RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 ERICH2A1L162 156 aa12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 LCHNA4D1U4 455 aa12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 HAS3O00219 553 aa12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 OPLAHO14841 1288 aa12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 PPFIA4O75335 1185 aa12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 GGPS1O95749 300 aa12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 CXCL10P02778 98 aa12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 HOXA13P31271 388 aaPredicted RBP12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 ZNF200P98182 395 aaPredicted RBP12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 RBL2Q08999 1139 aa12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 IKBKEQ14164 716 aa12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 PGM5Q15124 567 aa12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 SEC23AQ15436 765 aa12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 CELF3Q5SZQ8 465 aaKnown RBP12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 ZNF618Q5T7W0 954 aa12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 MYSM1Q5VVJ2 828 aa12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 FAM117BQ6P1L5 589 aa12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 CYB5R4Q7L1T6 521 aa12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 SPRED2Q7Z698 418 aa12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 FCHSD1Q86WN1 690 aa12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 SAMD3Q8N6K7 520 aa12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 ZFP91Q96JP5 570 aaPredicted RBP12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 SPATA33Q96N06 139 aa12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 MLXIPQ9HAP2 919 aa12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 MAD2L2Q9UI95 211 aa12.26□□□□□ -0.45
CHMP2A-202ENST00000596708 PALM3A6NDB9 673 aaPredicted RBP12.25□□□□□ -0.45
CHMP2A-202ENST00000596708 GCOM1H8Y6P7 765 aaPredicted RBP12.25□□□□□ -0.45
CHMP2A-202ENST00000596708 IFIT3O14879 490 aaKnown RBP12.25□□□□□ -0.45
CHMP2A-202ENST00000596708 PPP1R11O60927 126 aaPredicted RBP12.25□□□□□ -0.45
CHMP2A-202ENST00000596708 EFCAB14O75071 495 aa12.25□□□□□ -0.45
CHMP2A-202ENST00000596708 RGS20O76081 388 aa12.25□□□□□ -0.45
CHMP2A-202ENST00000596708 F2P00734 622 aa12.25□□□□□ -0.45
CHMP2A-202ENST00000596708 POLR2MP0CAP2 368 aa12.25□□□□□ -0.45
CHMP2A-202ENST00000596708 CCND2P30279 289 aa12.25□□□□□ -0.45
CHMP2A-202ENST00000596708 TRAF1Q13077 416 aa12.25□□□□□ -0.45
CHMP2A-202ENST00000596708 HSDL1Q3SXM5 330 aa12.25□□□□□ -0.45
CHMP2A-202ENST00000596708 STOX1Q6ZVD7 989 aa12.25□□□□□ -0.45
CHMP2A-202ENST00000596708 VSIG10LQ86VR7 867 aa12.25□□□□□ -0.45
CHMP2A-202ENST00000596708 GDPD5Q8WTR4 605 aa12.25□□□□□ -0.45
CHMP2A-202ENST00000596708 HLA-CQ95604 372 aa12.25□□□□□ -0.45
CHMP2A-202ENST00000596708 MTMR8Q96EF0 704 aa12.25□□□□□ -0.45
CHMP2A-202ENST00000596708 PIGSQ96S52 555 aa12.25□□□□□ -0.45
CHMP2A-202ENST00000596708 IL25Q9H293 177 aa12.25□□□□□ -0.45
CHMP2A-202ENST00000596708 RAPGEFL1Q9UHV5 662 aa12.25□□□□□ -0.45
CHMP2A-202ENST00000596708 MTUS1Q9ULD2 1270 aa12.25□□□□□ -0.45
CHMP2A-202ENST00000596708 LPXNO60711 386 aa12.24□□□□□ -0.45
CHMP2A-202ENST00000596708 GJB5O95377 273 aa12.24□□□□□ -0.45
CHMP2A-202ENST00000596708 TGFB3P10600 412 aa12.24□□□□□ -0.45
CHMP2A-202ENST00000596708 THPOP40225 353 aa12.24□□□□□ -0.45
CHMP2A-202ENST00000596708 SP2Q02086 613 aa12.24□□□□□ -0.45
CHMP2A-202ENST00000596708 GHRHRQ02643 423 aa12.24□□□□□ -0.45
CHMP2A-202ENST00000596708 MYO7AQ13402 2215 aa12.24□□□□□ -0.45
CHMP2A-202ENST00000596708 GRM4Q14833 912 aa12.24□□□□□ -0.45
CHMP2A-202ENST00000596708 TCTN1Q2MV58 587 aa12.24□□□□□ -0.45
CHMP2A-202ENST00000596708 IL31RAQ8NI17 732 aa12.24□□□□□ -0.45
CHMP2A-202ENST00000596708 WNT8BQ93098 351 aa12.24□□□□□ -0.45
CHMP2A-202ENST00000596708 TGS1Q96RS0 853 aaKnown RBP12.24□□□□□ -0.45
CHMP2A-202ENST00000596708 RAD9AQ99638 391 aa12.24□□□□□ -0.45
CHMP2A-202ENST00000596708 CHD7Q9P2D1 2997 aa12.24□□□□□ -0.45
CHMP2A-202ENST00000596708 CHD9Q3L8U1 2897 aa12.24□□□□□ -0.45
CHMP2A-202ENST00000596708 C17orf102A2RUQ5 167 aa12.23□□□□□ -0.45
CHMP2A-202ENST00000596708 RSPH10B2B2RC85 870 aa12.23□□□□□ -0.45
CHMP2A-202ENST00000596708 RBAK-RBAKDNI3L0D1 243 aa12.23□□□□□ -0.45
CHMP2A-202ENST00000596708 LGR5O75473 907 aa12.23□□□□□ -0.45
CHMP2A-202ENST00000596708 RSPH10BP0C881 870 aa12.23□□□□□ -0.45
CHMP2A-202ENST00000596708 UBA1P22314 1058 aaKnown RBP12.23□□□□□ -0.45
CHMP2A-202ENST00000596708 HIC1Q14526 733 aa12.23□□□□□ -0.45
CHMP2A-202ENST00000596708 WTAPQ15007 396 aa12.23□□□□□ -0.45
CHMP2A-202ENST00000596708 TRIM71Q2Q1W2 868 aaKnown RBP12.23□□□□□ -0.45
CHMP2A-202ENST00000596708 RALYLQ86SE5 291 aaKnown RBP12.23□□□□□ -0.45
CHMP2A-202ENST00000596708 DBF4BQ8NFT6 615 aa12.23□□□□□ -0.45
CHMP2A-202ENST00000596708 RUFY2Q8WXA3 655 aa12.23□□□□□ -0.45
CHMP2A-202ENST00000596708 PIBF1Q8WXW3 757 aa12.23□□□□□ -0.45
CHMP2A-202ENST00000596708 GPKOWQ92917 476 aaPredicted RBP eCLIP12.23□□□□□ -0.45
CHMP2A-202ENST00000596708 ATP6V0A1Q93050 837 aa12.23□□□□□ -0.45
CHMP2A-202ENST00000596708 C1QTNF1Q9BXJ1 281 aa12.23□□□□□ -0.45
CHMP2A-202ENST00000596708 RIOX1Q9H6W3 641 aa12.23□□□□□ -0.45
CHMP2A-202ENST00000596708 LMCD1Q9NZU5 365 aa12.23□□□□□ -0.45
CHMP2A-202ENST00000596708 U3KPZ7 1027 aaPredicted RBP12.23□□□□□ -0.45
CHMP2A-202ENST00000596708 MUC3AQ02505 3323 aa12.22□□□□□ -0.45
CHMP2A-202ENST00000596708 EMSYQ7Z589 1322 aa12.22□□□□□ -0.45
CHMP2A-202ENST00000596708 PNMA6FA0A0J9YX94 578 aa12.22□□□□□ -0.45
CHMP2A-202ENST00000596708 LINC01553A4QN01 128 aa12.22□□□□□ -0.45
CHMP2A-202ENST00000596708 H3BRB1 525 aa12.22□□□□□ -0.45
CHMP2A-202ENST00000596708 NOP56O00567 594 aaKnown RBP12.22□□□□□ -0.45
CHMP2A-202ENST00000596708 AMHP03971 560 aa12.22□□□□□ -0.45
CHMP2A-202ENST00000596708 CYP21A2P08686 494 aa12.22□□□□□ -0.45
CHMP2A-202ENST00000596708 HOXD8P13378 290 aaPredicted RBP12.22□□□□□ -0.45
CHMP2A-202ENST00000596708 ERVK-21P61565 698 aa12.22□□□□□ -0.45
CHMP2A-202ENST00000596708 MBTPS1Q14703 1052 aa12.22□□□□□ -0.45
CHMP2A-202ENST00000596708 SART3Q15020 963 aaKnown RBP12.22□□□□□ -0.45
CHMP2A-202ENST00000596708 GNPTABQ3T906 1256 aa12.22□□□□□ -0.45
CHMP2A-202ENST00000596708 TTC22Q5TAA0 569 aa12.22□□□□□ -0.45
CHMP2A-202ENST00000596708 TRAF7Q6Q0C0 670 aa12.22□□□□□ -0.45
CHMP2A-202ENST00000596708 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.22□□□□□ -0.457e-9■■■■□ 26.5
CHMP2A-202ENST00000596708 MYOCDQ8IZQ8 938 aa12.22□□□□□ -0.45
CHMP2A-202ENST00000596708 NCOA7Q8NI08 942 aa12.22□□□□□ -0.45
CHMP2A-202ENST00000596708 C16orf70Q9BSU1 422 aa12.22□□□□□ -0.45
CHMP2A-202ENST00000596708 RNPEPQ9H4A4 650 aa12.22□□□□□ -0.45
CHMP2A-202ENST00000596708 TUT1Q9H6E5 874 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms