RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 MOCS3O95396 460 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 POLR2MP0CAP2 368 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 PWP1Q13610 501 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 DMC1Q14565 340 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 RRM2BQ7LG56 351 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 REXO1Q8N1G1 1221 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 EFHD1Q9BUP0 239 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 CASS4Q9NQ75 786 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 LRRN2O75325 713 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 CD58P19256 250 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 ZNF75DP51815 510 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 POLR2FP61218 127 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 ENAHQ8N8S7 591 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 KLC2Q9H0B6 622 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 PSTPIP2Q9H939 334 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 PCDHA12Q9UN75 941 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 ZNF711Q9Y462 761 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 NPM3O75607 178 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 NKX1-1Q15270 411 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 ELMSAN1Q6PJG2 1045 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 SENP1Q9P0U3 644 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 DBNLQ9UJU6 430 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 TTC21BQ7Z4L5 1316 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 ZFXP17010 805 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 DDX53Q86TM3 631 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 KIAA1468Q9P260 1216 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 TRIP13Q15645 432 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 DSTYKQ6XUX3 929 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 KRT8P05787 483 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 HSPA2P54652 639 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 NANOGNBQ7Z5D8 188 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 TEX2Q8IWB9 1127 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 PCIF1Q9H4Z3 704 aa17.13■□□□□ 0.33
CACNA1A-202ENST00000573710 OSBPP22059 807 aa17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 NFX1Q12986 1120 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 MFSD4BQ5TF39 518 aa17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 SCN4BQ8IWT1 228 aa17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 KDM1AO60341 852 aa17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 AKIRIN2Q53H80 203 aa17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 FGFR1OP2Q9NVK5 253 aa17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 DNAJC17Q9NVM6 304 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 SEC24DO94855 1032 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 CERKLQ49MI3 558 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 CCDC141Q6ZP82 1450 aa17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 GPAA1O43292 621 aa17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 MFSD14BQ5SR56 506 aa17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 FBXO41Q8TF61 875 aa17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 SNX2O60749 519 aa17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 GRK2P25098 689 aa17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 ALDH1B1P30837 517 aa17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 HDLBPQ00341 1268 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 C11orf96Q7Z7L8 435 aa17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 FBXO11Q86XK2 927 aa17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 YAF2Q8IY57 180 aa17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 CHURC1Q8WUH1 139 aa17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 ARHGAP26Q9UNA1 814 aa17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 FAM135AQ9P2D6 1515 aa17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 PPP1R2P41236 205 aa17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 RNPEPQ9H4A4 650 aa17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 YY1AP1Q9H869 796 aa17.12■□□□□ 0.33
CACNA1A-202ENST00000573710 AGRPO00253 132 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 GSNP06396 782 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 PDHA1P08559 390 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 HSPA1AP0DMV8 641 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 HSPA1BP0DMV9 641 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 FGD2Q7Z6J4 655 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 XAGE2Q96GT9 111 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 NLRP4Q96MN2 994 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 TYW1Q9NV66 732 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 STX18Q9P2W9 335 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 HECW1Q76N89 1606 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 MYH10P35580 1976 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 DDHD2O94830 711 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 SLC44A4Q53GD3 710 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 PAPOLBQ9NRJ5 636 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 LARSQ9P2J5 1176 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 MCM8Q9UJA3 840 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 L3MBTL1Q9Y468 752 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 TCP11X2Q5H9J9 407 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 SELENONQ9NZV5 590 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 KIAA1107Q9UPP5 1409 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 CASKIN1Q8WXD9 1431 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 HNRNPDLO14979 420 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 ZNF202O95125 648 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 SLCO1A2P46721 670 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 TDRD7Q8NHU6 1098 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 GJA10Q969M2 543 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 GRIN1Q05586 938 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 KCTD2Q14681 263 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 PDXDC1Q6P996 788 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 GRIN2BQ13224 1484 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 BAG6P46379 1132 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 OCA2Q04671 838 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 SIX6OS1Q8N1H7 587 aa17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 CAB39Q9Y376 341 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-202ENST00000573710 IFT43Q96FT9 208 aa17.1■□□□□ 0.33
CACNA1A-202ENST00000573710 RASSF10A6NK89 507 aa17.1■□□□□ 0.33
CACNA1A-202ENST00000573710 KLC3Q6P597 504 aa17.1■□□□□ 0.33
CACNA1A-202ENST00000573710 FAM49AQ9H0Q0 323 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms