RNA–Protein interactions for RNA: ENST00000591304.1

CLPTM1-212, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-212ENST00000591304 NEDD9Q14511 834 aa26.72■■□□□ 1.87
CLPTM1-212ENST00000591304 FAM47CQ5HY64 1035 aa26.72■■□□□ 1.87
CLPTM1-212ENST00000591304 WWC2Q6AWC2 1192 aa26.72■■□□□ 1.87
CLPTM1-212ENST00000591304 NLRX1Q86UT6 975 aa26.72■■□□□ 1.87
CLPTM1-212ENST00000591304 MLXIPQ9HAP2 919 aa26.72■■□□□ 1.87
CLPTM1-212ENST00000591304 SPATA31C2B4DYI2 1134 aa26.71■■□□□ 1.87
CLPTM1-212ENST00000591304 UBA1P22314 1058 aaKnown RBP26.71■■□□□ 1.87
CLPTM1-212ENST00000591304 ADD1P35611 737 aaKnown RBP26.71■■□□□ 1.87
CLPTM1-212ENST00000591304 CDHR1Q96JP9 859 aa26.71■■□□□ 1.87
CLPTM1-212ENST00000591304 SPATA33Q96N06 139 aa26.71■■□□□ 1.87
CLPTM1-212ENST00000591304 PPP1R12CQ9BZL4 782 aa26.71■■□□□ 1.87
CLPTM1-212ENST00000591304 RIC8AQ9NPQ8 531 aa26.71■■□□□ 1.87
CLPTM1-212ENST00000591304 BARHL2Q9NY43 387 aa26.71■■□□□ 1.87
CLPTM1-212ENST00000591304 FOSP01100 380 aaPredicted RBP26.7■■□□□ 1.86
CLPTM1-212ENST00000591304 HOXD8P13378 290 aaPredicted RBP26.7■■□□□ 1.86
CLPTM1-212ENST00000591304 SESTD1Q86VW0 696 aa26.7■■□□□ 1.86
CLPTM1-212ENST00000591304 GIMAP8Q8ND71 665 aaPredicted RBP26.7■■□□□ 1.86
CLPTM1-212ENST00000591304 LRCH3Q96II8 777 aa26.7■■□□□ 1.86
CLPTM1-212ENST00000591304 RTEL1Q9NZ71 1219 aa26.7■■□□□ 1.86
CLPTM1-212ENST00000591304 LAMA3Q16787 3333 aa26.69■■□□□ 1.86
CLPTM1-212ENST00000591304 SP2Q02086 613 aa26.69■■□□□ 1.86
CLPTM1-212ENST00000591304 PFKFB3Q16875 520 aaPredicted RBP26.69■■□□□ 1.86
CLPTM1-212ENST00000591304 C9orf50Q5SZB4 431 aa26.69■■□□□ 1.86
CLPTM1-212ENST00000591304 CCDC12Q8WUD4 166 aaPredicted RBP26.69■■□□□ 1.86
CLPTM1-212ENST00000591304 SENP7Q9BQF6 1050 aa26.69■■□□□ 1.86
CLPTM1-212ENST00000591304 NOC4LQ9BVI4 516 aaKnown RBP26.69■■□□□ 1.86
CLPTM1-212ENST00000591304 TRMT13Q9NUP7 481 aaKnown RBP26.69■■□□□ 1.86
CLPTM1-212ENST00000591304 PCDHA6Q9UN73 950 aa26.69■■□□□ 1.86
CLPTM1-212ENST00000591304 PCDHA8Q9Y5H6 950 aa26.69■■□□□ 1.86
CLPTM1-212ENST00000591304 STXBP3O00186 592 aa26.68■■□□□ 1.86
CLPTM1-212ENST00000591304 ADCY7P51828 1080 aa26.68■■□□□ 1.86
CLPTM1-212ENST00000591304 AKAP17AQ02040 695 aaKnown RBP26.68■■□□□ 1.86
CLPTM1-212ENST00000591304 UBE2SQ16763 222 aa26.68■■□□□ 1.86
CLPTM1-212ENST00000591304 METTL7BQ6UX53 244 aa26.68■■□□□ 1.86
CLPTM1-212ENST00000591304 GPRASP2Q96D09 838 aa26.68■■□□□ 1.86
CLPTM1-212ENST00000591304 ZFP91Q96JP5 570 aaPredicted RBP26.68■■□□□ 1.86
CLPTM1-212ENST00000591304 SMCO2A6NFE2 343 aa26.67■■□□□ 1.86
CLPTM1-212ENST00000591304 NOP56O00567 594 aaKnown RBP26.67■■□□□ 1.86
CLPTM1-212ENST00000591304 MAFGO15525 162 aa26.67■■□□□ 1.86
CLPTM1-212ENST00000591304 PRPF3O43395 683 aaKnown RBP26.67■■□□□ 1.86
CLPTM1-212ENST00000591304 F2P00734 622 aa26.67■■□□□ 1.86
CLPTM1-212ENST00000591304 SCG2P13521 617 aa26.67■■□□□ 1.86
CLPTM1-212ENST00000591304 PDIA3P30101 505 aaKnown RBP26.67■■□□□ 1.86
CLPTM1-212ENST00000591304 CYP2C18P33260 490 aa26.67■■□□□ 1.86
CLPTM1-212ENST00000591304 HSDL1Q3SXM5 330 aa26.67■■□□□ 1.86
CLPTM1-212ENST00000591304 KAT2BQ92831 832 aa26.67■■□□□ 1.86
CLPTM1-212ENST00000591304 RNPC3Q96LT9 517 aaKnown RBP26.67■■□□□ 1.86
CLPTM1-212ENST00000591304 NOD1Q9Y239 953 aa26.67■■□□□ 1.86
CLPTM1-212ENST00000591304 CSF2RAP15509 400 aa26.66■■□□□ 1.86
CLPTM1-212ENST00000591304 PSEN2P49810 448 aa26.66■■□□□ 1.86
CLPTM1-212ENST00000591304 EPHB4P54760 987 aa26.66■■□□□ 1.86
CLPTM1-212ENST00000591304 CHMP4BP1P59074 171 aa26.66■■□□□ 1.86
CLPTM1-212ENST00000591304 ANAPC15P60006 121 aa26.66■■□□□ 1.86
CLPTM1-212ENST00000591304 AP3B2Q13367 1082 aa26.66■■□□□ 1.86
CLPTM1-212ENST00000591304 MCTP2Q6DN12 878 aa26.66■■□□□ 1.86
CLPTM1-212ENST00000591304 PSRC1Q6PGN9 363 aaPredicted RBP26.66■■□□□ 1.86
CLPTM1-212ENST00000591304 RPUSD2Q8IZ73 545 aaKnown RBP26.66■■□□□ 1.86
CLPTM1-212ENST00000591304 C7orf31Q8N865 590 aa26.66■■□□□ 1.86
CLPTM1-212ENST00000591304 ZNF274Q96GC6 653 aaPredicted RBP26.66■■□□□ 1.86
CLPTM1-212ENST00000591304 RNF26Q9BY78 433 aaPredicted RBP26.66■■□□□ 1.86
CLPTM1-212ENST00000591304 BFSP2Q13515 415 aa26.65■■□□□ 1.86
CLPTM1-212ENST00000591304 MFSD10Q14728 455 aa26.65■■□□□ 1.86
CLPTM1-212ENST00000591304 TYW1BQ6NUM6 668 aa26.65■■□□□ 1.86
CLPTM1-212ENST00000591304 CCDC155Q8N6L0 562 aa26.65■■□□□ 1.86
CLPTM1-212ENST00000591304 IL23AQ9NPF7 189 aa26.65■■□□□ 1.86
CLPTM1-212ENST00000591304 ESYT2A0FGR8 921 aa26.64■■□□□ 1.86
CLPTM1-212ENST00000591304 HAS3O00219 553 aa26.64■■□□□ 1.86
CLPTM1-212ENST00000591304 PITPNM1O00562 1244 aa26.64■■□□□ 1.86
CLPTM1-212ENST00000591304 IFNAR1P17181 557 aa26.64■■□□□ 1.86
CLPTM1-212ENST00000591304 TOB2Q14106 344 aaPredicted RBP26.64■■□□□ 1.86
CLPTM1-212ENST00000591304 PTGISQ16647 500 aa26.64■■□□□ 1.86
CLPTM1-212ENST00000591304 KIAA0753Q2KHM9 967 aa26.64■■□□□ 1.86
CLPTM1-212ENST00000591304 CYFIP1Q7L576 1253 aa26.64■■□□□ 1.86
CLPTM1-212ENST00000591304 UBIAD1Q9Y5Z9 338 aa26.64■■□□□ 1.86
CLPTM1-212ENST00000591304 SZT2Q5T011 3432 aa26.64■■□□□ 1.85
CLPTM1-212ENST00000591304 CYP2C9P11712 490 aa26.63■■□□□ 1.85
CLPTM1-212ENST00000591304 SMAD3P84022 425 aaKnown RBP26.63■■□□□ 1.85
CLPTM1-212ENST00000591304 SEMA3FQ13275 785 aa26.63■■□□□ 1.85
CLPTM1-212ENST00000591304 MTMR1Q13613 665 aa26.63■■□□□ 1.85
CLPTM1-212ENST00000591304 NTRK3Q16288 839 aa26.63■■□□□ 1.85
CLPTM1-212ENST00000591304 FAM109BQ6ICB4 259 aaPredicted RBP26.63■■□□□ 1.85
CLPTM1-212ENST00000591304 RETREG2Q8NC44 543 aa26.63■■□□□ 1.85
CLPTM1-212ENST00000591304 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.63■■□□□ 1.852e-9■□□□□ 8.2
CLPTM1-212ENST00000591304 UPF3BQ9BZI7 483 aaKnown RBP26.63■■□□□ 1.85
CLPTM1-212ENST00000591304 MTIF3Q9H2K0 278 aaKnown RBP26.63■■□□□ 1.85
CLPTM1-212ENST00000591304 C6orf50Q9HD87 102 aa26.63■■□□□ 1.85
CLPTM1-212ENST00000591304 JADE2Q9NQC1 790 aa26.63■■□□□ 1.85
CLPTM1-212ENST00000591304 PDRG1Q9NUG6 133 aa26.63■■□□□ 1.85
CLPTM1-212ENST00000591304 GTF2IRD1Q9UHL9 959 aa26.63■■□□□ 1.85
CLPTM1-212ENST00000591304 DOCK5Q9H7D0 1870 aa26.63■■□□□ 1.85
CLPTM1-212ENST00000591304 SORBS3O60504 671 aa26.62■■□□□ 1.85
CLPTM1-212ENST00000591304 PFKMP08237 780 aa26.62■■□□□ 1.85
CLPTM1-212ENST00000591304 ZNF286BP0CG31 522 aa26.62■■□□□ 1.85
CLPTM1-212ENST00000591304 ITGB5P18084 799 aa26.62■■□□□ 1.85
CLPTM1-212ENST00000591304 GNA11P29992 359 aa26.62■■□□□ 1.85
CLPTM1-212ENST00000591304 CCL23P55773 120 aa26.62■■□□□ 1.85
CLPTM1-212ENST00000591304 TMEM240Q5SV17 173 aa26.62■■□□□ 1.85
CLPTM1-212ENST00000591304 TRIM22Q8IYM9 498 aa26.62■■□□□ 1.85
CLPTM1-212ENST00000591304 CAGE1Q8TC20 777 aa26.62■■□□□ 1.85
CLPTM1-212ENST00000591304 ZMYND12Q9H0C1 365 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms