RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 TIGD5Q53EQ6 642 aa20.27■□□□□ 0.84
RETREG3-210ENST00000590541 TCEAL5Q5H9L2 206 aa20.27■□□□□ 0.84
RETREG3-210ENST00000590541 GPATCH4Q5T3I0 446 aaKnown RBP20.27■□□□□ 0.84
RETREG3-210ENST00000590541 BANK1Q8NDB2 785 aa20.27■□□□□ 0.84
RETREG3-210ENST00000590541 SAMD11Q96NU1 681 aa20.27■□□□□ 0.84
RETREG3-210ENST00000590541 RMDN3Q96TC7 470 aa20.27■□□□□ 0.84
RETREG3-210ENST00000590541 MICAL3Q7RTP6 2002 aa20.27■□□□□ 0.84
RETREG3-210ENST00000590541 ABCB11O95342 1321 aa20.27■□□□□ 0.83
RETREG3-210ENST00000590541 EMSYQ7Z589 1322 aa20.27■□□□□ 0.83
RETREG3-210ENST00000590541 C19orf67A6NJJ6 358 aa20.26■□□□□ 0.83
RETREG3-210ENST00000590541 HOXD8P13378 290 aaPredicted RBP20.26■□□□□ 0.83
RETREG3-210ENST00000590541 LAMC2Q13753 1193 aa20.26■□□□□ 0.83
RETREG3-210ENST00000590541 PLEKHG4Q58EX7 1191 aa20.26■□□□□ 0.83
RETREG3-210ENST00000590541 HELLSQ9NRZ9 838 aa20.26■□□□□ 0.83
RETREG3-210ENST00000590541 RSPH10B2B2RC85 870 aa20.25■□□□□ 0.83
RETREG3-210ENST00000590541 EIF3JO75822 258 aaKnown RBP20.25■□□□□ 0.83
RETREG3-210ENST00000590541 RSPH10BP0C881 870 aa20.25■□□□□ 0.83
RETREG3-210ENST00000590541 EIF2AK2P19525 551 aaKnown RBP20.25■□□□□ 0.83
RETREG3-210ENST00000590541 HAND2P61296 217 aa20.25■□□□□ 0.83
RETREG3-210ENST00000590541 GPM6BQ13491 265 aa20.25■□□□□ 0.83
RETREG3-210ENST00000590541 SERINC5Q86VE9 423 aa20.25■□□□□ 0.83
RETREG3-210ENST00000590541 DHX37Q8IY37 1157 aaKnown RBP20.25■□□□□ 0.83
RETREG3-210ENST00000590541 PRKAG3Q9UGI9 489 aa20.25■□□□□ 0.83
RETREG3-210ENST00000590541 MRVI1Q9Y6F6 885 aa20.25■□□□□ 0.83
RETREG3-210ENST00000590541 NR3C2P08235 984 aa20.24■□□□□ 0.83
RETREG3-210ENST00000590541 THPOP40225 353 aa20.24■□□□□ 0.83
RETREG3-210ENST00000590541 ARHGEF16Q5VV41 709 aa20.24■□□□□ 0.83
RETREG3-210ENST00000590541 MCF2L2Q86YR7 1114 aa20.24■□□□□ 0.83
RETREG3-210ENST00000590541 ANKS1AQ92625 1134 aa20.24■□□□□ 0.83
RETREG3-210ENST00000590541 TOP1MTQ969P6 601 aa20.24■□□□□ 0.83
RETREG3-210ENST00000590541 EVI5LQ96CN4 794 aa20.24■□□□□ 0.83
RETREG3-210ENST00000590541 FAM227BQ96M60 508 aa20.24■□□□□ 0.83
RETREG3-210ENST00000590541 OSBPL7Q9BZF2 842 aa20.24■□□□□ 0.83
RETREG3-210ENST00000590541 NSUN3Q9H649 340 aaKnown RBP20.24■□□□□ 0.83
RETREG3-210ENST00000590541 ZMYM6O95789 1325 aa20.24■□□□□ 0.83
RETREG3-210ENST00000590541 COL4A6Q14031 1691 aa20.23■□□□□ 0.83
RETREG3-210ENST00000590541 A0A0D9SFI3 127 aa20.23■□□□□ 0.83
RETREG3-210ENST00000590541 RGS20O76081 388 aa20.23■□□□□ 0.83
RETREG3-210ENST00000590541 HSPD1P10809 573 aaKnown RBP20.23■□□□□ 0.83
RETREG3-210ENST00000590541 PDE1AP54750 535 aa20.23■□□□□ 0.83
RETREG3-210ENST00000590541 HSDL1Q3SXM5 330 aa20.23■□□□□ 0.83
RETREG3-210ENST00000590541 MYSM1Q5VVJ2 828 aa20.23■□□□□ 0.83
RETREG3-210ENST00000590541 EP400NLQ6ZTU2 488 aa20.23■□□□□ 0.83
RETREG3-210ENST00000590541 HFE2Q6ZVN8 426 aa20.23■□□□□ 0.83
RETREG3-210ENST00000590541 FBXO11Q86XK2 927 aa20.23■□□□□ 0.83
RETREG3-210ENST00000590541 ADHFE1Q8IWW8 467 aa20.23■□□□□ 0.83
RETREG3-210ENST00000590541 SMC5Q8IY18 1101 aa20.23■□□□□ 0.83
RETREG3-210ENST00000590541 TMEM192Q8IY95 271 aa20.23■□□□□ 0.83
RETREG3-210ENST00000590541 ADGRF4Q8IZF3 695 aa20.23■□□□□ 0.83
RETREG3-210ENST00000590541 YME1L1Q96TA2 773 aa20.23■□□□□ 0.83
RETREG3-210ENST00000590541 ZKSCAN3Q9BRR0 538 aa20.23■□□□□ 0.83
RETREG3-210ENST00000590541 PXMP2Q9NR77 195 aa20.23■□□□□ 0.83
RETREG3-210ENST00000590541 FAM50BQ9Y247 325 aa20.23■□□□□ 0.83
RETREG3-210ENST00000590541 WDFY4Q6ZS81 3184 aa20.22■□□□□ 0.83
RETREG3-210ENST00000590541 MYH7BA7E2Y1 1941 aa20.22■□□□□ 0.83
RETREG3-210ENST00000590541 PPFIA4O75335 1185 aa20.22■□□□□ 0.83
RETREG3-210ENST00000590541 IRS1P35568 1242 aa20.22■□□□□ 0.83
RETREG3-210ENST00000590541 LTBRP36941 435 aa20.22■□□□□ 0.83
RETREG3-210ENST00000590541 QRICH1Q2TAL8 776 aa20.22■□□□□ 0.83
RETREG3-210ENST00000590541 MFSD6Q6ZSS7 791 aa20.22■□□□□ 0.83
RETREG3-210ENST00000590541 TBC1D10CQ8IV04 446 aa20.22■□□□□ 0.83
RETREG3-210ENST00000590541 C16orf70Q9BSU1 422 aa20.22■□□□□ 0.83
RETREG3-210ENST00000590541 CLDND1Q9NY35 253 aa20.22■□□□□ 0.83
RETREG3-210ENST00000590541 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.21■□□□□ 0.83
RETREG3-210ENST00000590541 SORBS3O60504 671 aa20.21■□□□□ 0.83
RETREG3-210ENST00000590541 UPP2O95045 317 aa20.21■□□□□ 0.83
RETREG3-210ENST00000590541 HOXC8P31273 242 aa20.21■□□□□ 0.83
RETREG3-210ENST00000590541 MCMDC2Q4G0Z9 681 aa20.21■□□□□ 0.83
RETREG3-210ENST00000590541 CELF3Q5SZQ8 465 aaKnown RBP20.21■□□□□ 0.83
RETREG3-210ENST00000590541 ZNF589Q86UQ0 364 aaPredicted RBP20.21■□□□□ 0.83
RETREG3-210ENST00000590541 DGKHQ86XP1 1220 aa20.21■□□□□ 0.83
RETREG3-210ENST00000590541 MRPL11Q9Y3B7 192 aaKnown RBP20.21■□□□□ 0.83
RETREG3-210ENST00000590541 NEDD4P46934 1319 aa20.21■□□□□ 0.83
RETREG3-210ENST00000590541 NLRC5Q86WI3 1866 aa20.2■□□□□ 0.82
RETREG3-210ENST00000590541 OPLAHO14841 1288 aa20.2■□□□□ 0.82
RETREG3-210ENST00000590541 PCP11498 1178 aaKnown RBP20.2■□□□□ 0.82
RETREG3-210ENST00000590541 RPAINQ86UA6 219 aa20.2■□□□□ 0.82
RETREG3-210ENST00000590541 PNMA1Q8ND90 353 aa20.2■□□□□ 0.82
RETREG3-210ENST00000590541 SEPT8Q92599 483 aa20.2■□□□□ 0.82
RETREG3-210ENST00000590541 ATP6V0A1Q93050 837 aa20.2■□□□□ 0.82
RETREG3-210ENST00000590541 SPATA33Q96N06 139 aa20.2■□□□□ 0.82
RETREG3-210ENST00000590541 ZNF318Q5VUA4 2279 aa20.19■□□□□ 0.82
RETREG3-210ENST00000590541 C17orf102A2RUQ5 167 aa20.19■□□□□ 0.82
RETREG3-210ENST00000590541 GGPS1O95749 300 aa20.19■□□□□ 0.82
RETREG3-210ENST00000590541 CFBP00751 764 aa20.19■□□□□ 0.82
RETREG3-210ENST00000590541 HSD17B4P51659 736 aa20.19■□□□□ 0.82
RETREG3-210ENST00000590541 SP2Q02086 613 aa20.19■□□□□ 0.82
RETREG3-210ENST00000590541 CTC1Q2NKJ3 1217 aa20.19■□□□□ 0.82
RETREG3-210ENST00000590541 ESR2Q92731 530 aa20.19■□□□□ 0.82
RETREG3-210ENST00000590541 PDCD2LQ9BRP1 358 aa20.19■□□□□ 0.82
RETREG3-210ENST00000590541 UPF3BQ9BZI7 483 aaKnown RBP20.19■□□□□ 0.82
RETREG3-210ENST00000590541 JMJD4Q9H9V9 463 aa20.19■□□□□ 0.82
RETREG3-210ENST00000590541 ATG2AQ2TAZ0 1938 aa20.19■□□□□ 0.82
RETREG3-210ENST00000590541 TREHO43280 583 aa20.18■□□□□ 0.82
RETREG3-210ENST00000590541 LINC00271P0C7V0 271 aa20.18■□□□□ 0.82
RETREG3-210ENST00000590541 GHRHRQ02643 423 aa20.18■□□□□ 0.82
RETREG3-210ENST00000590541 DLX2Q07687 328 aaPredicted RBP20.18■□□□□ 0.82
RETREG3-210ENST00000590541 SMAD2Q15796 467 aaKnown RBP20.18■□□□□ 0.82
RETREG3-210ENST00000590541 EXOC6Q8TAG9 804 aa20.18■□□□□ 0.82
RETREG3-210ENST00000590541 MUTYHQ9UIF7 546 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms