RNA–Protein interactions for RNA: ENST00000588749.1

CACTIN-206, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 3

Gene CACTIN, Length 391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-206ENST00000588749 DGKDQ16760 1214 aa16.63■□□□□ 0.25
CACTIN-206ENST00000588749 PFKFB3Q16875 520 aaPredicted RBP16.63■□□□□ 0.25
CACTIN-206ENST00000588749 CELF3Q5SZQ8 465 aaKnown RBP16.63■□□□□ 0.25
CACTIN-206ENST00000588749 MYSM1Q5VVJ2 828 aa16.63■□□□□ 0.25
CACTIN-206ENST00000588749 XRRA1Q6P2D8 792 aa16.63■□□□□ 0.25
CACTIN-206ENST00000588749 PHKBQ93100 1093 aa16.63■□□□□ 0.25
CACTIN-206ENST00000588749 LRCH3Q96II8 777 aa16.63■□□□□ 0.25
CACTIN-206ENST00000588749 SPATA33Q96N06 139 aa16.63■□□□□ 0.25
CACTIN-206ENST00000588749 NCOA5Q9HCD5 579 aaKnown RBP16.63■□□□□ 0.25
CACTIN-206ENST00000588749 RIC8AQ9NPQ8 531 aa16.63■□□□□ 0.25
CACTIN-206ENST00000588749 TRMT13Q9NUP7 481 aaKnown RBP16.63■□□□□ 0.25
CACTIN-206ENST00000588749 PCDHA6Q9UN73 950 aa16.63■□□□□ 0.25
CACTIN-206ENST00000588749 PCDHA8Q9Y5H6 950 aa16.63■□□□□ 0.25
CACTIN-206ENST00000588749 FIBPO43427 364 aa16.62■□□□□ 0.25
CACTIN-206ENST00000588749 PPFIA3O75145 1194 aa16.62■□□□□ 0.25
CACTIN-206ENST00000588749 ZNF286BP0CG31 522 aa16.62■□□□□ 0.25
CACTIN-206ENST00000588749 SCG2P13521 617 aa16.62■□□□□ 0.25
CACTIN-206ENST00000588749 ICAM3P32942 547 aa16.62■□□□□ 0.25
CACTIN-206ENST00000588749 EPHB4P54760 987 aa16.62■□□□□ 0.25
CACTIN-206ENST00000588749 SEMA3FQ13275 785 aa16.62■□□□□ 0.25
CACTIN-206ENST00000588749 HSDL1Q3SXM5 330 aa16.62■□□□□ 0.25
CACTIN-206ENST00000588749 LRIT3Q3SXY7 679 aa16.62■□□□□ 0.25
CACTIN-206ENST00000588749 C9orf50Q5SZB4 431 aa16.62■□□□□ 0.25
CACTIN-206ENST00000588749 LARP6Q9BRS8 491 aaKnown RBP16.62■□□□□ 0.25
CACTIN-206ENST00000588749 HIPK3Q9H422 1215 aa16.62■□□□□ 0.25
CACTIN-206ENST00000588749 MLXIPQ9HAP2 919 aa16.62■□□□□ 0.25
CACTIN-206ENST00000588749 PDRG1Q9NUG6 133 aa16.62■□□□□ 0.25
CACTIN-206ENST00000588749 SZT2Q5T011 3432 aa16.61■□□□□ 0.25
CACTIN-206ENST00000588749 SMCO2A6NFE2 343 aa16.61■□□□□ 0.25
CACTIN-206ENST00000588749 SPATA31C2B4DYI2 1134 aa16.61■□□□□ 0.25
CACTIN-206ENST00000588749 CYP2C18P33260 490 aa16.61■□□□□ 0.25
CACTIN-206ENST00000588749 AKAP17AQ02040 695 aaKnown RBP16.61■□□□□ 0.25
CACTIN-206ENST00000588749 SHHQ15465 462 aa16.61■□□□□ 0.25
CACTIN-206ENST00000588749 NTRK3Q16288 839 aa16.61■□□□□ 0.25
CACTIN-206ENST00000588749 MFSD5Q6N075 450 aa16.61■□□□□ 0.25
CACTIN-206ENST00000588749 NFRKBQ6P4R8 1299 aa16.61■□□□□ 0.25
CACTIN-206ENST00000588749 NLRX1Q86UT6 975 aa16.61■□□□□ 0.25
CACTIN-206ENST00000588749 KAT2BQ92831 832 aa16.61■□□□□ 0.25
CACTIN-206ENST00000588749 PGBD1Q96JS3 809 aa16.61■□□□□ 0.25
CACTIN-206ENST00000588749 NOC4LQ9BVI4 516 aaKnown RBP16.61■□□□□ 0.25
CACTIN-206ENST00000588749 BCAS3Q9H6U6 928 aa16.61■□□□□ 0.25
CACTIN-206ENST00000588749 EHMT1Q9H9B1 1298 aa16.61■□□□□ 0.25
CACTIN-206ENST00000588749 UMODL1Q5DID0 1318 aa16.61■□□□□ 0.25
CACTIN-206ENST00000588749 PRPF3O43395 683 aaKnown RBP16.6■□□□□ 0.25
CACTIN-206ENST00000588749 SUPT20HL2P0C7V6 817 aa16.6■□□□□ 0.25
CACTIN-206ENST00000588749 CYP2C9P11712 490 aa16.6■□□□□ 0.25
CACTIN-206ENST00000588749 HOXD8P13378 290 aaPredicted RBP16.6■□□□□ 0.25
CACTIN-206ENST00000588749 ANAPC15P60006 121 aa16.6■□□□□ 0.25
CACTIN-206ENST00000588749 NEDD9Q14511 834 aa16.6■□□□□ 0.25
CACTIN-206ENST00000588749 PKN1Q16512 942 aa16.6■□□□□ 0.25
CACTIN-206ENST00000588749 TMEM199Q8N511 208 aa16.6■□□□□ 0.25
CACTIN-206ENST00000588749 SLC26A6Q9BXS9 759 aa16.6■□□□□ 0.25
CACTIN-206ENST00000588749 RNF26Q9BY78 433 aaPredicted RBP16.6■□□□□ 0.25
CACTIN-206ENST00000588749 TMEM260Q9NX78 707 aa16.6■□□□□ 0.25
CACTIN-206ENST00000588749 NOP56O00567 594 aaKnown RBP16.59■□□□□ 0.25
CACTIN-206ENST00000588749 EIF5BO60841 1220 aaKnown RBP16.59■□□□□ 0.25
CACTIN-206ENST00000588749 PPFIA4O75335 1185 aa16.59■□□□□ 0.25
CACTIN-206ENST00000588749 F2P00734 622 aa16.59■□□□□ 0.25
CACTIN-206ENST00000588749 FOSP01100 380 aaPredicted RBP16.59■□□□□ 0.25
CACTIN-206ENST00000588749 CSF2RAP15509 400 aa16.59■□□□□ 0.25
CACTIN-206ENST00000588749 IFNAR1P17181 557 aa16.59■□□□□ 0.25
CACTIN-206ENST00000588749 ITGB5P18084 799 aa16.59■□□□□ 0.25
CACTIN-206ENST00000588749 PSEN2P49810 448 aa16.59■□□□□ 0.25
CACTIN-206ENST00000588749 PTPN11Q06124 597 aaPredicted RBP16.59■□□□□ 0.25
CACTIN-206ENST00000588749 STK3Q13188 491 aa16.59■□□□□ 0.25
CACTIN-206ENST00000588749 PPIGQ13427 754 aaKnown RBP eCLIP16.59■□□□□ 0.25
CACTIN-206ENST00000588749 METTL7BQ6UX53 244 aa16.59■□□□□ 0.25
CACTIN-206ENST00000588749 CYFIP1Q7L576 1253 aa16.59■□□□□ 0.25
CACTIN-206ENST00000588749 TEX2Q8IWB9 1127 aa16.59■□□□□ 0.25
CACTIN-206ENST00000588749 GPRASP2Q96D09 838 aa16.59■□□□□ 0.25
CACTIN-206ENST00000588749 ZNF274Q96GC6 653 aaPredicted RBP16.59■□□□□ 0.25
CACTIN-206ENST00000588749 ALG1Q9BT22 464 aa16.59■□□□□ 0.25
CACTIN-206ENST00000588749 KATNAL1Q9BW62 490 aa16.59■□□□□ 0.25
CACTIN-206ENST00000588749 ANO3Q9BYT9 981 aa16.59■□□□□ 0.25
CACTIN-206ENST00000588749 GLT8D2Q9H1C3 349 aa16.59■□□□□ 0.25
CACTIN-206ENST00000588749 NOD1Q9Y239 953 aa16.59■□□□□ 0.25
CACTIN-206ENST00000588749 ESYT2A0FGR8 921 aa16.58■□□□□ 0.24
CACTIN-206ENST00000588749 CPLX1O14810 134 aa16.58■□□□□ 0.24
CACTIN-206ENST00000588749 SEC24BO95487 1268 aa16.58■□□□□ 0.24
CACTIN-206ENST00000588749 CCL23P55773 120 aa16.58■□□□□ 0.24
CACTIN-206ENST00000588749 SP4Q02446 784 aa16.58■□□□□ 0.24
CACTIN-206ENST00000588749 AP3B2Q13367 1082 aa16.58■□□□□ 0.24
CACTIN-206ENST00000588749 MTMR1Q13613 665 aa16.58■□□□□ 0.24
CACTIN-206ENST00000588749 MFSD10Q14728 455 aa16.58■□□□□ 0.24
CACTIN-206ENST00000588749 KIAA0753Q2KHM9 967 aa16.58■□□□□ 0.24
CACTIN-206ENST00000588749 CCDC12Q8WUD4 166 aaPredicted RBP16.58■□□□□ 0.24
CACTIN-206ENST00000588749 CDHR1Q96JP9 859 aa16.58■□□□□ 0.24
CACTIN-206ENST00000588749 RNPC3Q96LT9 517 aaKnown RBP16.58■□□□□ 0.24
CACTIN-206ENST00000588749 SENP7Q9BQF6 1050 aa16.58■□□□□ 0.24
CACTIN-206ENST00000588749 PKD2L1Q9P0L9 805 aa16.58■□□□□ 0.24
CACTIN-206ENST00000588749 UBIAD1Q9Y5Z9 338 aa16.58■□□□□ 0.24
CACTIN-206ENST00000588749 CLK2P49760 499 aaKnown RBP16.57■□□□□ 0.24
CACTIN-206ENST00000588749 PTGISQ16647 500 aa16.57■□□□□ 0.24
CACTIN-206ENST00000588749 JAKMIP3Q5VZ66 844 aa16.57■□□□□ 0.24
CACTIN-206ENST00000588749 GDF6Q6KF10 455 aaPredicted RBP16.57■□□□□ 0.24
CACTIN-206ENST00000588749 SESTD1Q86VW0 696 aa16.57■□□□□ 0.24
CACTIN-206ENST00000588749 TRIM22Q8IYM9 498 aa16.57■□□□□ 0.24
CACTIN-206ENST00000588749 C7orf31Q8N865 590 aa16.57■□□□□ 0.24
CACTIN-206ENST00000588749 ZMYND12Q9H0C1 365 aa16.57■□□□□ 0.24
CACTIN-206ENST00000588749 WNT8AQ9H1J5 351 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms