RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 TRIM67Q6ZTA4 783 aa11□□□□□ -0.65
NPLOC4-219ENST00000576713 CCAR1Q8IX12 1150 aaKnown RBP11□□□□□ -0.65
NPLOC4-219ENST00000576713 TRPV1Q8NER1 839 aa11□□□□□ -0.65
NPLOC4-219ENST00000576713 SOCS4Q8WXH5 440 aa11□□□□□ -0.65
NPLOC4-219ENST00000576713 TRERF1Q96PN7 1200 aa11□□□□□ -0.65
NPLOC4-219ENST00000576713 MMP19Q99542 508 aa11□□□□□ -0.65
NPLOC4-219ENST00000576713 APBA2Q99767 749 aa11□□□□□ -0.65
NPLOC4-219ENST00000576713 TM6SF1Q9BZW5 370 aa11□□□□□ -0.65
NPLOC4-219ENST00000576713 SLC12A7Q9Y666 1083 aa11□□□□□ -0.65
NPLOC4-219ENST00000576713 STRNO43815 780 aa10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 PPFIA3O75145 1194 aa10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 HMGB1P09429 215 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 FCER1AP12319 257 aa10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 SKIP12755 728 aa10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 XRCC5P13010 732 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 RGS2P41220 211 aa10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 CACNB2Q08289 660 aaPredicted RBP10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 INTS6LQ5JSJ4 861 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 MAP3K21Q5TCX8 1036 aa10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 SLC30A10Q6XR72 485 aa10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 TMTC3Q6ZXV5 915 aa10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 HOMER1Q86YM7 354 aa10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 ABRAQ8N0Z2 381 aa10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 FBXL16Q8N461 479 aa10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 FANCBQ8NB91 859 aa10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 MAML3Q96JK9 1138 aa10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 MAP3K14Q99558 947 aa10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 CWC22Q9HCG8 908 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 CTDP1Q9Y5B0 961 aaPredicted RBP10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 IVNS1ABPQ9Y6Y0 642 aa10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 CNTNAP5Q8WYK1 1306 aa10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 NID2Q14112 1375 aa10.99□□□□□ -0.65
NPLOC4-219ENST00000576713 GOLGA8BA8MQT2 603 aa10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 TNFRSF10AO00220 468 aa10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 ZBTB5O15062 677 aa10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 ZBTB43O43298 467 aa10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 DHX16O60231 1041 aaKnown RBP10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 LARGE1O95461 756 aa10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 ADH1CP00326 375 aa10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 CCL5P13501 91 aa10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 CCND3P30281 292 aaPredicted RBP10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 ADD1P35611 737 aaKnown RBP10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 EVCP57679 992 aa10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 ANAPC15P60006 121 aa10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 PRAMEF19Q5SWL8 479 aa10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 TMTC2Q8N394 836 aa10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 FAM133AQ8N9E0 248 aa10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 CHST13Q8NET6 341 aa10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 SNIP1Q8TAD8 396 aaKnown RBP10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 ACAD9Q9H845 621 aa10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 NCOA5Q9HCD5 579 aaKnown RBP10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 CYP39A1Q9NYL5 469 aa10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 COL20A1Q9P218 1284 aa10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 MAFBQ9Y5Q3 323 aaPredicted RBP10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 CYP46A1Q9Y6A2 500 aa10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 LRRC37A2A6NM11 1700 aa10.98□□□□□ -0.65
NPLOC4-219ENST00000576713 GOLGA8AA7E2F4 631 aa10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 ADAMTS3O15072 1205 aa10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 HMGCRP04035 888 aa10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 PTGS1P23219 599 aa10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 PSMA5P28066 241 aa10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 PDIA3P30101 505 aaKnown RBP10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 AK2P54819 239 aa10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 PRR20EP86478 221 aa10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 PRR20CP86479 221 aa10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 PRR20DP86480 221 aa10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 PRR20BP86481 221 aa10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 PRR20AP86496 221 aa10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 BAATQ14032 418 aaPredicted RBP10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 KCTD2Q14681 263 aa10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 NSMFQ6X4W1 530 aa10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 DPP9Q86TI2 863 aa10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 FBXO11Q86XK2 927 aa10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 ANKRD35Q8N283 1001 aa10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 PLPP7Q8NBV4 271 aa10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 CTCFLQ8NI51 663 aaPredicted RBP10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 SHISA4Q96DD7 197 aa10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 SPZ1Q9BXG8 430 aa10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 PDRG1Q9NUG6 133 aa10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 TPCN1Q9ULQ1 816 aa10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 PLXNA1Q9UIW2 1896 aa10.97□□□□□ -0.65
NPLOC4-219ENST00000576713 ADCY6O43306 1168 aa10.96□□□□□ -0.65
NPLOC4-219ENST00000576713 SNAI1O95863 264 aaPredicted RBP10.96□□□□□ -0.65
NPLOC4-219ENST00000576713 FSHRP23945 695 aa10.96□□□□□ -0.65
NPLOC4-219ENST00000576713 COPB2P35606 906 aa10.96□□□□□ -0.65
NPLOC4-219ENST00000576713 CCT2P78371 535 aaKnown RBP10.96□□□□□ -0.65
NPLOC4-219ENST00000576713 ST3GAL1Q11201 340 aa10.96□□□□□ -0.65
NPLOC4-219ENST00000576713 NR5A1Q13285 461 aa10.96□□□□□ -0.65
NPLOC4-219ENST00000576713 NTRK3Q16288 839 aa10.96□□□□□ -0.65
NPLOC4-219ENST00000576713 RTN1Q16799 776 aa10.96□□□□□ -0.65
NPLOC4-219ENST00000576713 MAP7D1Q3KQU3 841 aa10.96□□□□□ -0.65
NPLOC4-219ENST00000576713 TKFCQ3LXA3 575 aa10.96□□□□□ -0.65
NPLOC4-219ENST00000576713 TMEM63BQ5T3F8 832 aa10.96□□□□□ -0.65
NPLOC4-219ENST00000576713 OLFML2BQ68BL8 750 aa10.96□□□□□ -0.65
NPLOC4-219ENST00000576713 TRAF7Q6Q0C0 670 aa10.96□□□□□ -0.65
NPLOC4-219ENST00000576713 C22orf23Q9BZE7 217 aa10.96□□□□□ -0.65
NPLOC4-219ENST00000576713 KATNBL1Q9H079 304 aa10.96□□□□□ -0.65
NPLOC4-219ENST00000576713 PAK6Q9NQU5 681 aaPredicted RBP10.96□□□□□ -0.65
NPLOC4-219ENST00000576713 TOR4AQ9NXH8 423 aa10.96□□□□□ -0.65
NPLOC4-219ENST00000576713 BIN2Q9UBW5 565 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms