RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 DUSP11O75319 330 aaKnown RBP11.97□□□□□ -0.49
SDF2-208ENST00000589788 COL6A1P12109 1028 aa11.97□□□□□ -0.49
SDF2-208ENST00000589788 RPS6KB1P23443 525 aa11.97□□□□□ -0.49
SDF2-208ENST00000589788 TNFAIP2Q03169 654 aa11.97□□□□□ -0.49
SDF2-208ENST00000589788 Q6ZUG5 572 aa11.97□□□□□ -0.49
SDF2-208ENST00000589788 TMTC3Q6ZXV5 915 aa11.97□□□□□ -0.49
SDF2-208ENST00000589788 FBXO16Q8IX29 292 aaPredicted RBP11.97□□□□□ -0.49
SDF2-208ENST00000589788 CMTR1Q8N1G2 835 aaKnown RBP11.97□□□□□ -0.49
SDF2-208ENST00000589788 CCDC82Q8N4S0 544 aa11.97□□□□□ -0.49
SDF2-208ENST00000589788 SRBD1Q8N5C6 995 aaKnown RBP11.97□□□□□ -0.49
SDF2-208ENST00000589788 SAMD3Q8N6K7 520 aa11.97□□□□□ -0.49
SDF2-208ENST00000589788 SYTL5Q8TDW5 730 aaPredicted RBP11.97□□□□□ -0.49
SDF2-208ENST00000589788 MORC4Q8TE76 937 aa11.97□□□□□ -0.49
SDF2-208ENST00000589788 NSUN6Q8TEA1 469 aaKnown RBP11.97□□□□□ -0.49
SDF2-208ENST00000589788 KATNBL1Q9H079 304 aa11.97□□□□□ -0.49
SDF2-208ENST00000589788 BRPF3Q9ULD4 1205 aa11.97□□□□□ -0.49
SDF2-208ENST00000589788 CYP46A1Q9Y6A2 500 aa11.97□□□□□ -0.49
SDF2-208ENST00000589788 DDX49Q9Y6V7 483 aaKnown RBP11.97□□□□□ -0.49
SDF2-208ENST00000589788 LRRC37A2A6NM11 1700 aa11.97□□□□□ -0.49
SDF2-208ENST00000589788 TNRC18O15417 2968 aaPredicted RBP11.97□□□□□ -0.49
SDF2-208ENST00000589788 SYNRGQ9UMZ2 1314 aa11.96□□□□□ -0.49
SDF2-208ENST00000589788 ADCYAP1R1P41586 468 aa11.96□□□□□ -0.49
SDF2-208ENST00000589788 HSD17B4P51659 736 aa11.96□□□□□ -0.49
SDF2-208ENST00000589788 APOBRQ0VD83 1088 aa11.96□□□□□ -0.49
SDF2-208ENST00000589788 C8orf34Q49A92 452 aa11.96□□□□□ -0.49
SDF2-208ENST00000589788 ARHGEF16Q5VV41 709 aa11.96□□□□□ -0.49
SDF2-208ENST00000589788 IQSEC1Q6DN90 963 aa11.96□□□□□ -0.49
SDF2-208ENST00000589788 BRF1Q92994 677 aa11.96□□□□□ -0.49
SDF2-208ENST00000589788 TAAR1Q96RJ0 339 aa11.96□□□□□ -0.49
SDF2-208ENST00000589788 RMDN3Q96TC7 470 aa11.96□□□□□ -0.49
SDF2-208ENST00000589788 AP5M1Q9H0R1 490 aa11.96□□□□□ -0.49
SDF2-208ENST00000589788 MAP3K20Q9NYL2 800 aaKnown RBP11.96□□□□□ -0.49
SDF2-208ENST00000589788 SLC27A5Q9Y2P5 690 aa11.96□□□□□ -0.49
SDF2-208ENST00000589788 ALPK3Q96L96 1907 aa11.96□□□□□ -0.5
SDF2-208ENST00000589788 CCDC196A0A1B0GTZ2 297 aa11.95□□□□□ -0.5
SDF2-208ENST00000589788 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.95□□□□□ -0.5
SDF2-208ENST00000589788 H0YGN5 161 aa11.95□□□□□ -0.5
SDF2-208ENST00000589788 GCOM1H8Y6P7 765 aaPredicted RBP11.95□□□□□ -0.5
SDF2-208ENST00000589788 OPLAHO14841 1288 aa11.95□□□□□ -0.5
SDF2-208ENST00000589788 ADAMTS4O75173 837 aa11.95□□□□□ -0.5
SDF2-208ENST00000589788 C6orf222P0C671 652 aaPredicted RBP11.95□□□□□ -0.5
SDF2-208ENST00000589788 POLR2MP0CAP2 368 aa11.95□□□□□ -0.5
SDF2-208ENST00000589788 HOXA13P31271 388 aaPredicted RBP11.95□□□□□ -0.5
SDF2-208ENST00000589788 METAP2P50579 478 aaKnown RBP eCLIP11.95□□□□□ -0.5
SDF2-208ENST00000589788 RCAN1P53805 252 aa11.95□□□□□ -0.5
SDF2-208ENST00000589788 PPP2R5BQ15173 497 aa11.95□□□□□ -0.5
SDF2-208ENST00000589788 TAPT1Q6NXT6 567 aa11.95□□□□□ -0.5
SDF2-208ENST00000589788 RUFY3Q7L099 469 aa11.95□□□□□ -0.5
SDF2-208ENST00000589788 C7orf61Q8IZ16 206 aa11.95□□□□□ -0.5
SDF2-208ENST00000589788 CUL5Q93034 780 aa11.95□□□□□ -0.5
SDF2-208ENST00000589788 FERMT2Q96AC1 680 aa11.95□□□□□ -0.5
SDF2-208ENST00000589788 IWS1Q96ST2 819 aa11.95□□□□□ -0.5
SDF2-208ENST00000589788 PDGFCQ9NRA1 345 aa11.95□□□□□ -0.5
SDF2-208ENST00000589788 COL20A1Q9P218 1284 aa11.95□□□□□ -0.5
SDF2-208ENST00000589788 hCG_1642624A0A1W2PR95 340 aa11.94□□□□□ -0.5
SDF2-208ENST00000589788 ADCY6O43306 1168 aa11.94□□□□□ -0.5
SDF2-208ENST00000589788 SMPD1P17405 629 aa11.94□□□□□ -0.5
SDF2-208ENST00000589788 EIF2AK2P19525 551 aaKnown RBP11.94□□□□□ -0.5
SDF2-208ENST00000589788 EDNRBP24530 442 aa11.94□□□□□ -0.5
SDF2-208ENST00000589788 GHRHRQ02643 423 aa11.94□□□□□ -0.5
SDF2-208ENST00000589788 STXBP2Q15833 593 aa11.94□□□□□ -0.5
SDF2-208ENST00000589788 LRRC26Q2I0M4 334 aa11.94□□□□□ -0.5
SDF2-208ENST00000589788 GNASQ5JWF2 1037 aa11.94□□□□□ -0.5
SDF2-208ENST00000589788 HEATR3Q7Z4Q2 680 aa11.94□□□□□ -0.5
SDF2-208ENST00000589788 TLK2Q86UE8 772 aa11.94□□□□□ -0.5
SDF2-208ENST00000589788 FCHSD1Q86WN1 690 aa11.94□□□□□ -0.5
SDF2-208ENST00000589788 FBXL16Q8N461 479 aa11.94□□□□□ -0.5
SDF2-208ENST00000589788 PCSK9Q8NBP7 692 aaKnown RBP11.94□□□□□ -0.5
SDF2-208ENST00000589788 SCFD2Q8WU76 684 aa11.94□□□□□ -0.5
SDF2-208ENST00000589788 LRRN4Q8WUT4 740 aa11.94□□□□□ -0.5
SDF2-208ENST00000589788 ARID3AQ99856 593 aa11.94□□□□□ -0.5
SDF2-208ENST00000589788 TSEN34Q9BSV6 310 aaKnown RBP11.94□□□□□ -0.5
SDF2-208ENST00000589788 WDR11Q9BZH6 1224 aa11.94□□□□□ -0.5
SDF2-208ENST00000589788 UPF3BQ9BZI7 483 aaKnown RBP11.94□□□□□ -0.5
SDF2-208ENST00000589788 TM6SF1Q9BZW5 370 aa11.94□□□□□ -0.5
SDF2-208ENST00000589788 UPF3AQ9H1J1 476 aaKnown RBP11.94□□□□□ -0.5
SDF2-208ENST00000589788 PXMP2Q9NR77 195 aa11.94□□□□□ -0.5
SDF2-208ENST00000589788 PHF24Q9UPV7 400 aa11.94□□□□□ -0.5
SDF2-208ENST00000589788 DYNC1LI2O43237 492 aaPredicted RBP11.93□□□□□ -0.5
SDF2-208ENST00000589788 CST5P28325 142 aaPredicted RBP11.93□□□□□ -0.5
SDF2-208ENST00000589788 ACLYP53396 1101 aa11.93□□□□□ -0.5
SDF2-208ENST00000589788 GJA9P57773 515 aa11.93□□□□□ -0.5
SDF2-208ENST00000589788 KCNA10Q16322 511 aa11.93□□□□□ -0.5
SDF2-208ENST00000589788 DUSP28Q4G0W2 176 aa11.93□□□□□ -0.5
SDF2-208ENST00000589788 KLHDC9Q8NEP7 349 aa11.93□□□□□ -0.5
SDF2-208ENST00000589788 SMARCC2Q8TAQ2 1214 aa11.93□□□□□ -0.5
SDF2-208ENST00000589788 AGXT2Q9BYV1 514 aa11.93□□□□□ -0.5
SDF2-208ENST00000589788 BACH2Q9BYV9 841 aa11.93□□□□□ -0.5
SDF2-208ENST00000589788 GNEQ9Y223 722 aaKnown RBP11.93□□□□□ -0.5
SDF2-208ENST00000589788 Q9Y3F1 56 aa11.93□□□□□ -0.5
SDF2-208ENST00000589788 CNTNAP5Q8WYK1 1306 aa11.93□□□□□ -0.5
SDF2-208ENST00000589788 A0A1W2PQ45 241 aaPredicted RBP11.92□□□□□ -0.5
SDF2-208ENST00000589788 A0A1W2PQY0 241 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 RBM47A0AV96 593 aaKnown RBP11.92□□□□□ -0.5
SDF2-208ENST00000589788 MYADML2A6NDP7 307 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 NKRFO15226 690 aaKnown RBP eCLIP11.92□□□□□ -0.5
SDF2-208ENST00000589788 ZEB2O60315 1214 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 NR3C2P08235 984 aa11.92□□□□□ -0.5
SDF2-208ENST00000589788 TXNP10599 105 aaKnown RBP11.92□□□□□ -0.5
SDF2-208ENST00000589788 MYCLP12524 364 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms