RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 KRT2P35908 639 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 SNAP25P60880 206 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 GUCY1B3Q02153 619 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 PLA2G2CQ5R387 149 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 FOXD4L5Q5VV16 416 aaPredicted RBP9.16□□□□□ -0.94
COPS3-215ENST00000578317 ATL3Q6DD88 541 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 CYP4F22Q6NT55 531 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 CCDC174Q6PII3 467 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 CLEC17AQ6ZS10 378 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 MCF2L2Q86YR7 1114 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 RNF135Q8IUD6 432 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 RIOX2Q8IUF8 465 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 CPXCR1Q8N123 301 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 CLEC4DQ8WXI8 215 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 FOXD4L4Q8WXT5 416 aaPredicted RBP9.16□□□□□ -0.94
COPS3-215ENST00000578317 CUL5Q93034 780 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 TNFRSF25Q93038 417 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 CAPNS2Q96L46 248 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 AGBL1Q96MI9 1066 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 PARK7Q99497 189 aaKnown RBP9.16□□□□□ -0.94
COPS3-215ENST00000578317 SPATC1LQ9H0A9 340 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 RAVER2Q9HCJ3 691 aaKnown RBP9.16□□□□□ -0.94
COPS3-215ENST00000578317 MORF4L1Q9UBU8 362 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 CCPG1Q9ULG6 757 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 PHIPQ8WWQ0 1821 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 IGF2BP3O00425 579 aaKnown RBP eCLIP9.16□□□□□ -0.94
COPS3-215ENST00000578317 MEIS2O14770 477 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 OPLAHO14841 1288 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 CNMDO75829 334 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 ALDH1A1P00352 501 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 FOSP01100 380 aaPredicted RBP9.16□□□□□ -0.94
COPS3-215ENST00000578317 RESTQ13127 1097 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 NOSTRINQ8IVI9 506 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 SHCBP1Q8NEM2 672 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 CHST13Q8NET6 341 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 BTBD7Q9P203 1132 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 RIPK3Q9Y572 518 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 ATAD5Q96QE3 1844 aa9.15□□□□□ -0.94
COPS3-215ENST00000578317 CYP2C8P10632 490 aa9.15□□□□□ -0.94
COPS3-215ENST00000578317 HSPA6P17066 643 aa9.15□□□□□ -0.94
COPS3-215ENST00000578317 TRAPPC10P48553 1259 aa9.15□□□□□ -0.94
COPS3-215ENST00000578317 HSD17B4P51659 736 aa9.15□□□□□ -0.94
COPS3-215ENST00000578317 ADCY7P51828 1080 aa9.15□□□□□ -0.94
COPS3-215ENST00000578317 NR5A1Q13285 461 aa9.15□□□□□ -0.94
COPS3-215ENST00000578317 AP3B2Q13367 1082 aa9.15□□□□□ -0.94
COPS3-215ENST00000578317 NCOA4Q13772 614 aa9.15□□□□□ -0.94
COPS3-215ENST00000578317 USH1GQ495M9 461 aa9.15□□□□□ -0.94
COPS3-215ENST00000578317 MCTP1Q6DN14 999 aa9.15□□□□□ -0.94
COPS3-215ENST00000578317 SNRNP48Q6IEG0 339 aaKnown RBP9.15□□□□□ -0.94
COPS3-215ENST00000578317 REXO1Q8N1G1 1221 aaKnown RBP9.15□□□□□ -0.94
COPS3-215ENST00000578317 PLPP7Q8NBV4 271 aa9.15□□□□□ -0.94
COPS3-215ENST00000578317 GPRC5AQ8NFJ5 357 aa9.15□□□□□ -0.94
COPS3-215ENST00000578317 SMCR8Q8TEV9 937 aaPredicted RBP9.15□□□□□ -0.94
COPS3-215ENST00000578317 TRERF1Q96PN7 1200 aa9.15□□□□□ -0.94
COPS3-215ENST00000578317 OCSTAMPQ9BR26 566 aa9.15□□□□□ -0.94
COPS3-215ENST00000578317 UNC93B1Q9H1C4 597 aa9.15□□□□□ -0.94
COPS3-215ENST00000578317 FBXO40Q9UH90 709 aa9.15□□□□□ -0.94
COPS3-215ENST00000578317 PCDHA6Q9UN73 950 aa9.15□□□□□ -0.94
COPS3-215ENST00000578317 PCDHA8Q9Y5H6 950 aa9.15□□□□□ -0.94
COPS3-215ENST00000578317 MYH4Q9Y623 1939 aa9.15□□□□□ -0.95
COPS3-215ENST00000578317 KIF28PB7ZC32 967 aa9.14□□□□□ -0.95
COPS3-215ENST00000578317 GCOM1H8Y6P7 765 aaPredicted RBP9.14□□□□□ -0.95
COPS3-215ENST00000578317 CA12O43570 354 aa9.14□□□□□ -0.95
COPS3-215ENST00000578317 TLR2O60603 784 aa9.14□□□□□ -0.95
COPS3-215ENST00000578317 POLR2MP0CAP2 368 aa9.14□□□□□ -0.95
COPS3-215ENST00000578317 ALAS1P13196 640 aa9.14□□□□□ -0.95
COPS3-215ENST00000578317 ERVK-9P63128 1117 aa9.14□□□□□ -0.95
COPS3-215ENST00000578317 ERVK-24P63145 666 aa9.14□□□□□ -0.95
COPS3-215ENST00000578317 CCNA1P78396 465 aa9.14□□□□□ -0.95
COPS3-215ENST00000578317 CRTC2Q53ET0 693 aaPredicted RBP9.14□□□□□ -0.95
COPS3-215ENST00000578317 C17orf99Q6UX52 265 aa9.14□□□□□ -0.95
COPS3-215ENST00000578317 KRT25Q7Z3Z0 450 aa9.14□□□□□ -0.95
COPS3-215ENST00000578317 FERMT3Q86UX7 667 aa9.14□□□□□ -0.95
COPS3-215ENST00000578317 PHTF2Q8N3S3 785 aa9.14□□□□□ -0.95
COPS3-215ENST00000578317 TNPO1Q92973 898 aaKnown RBP9.14□□□□□ -0.95
COPS3-215ENST00000578317 ZIC5Q96T25 663 aa9.14□□□□□ -0.95
COPS3-215ENST00000578317 ARHGAP9Q9BRR9 750 aa9.14□□□□□ -0.95
COPS3-215ENST00000578317 CFHR5Q9BXR6 569 aa9.14□□□□□ -0.95
COPS3-215ENST00000578317 MOV10L1Q9BXT6 1211 aaKnown RBP9.14□□□□□ -0.95
COPS3-215ENST00000578317 MROH8Q9H579 483 aa9.14□□□□□ -0.95
COPS3-215ENST00000578317 ZFYVE28Q9HCC9 887 aa9.14□□□□□ -0.95
COPS3-215ENST00000578317 TXNRD2Q9NNW7 524 aa9.14□□□□□ -0.95
COPS3-215ENST00000578317 ADGRA2Q96PE1 1338 aa9.14□□□□□ -0.95
COPS3-215ENST00000578317 ADAMTS3O15072 1205 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 BCRP11274 1271 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 USP11P51784 963 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 GNL2Q13823 731 aaKnown RBP9.13□□□□□ -0.95
COPS3-215ENST00000578317 FAM110CQ1W6H9 321 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 MAP7D1Q3KQU3 841 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 RILPL1Q5EBL4 403 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 USP17L6PQ6QN14 398 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 ADAM32Q8TC27 787 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 TBC1D5Q92609 795 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 ACAD9Q9H845 621 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 RNF146Q9NTX7 359 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 BAZ2BQ9UIF8 2168 aaKnown RBP9.13□□□□□ -0.95
COPS3-215ENST00000578317 CCDC194A0A1B0GVG4 234 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 NFIBO00712 420 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 STRNO43815 780 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 CFBP00751 764 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms