RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	NIM1K	Q8IY84	436 aa		13.29	□□□□□ -0.28
SPG7-222	ENST00000569820	PRPF38A	Q8NAV1	312 aa	Known RBP	13.29	□□□□□ -0.28
SPG7-222	ENST00000569820	VAT1L	Q9HCJ6	419 aa		13.29	□□□□□ -0.28
SPG7-222	ENST00000569820	ZNRF3	Q9ULT6	936 aa		13.29	□□□□□ -0.28
SPG7-222	ENST00000569820	ITIH6	Q6UXX5	1313 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	POLD1	P28340	1107 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	MCM7	P33993	719 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	GNGT1	P63211	74 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	NEDD9	Q14511	834 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	KLHL10	Q6JEL2	608 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	KANK3	Q6NY19	840 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	RPGRIP1	Q96KN7	1286 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	SLF1	Q9BQI6	1058 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	RABEP2	Q9H5N1	569 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	GPCPD1	Q9NPB8	672 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	ABHD10	Q9NUJ1	306 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	CNTNAP1	P78357	1384 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	GRIN2D	O15399	1336 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	CCDC194	A0A1B0GVG4	234 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	ESYT2	A0FGR8	921 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	ACTN4	O43707	911 aa	Known RBP	13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	EEF2	P13639	858 aa	Known RBP	13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	ELF1	P32519	619 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	ATP2B2	Q01814	1243 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	DALRD3	Q5D0E6	543 aa	Known RBP	13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	GSPT2	Q8IYD1	628 aa	Known RBP	13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	C4orf32	Q8N8J7	132 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	CABS1	Q96KC9	395 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	MMS19	Q96T76	1030 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	NYAP2	Q9P242	653 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	HDAC9	Q9UKV0	1011 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820	GUCA1B	Q9UMX6	200 aa		13.28	□□□□□ -0.28
SPG7-222	ENST00000569820		A0A087X0B3	334 aa		13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	CLRN2	A0PK11	232 aa		13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	hCG_1984214	I3L0E3	225 aa		13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	ENC1	O14682	589 aa		13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	ZMYND10	O75800	440 aa		13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	STX17	P56962	302 aa		13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	CKAP4	Q07065	602 aa	Known RBP	13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	DLGAP5	Q15398	846 aa		13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	IL17A	Q16552	155 aa		13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	GPATCH4	Q5T3I0	446 aa	Known RBP	13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	CDKAL1	Q5VV42	579 aa		13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	TMEM179	Q6ZVK1	233 aa		13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	SIAH1	Q8IUQ4	282 aa		13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	ZNF713	Q8N859	430 aa	Predicted RBP	13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	SYMPK	Q92797	1274 aa	Known RBP	13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	MKL1	Q969V6	931 aa		13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	EPSTI1	Q96J88	318 aa		13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	CSRNP1	Q96S65	589 aa		13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	KANSL2	Q9H9L4	492 aa		13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	JMJD4	Q9H9V9	463 aa		13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	ZNF70	Q9UC06	446 aa	Predicted RBP	13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	SAR1B	Q9Y6B6	198 aa		13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	CAPN7	Q9Y6W3	813 aa		13.27	□□□□□ -0.28
SPG7-222	ENST00000569820	ATXN2	Q99700	1313 aa	Known RBP	13.27	□□□□□ -0.29
SPG7-222	ENST00000569820	SMCO2	A6NFE2	343 aa		13.27	□□□□□ -0.29
SPG7-222	ENST00000569820	TCP10L2	B9ZVM9	353 aa		13.27	□□□□□ -0.29
SPG7-222	ENST00000569820	GDF11	O95390	407 aa		13.27	□□□□□ -0.29
SPG7-222	ENST00000569820	JAG1	P78504	1218 aa		13.27	□□□□□ -0.29
SPG7-222	ENST00000569820	CXCL9	Q07325	125 aa		13.27	□□□□□ -0.29
SPG7-222	ENST00000569820	RRP1B	Q14684	758 aa	Known RBP	13.27	□□□□□ -0.29
SPG7-222	ENST00000569820	SEPT2	Q15019	361 aa		13.27	□□□□□ -0.29
SPG7-222	ENST00000569820	INF2	Q27J81	1249 aa		13.27	□□□□□ -0.29
SPG7-222	ENST00000569820	SPDYE2	Q495Y8	402 aa		13.27	□□□□□ -0.29
SPG7-222	ENST00000569820	TTBK2	Q6IQ55	1244 aa		13.27	□□□□□ -0.29
SPG7-222	ENST00000569820	OGFOD1	Q8N543	542 aa		13.27	□□□□□ -0.29
SPG7-222	ENST00000569820	AGBL3	Q8NEM8	1001 aa		13.27	□□□□□ -0.29
SPG7-222	ENST00000569820	SPATA20	Q8TB22	786 aa		13.27	□□□□□ -0.29
SPG7-222	ENST00000569820	NUP88	Q99567	741 aa	Predicted RBP	13.27	□□□□□ -0.29
SPG7-222	ENST00000569820	TMOD2	Q9NZR1	351 aa		13.27	□□□□□ -0.29
SPG7-222	ENST00000569820	HDAC6	Q9UBN7	1215 aa		13.27	□□□□□ -0.29
SPG7-222	ENST00000569820	NFKBIE	O00221	500 aa		13.26	□□□□□ -0.29
SPG7-222	ENST00000569820	KIAA0754	O94854	1291 aa		13.26	□□□□□ -0.29
SPG7-222	ENST00000569820	ICA1	Q05084	483 aa		13.26	□□□□□ -0.29
SPG7-222	ENST00000569820	CCDC96	Q2M329	555 aa		13.26	□□□□□ -0.29
SPG7-222	ENST00000569820	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.26	□□□□□ -0.29
SPG7-222	ENST00000569820	KCTD1	Q719H9	257 aa		13.26	□□□□□ -0.29
SPG7-222	ENST00000569820	ADGRF4	Q8IZF3	695 aa		13.26	□□□□□ -0.29
SPG7-222	ENST00000569820	SGIP1	Q9BQI5	828 aa		13.26	□□□□□ -0.29
SPG7-222	ENST00000569820	JPH2	Q9BR39	696 aa	Predicted RBP	13.26	□□□□□ -0.29
SPG7-222	ENST00000569820	TAOK3	Q9H2K8	898 aa		13.26	□□□□□ -0.29
SPG7-222	ENST00000569820	C6orf50	Q9HD87	102 aa		13.26	□□□□□ -0.29
SPG7-222	ENST00000569820	SAMM50	Q9Y512	469 aa		13.26	□□□□□ -0.29
SPG7-222	ENST00000569820	GOLGA8K	D6RF30	607 aa		13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	PPP1R11	O60927	126 aa	Predicted RBP	13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	NEBL	O76041	1014 aa		13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	MYBL2	P10244	700 aa		13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	GNA11	P29992	359 aa		13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	ABCB5	Q2M3G0	1257 aa		13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	NAIF1	Q69YI7	327 aa	Predicted RBP	13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	B4GALNT4	Q76KP1	1039 aa		13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	KRT25	Q7Z3Z0	450 aa		13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	MTMR14	Q8NCE2	650 aa		13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	MTMR8	Q96EF0	704 aa		13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	CAPZA3	Q96KX2	299 aa		13.25	□□□□□ -0.29
SPG7-222	ENST00000569820	VEZT	Q9HBM0	779 aa		13.25	□□□□□ -0.29

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