RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 RGS20O76081 388 aa17.14■□□□□ 0.33
NPLOC4-207ENST00000572346 F2P00734 622 aa17.14■□□□□ 0.33
NPLOC4-207ENST00000572346 CKBP12277 381 aa17.14■□□□□ 0.33
NPLOC4-207ENST00000572346 KCNJ6P48051 423 aa17.14■□□□□ 0.33
NPLOC4-207ENST00000572346 PSEN2P49810 448 aa17.14■□□□□ 0.33
NPLOC4-207ENST00000572346 WDR5P61964 334 aaKnown RBP17.14■□□□□ 0.33
NPLOC4-207ENST00000572346 TFF2Q03403 129 aa17.14■□□□□ 0.33
NPLOC4-207ENST00000572346 LAMC2Q13753 1193 aa17.14■□□□□ 0.33
NPLOC4-207ENST00000572346 CYB5R4Q7L1T6 521 aa17.14■□□□□ 0.33
NPLOC4-207ENST00000572346 DHX37Q8IY37 1157 aaKnown RBP17.14■□□□□ 0.33
NPLOC4-207ENST00000572346 C7orf31Q8N865 590 aa17.14■□□□□ 0.33
NPLOC4-207ENST00000572346 NCOA7Q8NI08 942 aa17.14■□□□□ 0.33
NPLOC4-207ENST00000572346 PPTC7Q8NI37 304 aa17.14■□□□□ 0.33
NPLOC4-207ENST00000572346 ARNTL2Q8WYA1 636 aa17.14■□□□□ 0.33
NPLOC4-207ENST00000572346 PDCD2LQ9BRP1 358 aa17.14■□□□□ 0.33
NPLOC4-207ENST00000572346 ALG1Q9BT22 464 aa17.14■□□□□ 0.33
NPLOC4-207ENST00000572346 KATNAL1Q9BW62 490 aa17.14■□□□□ 0.33
NPLOC4-207ENST00000572346 USP26Q9BXU7 913 aa17.14■□□□□ 0.33
NPLOC4-207ENST00000572346 MAD2L2Q9UI95 211 aa17.14■□□□□ 0.33
NPLOC4-207ENST00000572346 HAS3O00219 553 aa17.13■□□□□ 0.33
NPLOC4-207ENST00000572346 TLL1O43897 1013 aa17.13■□□□□ 0.33
NPLOC4-207ENST00000572346 NBNO60934 754 aa17.13■□□□□ 0.33
NPLOC4-207ENST00000572346 PARNO95453 639 aaKnown RBP17.13■□□□□ 0.33
NPLOC4-207ENST00000572346 ZNF286BP0CG31 522 aa17.13■□□□□ 0.33
NPLOC4-207ENST00000572346 BMP1P13497 986 aa17.13■□□□□ 0.33
NPLOC4-207ENST00000572346 HSPA4P34932 840 aa17.13■□□□□ 0.33
NPLOC4-207ENST00000572346 MFSD10Q14728 455 aa17.13■□□□□ 0.33
NPLOC4-207ENST00000572346 SKIV2LQ15477 1246 aaKnown RBP17.13■□□□□ 0.33
NPLOC4-207ENST00000572346 KIAA0753Q2KHM9 967 aa17.13■□□□□ 0.33
NPLOC4-207ENST00000572346 KRT40Q6A162 431 aa17.13■□□□□ 0.33
NPLOC4-207ENST00000572346 STOX1Q6ZVD7 989 aa17.13■□□□□ 0.33
NPLOC4-207ENST00000572346 SPRED2Q7Z698 418 aa17.13■□□□□ 0.33
NPLOC4-207ENST00000572346 MAP3K20Q9NYL2 800 aaKnown RBP17.13■□□□□ 0.33
NPLOC4-207ENST00000572346 PCDHA1Q9Y5I3 950 aa17.13■□□□□ 0.33
NPLOC4-207ENST00000572346 BAZ2BQ9UIF8 2168 aaKnown RBP17.12■□□□□ 0.33
NPLOC4-207ENST00000572346 PALM3A6NDB9 673 aaPredicted RBP17.12■□□□□ 0.33
NPLOC4-207ENST00000572346 CXCL10P02778 98 aa17.12■□□□□ 0.33
NPLOC4-207ENST00000572346 MYCLP12524 364 aaPredicted RBP17.12■□□□□ 0.33
NPLOC4-207ENST00000572346 HOXD8P13378 290 aaPredicted RBP17.12■□□□□ 0.33
NPLOC4-207ENST00000572346 HOXA13P31271 388 aaPredicted RBP17.12■□□□□ 0.33
NPLOC4-207ENST00000572346 PTK7Q13308 1070 aa17.12■□□□□ 0.33
NPLOC4-207ENST00000572346 KRT32Q14532 448 aa17.12■□□□□ 0.33
NPLOC4-207ENST00000572346 PGM5Q15124 567 aa17.12■□□□□ 0.33
NPLOC4-207ENST00000572346 AAK1Q2M2I8 961 aa17.12■□□□□ 0.33
NPLOC4-207ENST00000572346 SLC35G1Q2M3R5 365 aa17.12■□□□□ 0.33
NPLOC4-207ENST00000572346 MYSM1Q5VVJ2 828 aa17.12■□□□□ 0.33
NPLOC4-207ENST00000572346 CNKSR3Q6P9H4 555 aa17.12■□□□□ 0.33
NPLOC4-207ENST00000572346 TMCO2Q7Z6W1 182 aaPredicted RBP17.12■□□□□ 0.33
NPLOC4-207ENST00000572346 SAMD3Q8N6K7 520 aa17.12■□□□□ 0.33
NPLOC4-207ENST00000572346 COL4A4P53420 1690 aaPredicted RBP17.11■□□□□ 0.33
NPLOC4-207ENST00000572346 LCHNA4D1U4 455 aa17.11■□□□□ 0.33
NPLOC4-207ENST00000572346 SORBS3O60504 671 aa17.11■□□□□ 0.33
NPLOC4-207ENST00000572346 SEC24BO95487 1268 aa17.11■□□□□ 0.33
NPLOC4-207ENST00000572346 KCNQ1P51787 676 aa17.11■□□□□ 0.33
NPLOC4-207ENST00000572346 DEFB103AP81534 67 aa17.11■□□□□ 0.33
NPLOC4-207ENST00000572346 GRB10Q13322 594 aa17.11■□□□□ 0.33
NPLOC4-207ENST00000572346 TCTN1Q2MV58 587 aa17.11■□□□□ 0.33
NPLOC4-207ENST00000572346 TRIM71Q2Q1W2 868 aaKnown RBP17.11■□□□□ 0.33
NPLOC4-207ENST00000572346 HSDL1Q3SXM5 330 aa17.11■□□□□ 0.33
NPLOC4-207ENST00000572346 CELF3Q5SZQ8 465 aaKnown RBP17.11■□□□□ 0.33
NPLOC4-207ENST00000572346 KCNV1Q6PIU1 500 aa17.11■□□□□ 0.33
NPLOC4-207ENST00000572346 TRAF7Q6Q0C0 670 aa17.11■□□□□ 0.33
NPLOC4-207ENST00000572346 VSIG10LQ86VR7 867 aa17.11■□□□□ 0.33
NPLOC4-207ENST00000572346 HOMER1Q86YM7 354 aa17.11■□□□□ 0.33
NPLOC4-207ENST00000572346 IL31RAQ8NI17 732 aa17.11■□□□□ 0.33
NPLOC4-207ENST00000572346 WNT8BQ93098 351 aa17.11■□□□□ 0.33
NPLOC4-207ENST00000572346 NECAB3Q96P71 396 aaPredicted RBP17.11■□□□□ 0.33
NPLOC4-207ENST00000572346 UPF2Q9HAU5 1272 aaKnown RBP17.11■□□□□ 0.33
NPLOC4-207ENST00000572346 TAF6LQ9Y6J9 622 aa17.11■□□□□ 0.33
NPLOC4-207ENST00000572346 ABHD14A-ACY1A0A1B0GW23 586 aa17.1■□□□□ 0.33
NPLOC4-207ENST00000572346 RBAK-RBAKDNI3L0D1 243 aa17.1■□□□□ 0.33
NPLOC4-207ENST00000572346 LPXNO60711 386 aa17.1■□□□□ 0.33
NPLOC4-207ENST00000572346 PPFIA4O75335 1185 aa17.1■□□□□ 0.33
NPLOC4-207ENST00000572346 GGPS1O95749 300 aa17.1■□□□□ 0.33
NPLOC4-207ENST00000572346 COL9A1P20849 921 aa17.1■□□□□ 0.33
NPLOC4-207ENST00000572346 ZNF200P98182 395 aaPredicted RBP17.1■□□□□ 0.33
NPLOC4-207ENST00000572346 SP2Q02086 613 aa17.1■□□□□ 0.33
NPLOC4-207ENST00000572346 HIC1Q14526 733 aa17.1■□□□□ 0.33
NPLOC4-207ENST00000572346 GRM4Q14833 912 aa17.1■□□□□ 0.33
NPLOC4-207ENST00000572346 ZNF618Q5T7W0 954 aa17.1■□□□□ 0.33
NPLOC4-207ENST00000572346 RASEFQ8IZ41 740 aa17.1■□□□□ 0.33
NPLOC4-207ENST00000572346 SPATA33Q96N06 139 aa17.1■□□□□ 0.33
NPLOC4-207ENST00000572346 PIGSQ96S52 555 aa17.1■□□□□ 0.33
NPLOC4-207ENST00000572346 ZBED2Q9BTP6 218 aa17.1■□□□□ 0.33
NPLOC4-207ENST00000572346 RIOX1Q9H6W3 641 aa17.1■□□□□ 0.33
NPLOC4-207ENST00000572346 BDP1A6H8Y1 2624 aa17.1■□□□□ 0.33
NPLOC4-207ENST00000572346 ERICH2A1L162 156 aa17.09■□□□□ 0.33
NPLOC4-207ENST00000572346 GJB5O95377 273 aa17.09■□□□□ 0.33
NPLOC4-207ENST00000572346 TGFB3P10600 412 aa17.09■□□□□ 0.33
NPLOC4-207ENST00000572346 UBA1P22314 1058 aaKnown RBP17.09■□□□□ 0.33
NPLOC4-207ENST00000572346 MBTPS1Q14703 1052 aa17.09■□□□□ 0.33
NPLOC4-207ENST00000572346 TSGA10IPQ3SY00 556 aa17.09■□□□□ 0.33
NPLOC4-207ENST00000572346 GPKOWQ92917 476 aaPredicted RBP eCLIP17.09■□□□□ 0.33
NPLOC4-207ENST00000572346 ZFP91Q96JP5 570 aaPredicted RBP17.09■□□□□ 0.33
NPLOC4-207ENST00000572346 NEK1Q96PY6 1258 aa17.09■□□□□ 0.33
NPLOC4-207ENST00000572346 C16orf70Q9BSU1 422 aa17.09■□□□□ 0.33
NPLOC4-207ENST00000572346 SENP2Q9HC62 589 aa17.09■□□□□ 0.33
NPLOC4-207ENST00000572346 COG5Q9UP83 839 aa17.09■□□□□ 0.33
NPLOC4-207ENST00000572346 SNX14Q9Y5W7 946 aa17.09■□□□□ 0.33
NPLOC4-207ENST00000572346 GCOM1H8Y6P7 765 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms