RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 PDCD2LQ9BRP1 358 aa13.88□□□□□ -0.19
BRCA1-225ENST00000586385 ZBED2Q9BTP6 218 aa13.88□□□□□ -0.19
BRCA1-225ENST00000586385 IL25Q9H293 177 aa13.88□□□□□ -0.19
BRCA1-225ENST00000586385 BCAS3Q9H6U6 928 aa13.88□□□□□ -0.19
BRCA1-225ENST00000586385 KAT14Q9H8E8 782 aa13.88□□□□□ -0.19
BRCA1-225ENST00000586385 VAT1LQ9HCJ6 419 aa13.88□□□□□ -0.19
BRCA1-225ENST00000586385 MRPL11Q9Y3B7 192 aaKnown RBP13.88□□□□□ -0.19
BRCA1-225ENST00000586385 FAM86C2PA6NEL3 165 aa13.87□□□□□ -0.19
BRCA1-225ENST00000586385 TRIM6-TRIM34B2RNG4 842 aa13.87□□□□□ -0.19
BRCA1-225ENST00000586385 PARNO95453 639 aaKnown RBP13.87□□□□□ -0.19
BRCA1-225ENST00000586385 HOXC8P31273 242 aa13.87□□□□□ -0.19
BRCA1-225ENST00000586385 LAMC2Q13753 1193 aa13.87□□□□□ -0.19
BRCA1-225ENST00000586385 SEC23AQ15436 765 aa13.87□□□□□ -0.19
BRCA1-225ENST00000586385 PLEKHM2Q8IWE5 1019 aa13.87□□□□□ -0.19
BRCA1-225ENST00000586385 SMC5Q8IY18 1101 aa13.87□□□□□ -0.19
BRCA1-225ENST00000586385 ZFP91Q96JP5 570 aaPredicted RBP13.87□□□□□ -0.19
BRCA1-225ENST00000586385 C17orf80Q9BSJ5 609 aa13.87□□□□□ -0.19
BRCA1-225ENST00000586385 C16orf70Q9BSU1 422 aa13.87□□□□□ -0.19
BRCA1-225ENST00000586385 UBE2ZQ9H832 354 aaPredicted RBP13.87□□□□□ -0.19
BRCA1-225ENST00000586385 MRVI1Q9Y6F6 885 aa13.87□□□□□ -0.19
BRCA1-225ENST00000586385 LGR5O75473 907 aa13.86□□□□□ -0.19
BRCA1-225ENST00000586385 CFBP00751 764 aa13.86□□□□□ -0.19
BRCA1-225ENST00000586385 PARP1P09874 1014 aaKnown RBP13.86□□□□□ -0.19
BRCA1-225ENST00000586385 HOXA13P31271 388 aaPredicted RBP13.86□□□□□ -0.19
BRCA1-225ENST00000586385 HTRA4P83105 476 aaPredicted RBP13.86□□□□□ -0.19
BRCA1-225ENST00000586385 TMEM31Q5JXX7 168 aa13.86□□□□□ -0.19
BRCA1-225ENST00000586385 CELF3Q5SZQ8 465 aaKnown RBP13.86□□□□□ -0.19
BRCA1-225ENST00000586385 CWC27Q6UX04 472 aaKnown RBP13.86□□□□□ -0.19
BRCA1-225ENST00000586385 STOX1Q6ZVD7 989 aa13.86□□□□□ -0.19
BRCA1-225ENST00000586385 SERINC5Q86VE9 423 aa13.86□□□□□ -0.19
BRCA1-225ENST00000586385 IQCA1Q86XH1 822 aa13.86□□□□□ -0.19
BRCA1-225ENST00000586385 DHX37Q8IY37 1157 aaKnown RBP13.86□□□□□ -0.19
BRCA1-225ENST00000586385 DBF4BQ8NFT6 615 aa13.86□□□□□ -0.19
BRCA1-225ENST00000586385 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.86□□□□□ -0.19
BRCA1-225ENST00000586385 SP7Q8TDD2 431 aaPredicted RBP13.86□□□□□ -0.19
BRCA1-225ENST00000586385 KATNAL1Q9BW62 490 aa13.86□□□□□ -0.19
BRCA1-225ENST00000586385 ZBTB47Q9UFB7 747 aaPredicted RBP13.86□□□□□ -0.19
BRCA1-225ENST00000586385 PI4K2BG5E9Z4 385 aa13.85□□□□□ -0.19
BRCA1-225ENST00000586385 GPR37L1O60883 481 aa13.85□□□□□ -0.19
BRCA1-225ENST00000586385 PPFIA4O75335 1185 aa13.85□□□□□ -0.19
BRCA1-225ENST00000586385 GGPS1O95749 300 aa13.85□□□□□ -0.19
BRCA1-225ENST00000586385 UBA1P22314 1058 aaKnown RBP13.85□□□□□ -0.19
BRCA1-225ENST00000586385 IKBKEQ14164 716 aa13.85□□□□□ -0.19
BRCA1-225ENST00000586385 PGM5Q15124 567 aa13.85□□□□□ -0.19
BRCA1-225ENST00000586385 CCDC178Q5BJE1 867 aa13.85□□□□□ -0.19
BRCA1-225ENST00000586385 VSIG10LQ86VR7 867 aa13.85□□□□□ -0.19
BRCA1-225ENST00000586385 SPATA33Q96N06 139 aa13.85□□□□□ -0.19
BRCA1-225ENST00000586385 AMNQ9BXJ7 453 aa13.85□□□□□ -0.19
BRCA1-225ENST00000586385 OSBPL3Q9H4L5 887 aa13.85□□□□□ -0.19
BRCA1-225ENST00000586385 MAD2L2Q9UI95 211 aa13.85□□□□□ -0.19
BRCA1-225ENST00000586385 TELO2Q9Y4R8 837 aa13.85□□□□□ -0.19
BRCA1-225ENST00000586385 ARIH1Q9Y4X5 557 aaPredicted RBP13.85□□□□□ -0.19
BRCA1-225ENST00000586385 KIAA1217Q5T5P2 1943 aa13.85□□□□□ -0.19
BRCA1-225ENST00000586385 PALM3A6NDB9 673 aaPredicted RBP13.84□□□□□ -0.19
BRCA1-225ENST00000586385 DHX16O60231 1041 aaKnown RBP13.84□□□□□ -0.19
BRCA1-225ENST00000586385 EFCAB14O75071 495 aa13.84□□□□□ -0.19
BRCA1-225ENST00000586385 MYCLP12524 364 aaPredicted RBP13.84□□□□□ -0.19
BRCA1-225ENST00000586385 NT5C2P49902 561 aa13.84□□□□□ -0.19
BRCA1-225ENST00000586385 MFAP1P55081 439 aaKnown RBP13.84□□□□□ -0.19
BRCA1-225ENST00000586385 LEXMQ3ZCV2 418 aa13.84□□□□□ -0.19
BRCA1-225ENST00000586385 PLEKHG4Q58EX7 1191 aa13.84□□□□□ -0.19
BRCA1-225ENST00000586385 CYB5R4Q7L1T6 521 aa13.84□□□□□ -0.19
BRCA1-225ENST00000586385 FAM178BQ8IXR5 827 aa13.84□□□□□ -0.19
BRCA1-225ENST00000586385 DSCC1Q9BVC3 393 aa13.84□□□□□ -0.19
BRCA1-225ENST00000586385 LAMA4Q16363 1823 aa13.84□□□□□ -0.19
BRCA1-225ENST00000586385 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.83□□□□□ -0.2
BRCA1-225ENST00000586385 RSPH10B2B2RC85 870 aa13.83□□□□□ -0.2
BRCA1-225ENST00000586385 KLRF2D3W0D1 207 aa13.83□□□□□ -0.2
BRCA1-225ENST00000586385 IGHDP01880 384 aa13.83□□□□□ -0.2
BRCA1-225ENST00000586385 RSPH10BP0C881 870 aa13.83□□□□□ -0.2
BRCA1-225ENST00000586385 IL9P15248 144 aa13.83□□□□□ -0.2
BRCA1-225ENST00000586385 KCNA5P22460 613 aa13.83□□□□□ -0.2
BRCA1-225ENST00000586385 THPOP40225 353 aa13.83□□□□□ -0.2
BRCA1-225ENST00000586385 SEMA3FQ13275 785 aa13.83□□□□□ -0.2
BRCA1-225ENST00000586385 B4GALNT3Q6L9W6 998 aa13.83□□□□□ -0.2
BRCA1-225ENST00000586385 MYOCDQ8IZQ8 938 aa13.83□□□□□ -0.2
BRCA1-225ENST00000586385 FBXO22Q8NEZ5 403 aa13.83□□□□□ -0.2
BRCA1-225ENST00000586385 SENP2Q9HC62 589 aa13.83□□□□□ -0.2
BRCA1-225ENST00000586385 INSL6Q9Y581 213 aa13.83□□□□□ -0.2
BRCA1-225ENST00000586385 PCDHA1Q9Y5I3 950 aa13.83□□□□□ -0.2
BRCA1-225ENST00000586385 ZBTB5O15062 677 aa13.82□□□□□ -0.2
BRCA1-225ENST00000586385 TREHO43280 583 aa13.82□□□□□ -0.2
BRCA1-225ENST00000586385 CYTH3O43739 400 aa13.82□□□□□ -0.2
BRCA1-225ENST00000586385 LGALS2P05162 132 aa13.82□□□□□ -0.2
BRCA1-225ENST00000586385 SMIM10L2AP0DMW4 78 aa13.82□□□□□ -0.2
BRCA1-225ENST00000586385 SMIM10L2BP0DMW5 78 aa13.82□□□□□ -0.2
BRCA1-225ENST00000586385 MRPS9P82933 396 aaKnown RBP13.82□□□□□ -0.2
BRCA1-225ENST00000586385 COL19A1Q14993 1142 aa13.82□□□□□ -0.2
BRCA1-225ENST00000586385 CHD1LQ86WJ1 897 aa13.82□□□□□ -0.2
BRCA1-225ENST00000586385 RNPEPQ9H4A4 650 aa13.82□□□□□ -0.2
BRCA1-225ENST00000586385 TAF6LQ9Y6J9 622 aa13.82□□□□□ -0.2
BRCA1-225ENST00000586385 SIP14410 1827 aa13.81□□□□□ -0.2
BRCA1-225ENST00000586385 H3BRB1 525 aa13.81□□□□□ -0.2
BRCA1-225ENST00000586385 AMHP03971 560 aa13.81□□□□□ -0.2
BRCA1-225ENST00000586385 LINC00271P0C7V0 271 aa13.81□□□□□ -0.2
BRCA1-225ENST00000586385 TGFB3P10600 412 aa13.81□□□□□ -0.2
BRCA1-225ENST00000586385 ADAM17P78536 824 aa13.81□□□□□ -0.2
BRCA1-225ENST00000586385 NUCB1Q02818 461 aa13.81□□□□□ -0.2
BRCA1-225ENST00000586385 EPC2Q52LR7 807 aa13.81□□□□□ -0.2
BRCA1-225ENST00000586385 IFIT1BQ5T764 474 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms