RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 NAPAP54920 295 aa21.24■□□□□ 0.99
SHKBP1-202ENST00000593764 SHHQ15465 462 aa21.24■□□□□ 0.99
SHKBP1-202ENST00000593764 NTRK3Q16288 839 aa21.24■□□□□ 0.99
SHKBP1-202ENST00000593764 DGKDQ16760 1214 aa21.24■□□□□ 0.99
SHKBP1-202ENST00000593764 HSDL1Q3SXM5 330 aa21.24■□□□□ 0.99
SHKBP1-202ENST00000593764 NFRKBQ6P4R8 1299 aa21.24■□□□□ 0.99
SHKBP1-202ENST00000593764 RIC8AQ9NPQ8 531 aa21.24■□□□□ 0.99
SHKBP1-202ENST00000593764 hCG_1984214I3L0E3 225 aa21.23■□□□□ 0.99
SHKBP1-202ENST00000593764 SORBS3O60504 671 aa21.23■□□□□ 0.99
SHKBP1-202ENST00000593764 GGPS1O95749 300 aa21.23■□□□□ 0.99
SHKBP1-202ENST00000593764 PKN1Q16512 942 aa21.23■□□□□ 0.99
SHKBP1-202ENST00000593764 PFKFB3Q16875 520 aaPredicted RBP21.23■□□□□ 0.99
SHKBP1-202ENST00000593764 MFSD5Q6N075 450 aa21.23■□□□□ 0.99
SHKBP1-202ENST00000593764 PPP1R18Q6NYC8 613 aa21.23■□□□□ 0.99
SHKBP1-202ENST00000593764 ZNF713Q8N859 430 aaPredicted RBP21.23■□□□□ 0.99
SHKBP1-202ENST00000593764 TRMT13Q9NUP7 481 aaKnown RBP21.23■□□□□ 0.99
SHKBP1-202ENST00000593764 PCDHA6Q9UN73 950 aa21.23■□□□□ 0.99
SHKBP1-202ENST00000593764 PCDHA8Q9Y5H6 950 aa21.23■□□□□ 0.99
SHKBP1-202ENST00000593764 PRPF3O43395 683 aaKnown RBP21.22■□□□□ 0.99
SHKBP1-202ENST00000593764 CYP2C18P33260 490 aa21.22■□□□□ 0.99
SHKBP1-202ENST00000593764 CCT2P78371 535 aaKnown RBP21.22■□□□□ 0.99
SHKBP1-202ENST00000593764 FPGSQ05932 587 aa21.22■□□□□ 0.99
SHKBP1-202ENST00000593764 GNPTABQ3T906 1256 aa21.22■□□□□ 0.99
SHKBP1-202ENST00000593764 SPATA33Q96N06 139 aa21.22■□□□□ 0.99
SHKBP1-202ENST00000593764 LARP6Q9BRS8 491 aaKnown RBP21.22■□□□□ 0.99
SHKBP1-202ENST00000593764 NOC4LQ9BVI4 516 aaKnown RBP21.22■□□□□ 0.99
SHKBP1-202ENST00000593764 PPP1R12CQ9BZL4 782 aa21.22■□□□□ 0.99
SHKBP1-202ENST00000593764 NCOA5Q9HCD5 579 aaKnown RBP21.22■□□□□ 0.99
SHKBP1-202ENST00000593764 SMCO2A6NFE2 343 aa21.21■□□□□ 0.99
SHKBP1-202ENST00000593764 SPDYE3A6NKU9 549 aa21.21■□□□□ 0.99
SHKBP1-202ENST00000593764 FIBPO43427 364 aa21.21■□□□□ 0.99
SHKBP1-202ENST00000593764 PPFIA4O75335 1185 aa21.21■□□□□ 0.99
SHKBP1-202ENST00000593764 SCG2P13521 617 aa21.21■□□□□ 0.99
SHKBP1-202ENST00000593764 TEX2Q8IWB9 1127 aa21.21■□□□□ 0.99
SHKBP1-202ENST00000593764 PHKBQ93100 1093 aa21.21■□□□□ 0.99
SHKBP1-202ENST00000593764 HIPK3Q9H422 1215 aa21.21■□□□□ 0.99
SHKBP1-202ENST00000593764 UMODL1Q5DID0 1318 aa21.21■□□□□ 0.99
SHKBP1-202ENST00000593764 PPFIA3O75145 1194 aa21.2■□□□□ 0.98
SHKBP1-202ENST00000593764 SEC24BO95487 1268 aa21.2■□□□□ 0.98
SHKBP1-202ENST00000593764 IFNAR1P17181 557 aa21.2■□□□□ 0.98
SHKBP1-202ENST00000593764 ITGB5P18084 799 aa21.2■□□□□ 0.98
SHKBP1-202ENST00000593764 CLK2P49760 499 aaKnown RBP21.2■□□□□ 0.98
SHKBP1-202ENST00000593764 ADCY7P51828 1080 aa21.2■□□□□ 0.98
SHKBP1-202ENST00000593764 PTPN11Q06124 597 aaPredicted RBP21.2■□□□□ 0.98
SHKBP1-202ENST00000593764 FAM47CQ5HY64 1035 aa21.2■□□□□ 0.98
SHKBP1-202ENST00000593764 C16orf59Q7L2K0 433 aa21.2■□□□□ 0.98
SHKBP1-202ENST00000593764 ZNF274Q96GC6 653 aaPredicted RBP21.2■□□□□ 0.98
SHKBP1-202ENST00000593764 SENP7Q9BQF6 1050 aa21.2■□□□□ 0.98
SHKBP1-202ENST00000593764 MLXIPQ9HAP2 919 aa21.2■□□□□ 0.98
SHKBP1-202ENST00000593764 PDRG1Q9NUG6 133 aa21.2■□□□□ 0.98
SHKBP1-202ENST00000593764 UBIAD1Q9Y5Z9 338 aa21.2■□□□□ 0.98
SHKBP1-202ENST00000593764 HAS3O00219 553 aa21.19■□□□□ 0.98
SHKBP1-202ENST00000593764 ADAMTS3O15072 1205 aa21.19■□□□□ 0.98
SHKBP1-202ENST00000593764 F2P00734 622 aa21.19■□□□□ 0.98
SHKBP1-202ENST00000593764 SUPT20HL2P0C7V6 817 aa21.19■□□□□ 0.98
SHKBP1-202ENST00000593764 ZNF286BP0CG31 522 aa21.19■□□□□ 0.98
SHKBP1-202ENST00000593764 CYP2C9P11712 490 aa21.19■□□□□ 0.98
SHKBP1-202ENST00000593764 CSF2RAP15509 400 aa21.19■□□□□ 0.98
SHKBP1-202ENST00000593764 ANAPC15P60006 121 aa21.19■□□□□ 0.98
SHKBP1-202ENST00000593764 NEDD9Q14511 834 aa21.19■□□□□ 0.98
SHKBP1-202ENST00000593764 CYFIP1Q7L576 1253 aa21.19■□□□□ 0.98
SHKBP1-202ENST00000593764 NLRX1Q86UT6 975 aa21.19■□□□□ 0.98
SHKBP1-202ENST00000593764 SESTD1Q86VW0 696 aa21.19■□□□□ 0.98
SHKBP1-202ENST00000593764 IL17RAQ96F46 866 aa21.19■□□□□ 0.98
SHKBP1-202ENST00000593764 CTAGE1Q96RT6 745 aa21.19■□□□□ 0.98
SHKBP1-202ENST00000593764 TELO2Q9Y4R8 837 aa21.19■□□□□ 0.98
SHKBP1-202ENST00000593764 ATP9AO75110 1047 aa21.18■□□□□ 0.98
SHKBP1-202ENST00000593764 FOSP01100 380 aaPredicted RBP21.18■□□□□ 0.98
SHKBP1-202ENST00000593764 PSEN2P49810 448 aa21.18■□□□□ 0.98
SHKBP1-202ENST00000593764 CHMP4BP1P59074 171 aa21.18■□□□□ 0.98
SHKBP1-202ENST00000593764 METTL7BQ6UX53 244 aa21.18■□□□□ 0.98
SHKBP1-202ENST00000593764 TMEM199Q8N511 208 aa21.18■□□□□ 0.98
SHKBP1-202ENST00000593764 GPRASP2Q96D09 838 aa21.18■□□□□ 0.98
SHKBP1-202ENST00000593764 PGBD1Q96JS3 809 aa21.18■□□□□ 0.98
SHKBP1-202ENST00000593764 C16orf70Q9BSU1 422 aa21.18■□□□□ 0.98
SHKBP1-202ENST00000593764 RNF26Q9BY78 433 aaPredicted RBP21.18■□□□□ 0.98
SHKBP1-202ENST00000593764 ZMYND12Q9H0C1 365 aa21.18■□□□□ 0.98
SHKBP1-202ENST00000593764 WNT8AQ9H1J5 351 aa21.18■□□□□ 0.98
SHKBP1-202ENST00000593764 TMEM260Q9NX78 707 aa21.18■□□□□ 0.98
SHKBP1-202ENST00000593764 ESYT2A0FGR8 921 aa21.17■□□□□ 0.98
SHKBP1-202ENST00000593764 CCL23P55773 120 aa21.17■□□□□ 0.98
SHKBP1-202ENST00000593764 PPIGQ13427 754 aaKnown RBP eCLIP21.17■□□□□ 0.98
SHKBP1-202ENST00000593764 MFSD10Q14728 455 aa21.17■□□□□ 0.98
SHKBP1-202ENST00000593764 KIAA0753Q2KHM9 967 aa21.17■□□□□ 0.98
SHKBP1-202ENST00000593764 GDF6Q6KF10 455 aaPredicted RBP21.17■□□□□ 0.98
SHKBP1-202ENST00000593764 VWCEQ96DN2 955 aa21.17■□□□□ 0.98
SHKBP1-202ENST00000593764 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.17■□□□□ 0.98
SHKBP1-202ENST00000593764 SLC26A6Q9BXS9 759 aa21.17■□□□□ 0.98
SHKBP1-202ENST00000593764 GLT8D2Q9H1C3 349 aa21.17■□□□□ 0.98
SHKBP1-202ENST00000593764 JADE2Q9NQC1 790 aa21.17■□□□□ 0.98
SHKBP1-202ENST00000593764 KCNA2P16389 499 aa21.16■□□□□ 0.98
SHKBP1-202ENST00000593764 TMEM240Q5SV17 173 aa21.16■□□□□ 0.98
SHKBP1-202ENST00000593764 GPR153Q6NV75 609 aa21.16■□□□□ 0.98
SHKBP1-202ENST00000593764 CYP2W1Q8TAV3 490 aa21.16■□□□□ 0.98
SHKBP1-202ENST00000593764 GPR20Q99678 358 aa21.16■□□□□ 0.98
SHKBP1-202ENST00000593764 ALG1Q9BT22 464 aa21.16■□□□□ 0.98
SHKBP1-202ENST00000593764 KATNAL1Q9BW62 490 aa21.16■□□□□ 0.98
SHKBP1-202ENST00000593764 ANO3Q9BYT9 981 aa21.16■□□□□ 0.98
SHKBP1-202ENST00000593764 EHMT1Q9H9B1 1298 aa21.16■□□□□ 0.98
SHKBP1-202ENST00000593764 HDAC6Q9UBN7 1215 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms