBP20.61■□□□□ 0.89
CHMP2A-203ENST00000597209 ZNF286BP0CG31 522 aa20.61■□□□□ 0.89
CHMP2A-203ENST00000597209 FUT2Q10981 343 aa20.61■□□□□ 0.89
CHMP2A-203ENST00000597209 RAB30Q15771 203 aa20.61■□□□□ 0.89
CHMP2A-203ENST00000597209 METTL7BQ6UX53 244 aa20.61■□□□□ 0.89
CHMP2A-203ENST00000597209 NLRX1Q86UT6 975 aa20.61■□□□□ 0.89
CHMP2A-203ENST00000597209 ALG1Q9BT22 464 aa20.61■□□□□ 0.89
CHMP2A-203ENST00000597209 RTEL1Q9NZ71 1219 aa20.61■□□□□ 0.89
CHMP2A-203ENST00000597209 hCG_1642624A0A1W2PR95 340 aa20.6■□□□□ 0.89
CHMP2A-203ENST00000597209 hCG_1984214I3L0E3 225 aa20.6■□□□□ 0.89
CHMP2A-203ENST00000597209 REC8O95072 547 aa20.6■□□□□ 0.89
CHMP2A-203ENST00000597209 PARNO95453 639 aaKnown RBP20.6■□□□□ 0.89
CHMP2A-203ENST00000597209 ACTN1P12814 892 aa20.6■□□□□ 0.89
CHMP2A-203ENST00000597209 PTK7Q13308 1070 aa20.6■□□□□ 0.89
CHMP2A-203ENST00000597209 PPP1R18Q6NYC8 613 aa20.6■□□□□ 0.89
CHMP2A-203ENST00000597209 FBXL16Q8N461 479 aa20.6■□□□□ 0.89
CHMP2A-203ENST00000597209 ZNF713Q8N859 430 aaPredicted RBP20.6■□□□□ 0.89
CHMP2A-203ENST00000597209 GPRASP2Q96D09 838 aa20.6■□□□□ 0.89
CHMP2A-203ENST00000597209 ZNF576Q9H609 170 aa20.6■□□□□ 0.89
CHMP2A-203ENST00000597209 SNX14Q9Y5W7 946 aa20.6■□□□□ 0.89
CHMP2A-203ENST00000597209 SLC4A7Q9Y6M7 1214 aa20.6■□□□□ 0.89
CHMP2A-203ENST00000597209 KLF18A0A0U1RQI7 1052 aa20.59■□□□□ 0.89
CHMP2A-203ENST00000597209 GOLGA8AA7E2F4 631 aa20.59■□□□□ 0.89
CHMP2A-203ENST00000597209 GOLGA8BA8MQT2 603 aa20.59■□□□□ 0.89
CHMP2A-203ENST00000597209 SORBS3O60504 671 aa20.59■□□□□ 0.89
CHMP2A-203ENST00000597209 NEFLP07196 543 aa20.59■□□□□ 0.89
CHMP2A-203ENST00000597209 PBX2P40425 430 aa20.59■□□□□ 0.89
CHMP2A-203ENST00000597209 CYFIP1Q7L576 1253 aa20.59■□□□□ 0.89
CHMP2A-203ENST00000597209 HEATR3Q7Z4Q2 680 aa20.59■□□□□ 0.89
CHMP2A-203ENST00000597209 DEFB128Q7Z7B8 93 aa20.59■□□□□ 0.89
CHMP2A-203ENST00000597209 GIMAP8Q8ND71 665 aaPredicted RBP20.59■□□□□ 0.89
CHMP2A-203ENST00000597209 DHX38Q92620 1227 aaKnown RBP20.59■□□□□ 0.89
CHMP2A-203ENST00000597209 CDHR1Q96JP9 859 aa20.59■□□□□ 0.89
CHMP2A-203ENST00000597209 USP26Q9BXU7 913 aa20.59■□□□□ 0.89
CHMP2A-203ENST00000597209 BCAS3Q9H6U6 928 aa20.59■□□□□ 0.89
CHMP2A-203ENST00000597209 FAM217BQ9NTX9 383 aaPredicted RBP20.59■□□□□ 0.89
CHMP2A-203ENST00000597209 MSRAQ9UJ68 235 aa20.59■□□□□ 0.89
CHMP2A-203ENST00000597209 SCN5AQ14524 2016 aa20.58■□□□□ 0.89
CHMP2A-203ENST00000597209 SPDYE3A6NKU9 549 aa20.58■□□□□ 0.89
CHMP2A-203ENST00000597209 SELPP16109 830 aa20.58■□□□□ 0.89
CHMP2A-203ENST00000597209 WWC2Q6AWC2 1192 aa20.58■□□□□ 0.89
CHMP2A-203ENST00000597209 MYLIPQ8WY64 445 aa20.58■□□□□ 0.89
CHMP2A-203ENST00000597209 GPR20Q99678 358 aa20.58■□□□□ 0.89
CHMP2A-203ENST00000597209 PCDHA6Q9UN73 950 aa20.58■□□□□ 0.89
CHMP2A-203ENST00000597209 PCDHA8Q9Y5H6 950 aa20.58■□□□□ 0.89
CHMP2A-203ENST00000597209 UBIAD1Q9Y5Z9 338 aa20.58■□□□□ 0.89
CHMP2A-203ENST00000597209 CCDC196A0A1B0GTZ2 297 aa20.57■□□□□ 0.88
CHMP2A-203ENST00000597209 H3BRB1 525 aa20.57■□□□□ 0.88
CHMP2A-203ENST00000597209 NOP56O00567 594 aaKnown RBP20.57■□□□□ 0.88
CHMP2A-203ENST00000597209 MAFGO15525 162 aa20.57■□□□□ 0.88
CHMP2A-203ENST00000597209 LGALS2P05162 132 aa20.57■□□□□ 0.88
CHMP2A-203ENST00000597209 HOXC8P31273 242 aa20.57■□□□□ 0.88
CHMP2A-203ENST00000597209 FGD1P98174 961 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms