RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 LRRD1A4D1F6 860 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 B4DLN1 442 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 ADAMTS4O75173 837 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 PPP1R37O75864 691 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 ABL1P00519 1130 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 LMNAP02545 664 aaKnown RBP4.82□□□□□ -1.64
LRIT3-202ENST00000594814 HARSP12081 509 aaKnown RBP4.82□□□□□ -1.64
LRIT3-202ENST00000594814 RAC1P63000 192 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 AMPD2Q01433 879 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 SLC7A5Q01650 507 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 CYP4A11Q02928 519 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 PSMD2Q13200 908 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 GCKRQ14397 625 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 FXNQ16595 210 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 BZW1Q7L1Q6 419 aaKnown RBP4.82□□□□□ -1.64
LRIT3-202ENST00000594814 CAGE1Q8TC20 777 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 SMCR8Q8TEV9 937 aaPredicted RBP4.82□□□□□ -1.64
LRIT3-202ENST00000594814 ZNF594Q96JF6 807 aaPredicted RBP4.82□□□□□ -1.64
LRIT3-202ENST00000594814 PGBD1Q96JS3 809 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 MAP3K14Q99558 947 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 DMAP1Q9NPF5 467 aaPredicted RBP4.82□□□□□ -1.64
LRIT3-202ENST00000594814 PAPOLBQ9NRJ5 636 aaKnown RBP4.82□□□□□ -1.64
LRIT3-202ENST00000594814 IL1RAPL1Q9NZN1 696 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 ZFATQ9P243 1243 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 LARSQ9P2J5 1176 aaKnown RBP4.82□□□□□ -1.64
LRIT3-202ENST00000594814 GPR75-ASB3A0A0A6YYF3 556 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 VPS37CA5D8V6 355 aaPredicted RBP4.82□□□□□ -1.64
LRIT3-202ENST00000594814 BTBD19C9JJ37 291 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 AKR1B15C9JRZ8 316 aaPredicted RBP4.82□□□□□ -1.64
LRIT3-202ENST00000594814 WDR46O15213 610 aaKnown RBP4.82□□□□□ -1.64
LRIT3-202ENST00000594814 CEP104O60308 925 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 DESP17661 470 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 CMA1P23946 247 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 CCT6AP40227 531 aaKnown RBP4.82□□□□□ -1.64
LRIT3-202ENST00000594814 ZNF268Q14587 947 aaPredicted RBP4.82□□□□□ -1.64
LRIT3-202ENST00000594814 ARID5BQ14865 1188 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 NCAPHQ15003 741 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 ADRM1Q16186 407 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 ZNF827Q17R98 1081 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 KBTBD12Q3ZCT8 623 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 CCDC152Q4G0S7 254 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 ZNF394Q53GI3 561 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 CFAP58Q5T655 872 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 AGBL2Q5U5Z8 902 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 PPP2R2DQ66LE6 453 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 FOXR1Q6PIV2 292 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 GIGYF2Q6Y7W6 1299 aaKnown RBP4.82□□□□□ -1.64
LRIT3-202ENST00000594814 CCNI2Q6ZMN8 369 aaPredicted RBP4.82□□□□□ -1.64
LRIT3-202ENST00000594814 ARHGAP27Q6ZUM4 889 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 TRAPPC11Q7Z392 1133 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 PPP1R42Q7Z4L9 355 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 RSPH3Q86UC2 560 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 CCDC65Q8IXS2 484 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 CKAP2LQ8IYA6 745 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 ANKS4BQ8N8V4 417 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 STKLD1Q8NE28 680 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 RASSF8Q8NHQ8 419 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 WHAMMQ8TF30 809 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 GMCL1Q96IK5 515 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 IFT74Q96LB3 600 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 TLR7Q9NYK1 1049 aaKnown RBP4.82□□□□□ -1.64
LRIT3-202ENST00000594814 PALD1Q9ULE6 856 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 ASB3Q9Y575 518 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 NDUFB9Q9Y6M9 179 aa4.82□□□□□ -1.64
LRIT3-202ENST00000594814 hCG_2014768A0A024R1R8 64 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 MCF2LO15068 1137 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 EIF2S1P05198 315 aaKnown RBP4.81□□□□□ -1.64
LRIT3-202ENST00000594814 SLC3A2P08195 630 aaKnown RBP4.81□□□□□ -1.64
LRIT3-202ENST00000594814 HOXB7P09629 217 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 NCAM1P13591 858 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 RAC2P15153 192 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 SMARCA1P28370 1054 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 RFX5P48382 616 aaPredicted RBP4.81□□□□□ -1.64
LRIT3-202ENST00000594814 VSNL1P62760 191 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 SPAG1Q07617 926 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 COL9A3Q14050 684 aaPredicted RBP4.81□□□□□ -1.64
LRIT3-202ENST00000594814 GALEQ14376 348 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 PTGISQ16647 500 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 ANKRD20A8PQ5CZ79 823 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 NAA35Q5VZE5 725 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 TTC19Q6DKK2 380 aaPredicted RBP4.81□□□□□ -1.64
LRIT3-202ENST00000594814 RUFY4Q6ZNE9 571 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 FAM114A1Q8IWE2 563 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 CHPFQ8IZ52 775 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 ZNF473Q8WTR7 871 aaKnown RBP4.81□□□□□ -1.64
LRIT3-202ENST00000594814 NUP133Q8WUM0 1156 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 SLC35B4Q969S0 331 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 FAM212AQ96EL1 285 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 RBM41Q96IZ5 413 aaKnown RBP4.81□□□□□ -1.64
LRIT3-202ENST00000594814 CHAMP1Q96JM3 812 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 METTL22Q9BUU2 404 aaPredicted RBP4.81□□□□□ -1.64
LRIT3-202ENST00000594814 PUS3Q9BZE2 481 aaKnown RBP4.81□□□□□ -1.64
LRIT3-202ENST00000594814 RABEP2Q9H5N1 569 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.81□□□□□ -1.64
LRIT3-202ENST00000594814 NDUFA13Q9P0J0 144 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 ATXN10Q9UBB4 475 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 PHF24Q9UPV7 400 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 SSX2IPQ9Y2D8 614 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 LRRIQ3A6PVS8 624 aaPredicted RBP4.81□□□□□ -1.64
LRIT3-202ENST00000594814 TBX3O15119 743 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 213.3 ms