RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 A6NJR5 290 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 TOMM70O94826 608 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 KRT83P78385 493 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 PPFIA1Q13136 1202 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 HDAC1Q13547 482 aaPredicted RBP3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 PRPSAP1Q14558 356 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 HLFQ16534 295 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 ACCSLQ4AC99 568 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 CCDC183Q5T5S1 534 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 ATL3Q6DD88 541 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 LRRC31Q6UY01 552 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 MAP7D3Q8IWC1 876 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 NELFCDQ8IXH7 590 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 TTC30BQ8N4P2 665 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 MCPH1Q8NEM0 835 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 SHCBP1Q8NEM2 672 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 STAG1Q8WVM7 1258 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 MYL10Q9BUA6 226 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 NOC4LQ9BVI4 516 aaKnown RBP3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 COLEC11Q9BWP8 271 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 GLIS2Q9BZE0 524 aaPredicted RBP3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 OSBPL5Q9H0X9 879 aaPredicted RBP3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 CLSTN2Q9H4D0 955 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 ZNF302Q9NR11 478 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 USTQ9Y2C2 406 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 UBN2Q6ZU65 1347 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 SSH2Q76I76 1423 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 NEURL4Q96JN8 1562 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 IQGAP1P46940 1657 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 ABCA3Q99758 1704 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 RRN3P2A6NIE6 340 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 ADCY3O60266 1144 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 PQBP1O60828 265 aaKnown RBP3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 LDHAP00338 332 aaKnown RBP3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 AMHP03971 560 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 RALAP11233 206 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 ALDH3A1P30838 453 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 AK2P54819 239 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 OSTNP61366 133 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 FKBP1BP68106 108 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 ZBTB16Q05516 673 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 KIF5AQ12840 1032 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 CALCOCO2Q13137 446 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 PPP2R5CQ13362 524 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 MTMR1Q13613 665 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 PPP1R7Q15435 360 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 ARL13BQ3SXY8 428 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 CHST13Q8NET6 341 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 OR6B3Q8NGW1 331 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 CAPNS2Q96L46 248 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 FAM81BQ96LP2 452 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 SRPK1Q96SB4 655 aaKnown RBP3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 MYO5CQ9NQX4 1742 aa3.21□□□□□ -1.9
SMCHD1-203ENST00000577880 HMGB1P1B2RPK0 211 aaPredicted RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 IKBKBO14920 756 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 MAGEB2O15479 319 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 ZW10O43264 779 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 STAM2O75886 525 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 KIAA0754O94854 1291 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 GNA14O95837 355 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 OR52Z1P0C646 297 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 GAP43P17677 238 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 GBP1P32455 592 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 PIK3CAP42336 1068 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 MRE11P49959 708 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 GSDMDP57764 484 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 RNASE9P60153 205 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 ITIH3Q06033 890 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 PPP2R3AQ06190 1150 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 PAK2Q13177 524 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 DGKDQ16760 1214 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 CFAP157Q5JU67 520 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 CCDC122Q5T0U0 273 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 CASC4Q6P4E1 433 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 ZNF365Q70YC5 407 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 TAOK1Q7L7X3 1001 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 ZNF467Q7Z7K2 595 aaPredicted RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 DDX53Q86TM3 631 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 SCYL3Q8IZE3 742 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 GPR161Q8N6U8 529 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 EFHBQ8N7U6 833 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 CHMP6Q96FZ7 201 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 ACCSQ96QU6 501 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 TESK2Q96S53 571 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 TSEN34Q9BSV6 310 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 NUCKS1Q9H1E3 243 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 SMARCAD1Q9H4L7 1026 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 MROH8Q9H579 483 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 ZSWIM4Q9H7M6 989 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 SLC38A10Q9HBR0 1119 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 VPS54Q9P1Q0 977 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 MAP10Q9P2G4 905 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 PFASO15067 1338 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 PRR36Q9H6K5 1346 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 USP42Q9H9J4 1324 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 PNMA6FA0A0J9YX94 578 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 hCG_1642624A0A1W2PR95 340 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 CXCL11O14625 94 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 MED7O43513 233 aa3.2□□□□□ -1.9
SMCHD1-203ENST00000577880 S100BP04271 92 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms