RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 CCSER1Q9C0I3 900 aa34.47■■■■□ 3.11
CTCF-203ENST00000566078 JADE2Q9NQC1 790 aa34.47■■■■□ 3.11
CTCF-203ENST00000566078 ADD3Q9UEY8 706 aaKnown RBP34.47■■■■□ 3.11
CTCF-203ENST00000566078 BCRP11274 1271 aa34.46■■■■□ 3.11
CTCF-203ENST00000566078 KRBA2Q6ZNG9 492 aa34.46■■■■□ 3.11
CTCF-203ENST00000566078 CABP7Q86V35 215 aa34.46■■■■□ 3.11
CTCF-203ENST00000566078 SLC5A5Q92911 643 aa34.46■■■■□ 3.11
CTCF-203ENST00000566078 IWS1Q96ST2 819 aa34.46■■■■□ 3.11
CTCF-203ENST00000566078 SDF4Q9BRK5 362 aa34.46■■■■□ 3.11
CTCF-203ENST00000566078 ZNF577Q9BSK1 485 aa34.46■■■■□ 3.11
CTCF-203ENST00000566078 ZNF236Q9UL36 1845 aa34.46■■■■□ 3.11
CTCF-203ENST00000566078 MGAMO43451 1857 aa34.46■■■■□ 3.11
CTCF-203ENST00000566078 SOWAHBA6NEL2 793 aa34.45■■■■□ 3.11
CTCF-203ENST00000566078 PGK2P07205 417 aa34.45■■■■□ 3.11
CTCF-203ENST00000566078 TM4SF4P48230 202 aa34.45■■■■□ 3.11
CTCF-203ENST00000566078 KARSQ15046 597 aaKnown RBP34.45■■■■□ 3.11
CTCF-203ENST00000566078 DEFB115Q30KQ5 88 aa34.45■■■■□ 3.11
CTCF-203ENST00000566078 CNNM3Q8NE01 707 aa34.45■■■■□ 3.11
CTCF-203ENST00000566078 RASSF8Q8NHQ8 419 aa34.45■■■■□ 3.11
CTCF-203ENST00000566078 RASSF10A6NK89 507 aa34.44■■■■□ 3.1
CTCF-203ENST00000566078 CTAGE5O15320 804 aa34.44■■■■□ 3.1
CTCF-203ENST00000566078 MTMR1Q13613 665 aa34.44■■■■□ 3.1
CTCF-203ENST00000566078 SERTAD1Q9UHV2 236 aa34.44■■■■□ 3.1
CTCF-203ENST00000566078 ZNF445P59923 1031 aa34.44■■■■□ 3.1
CTCF-203ENST00000566078 LRCH2Q5VUJ6 765 aa34.44■■■■□ 3.1
CTCF-203ENST00000566078 CKAP2LQ8IYA6 745 aa34.44■■■■□ 3.1
CTCF-203ENST00000566078 PYM1Q9BRP8 204 aaKnown RBP34.44■■■■□ 3.1
CTCF-203ENST00000566078 KCNH7Q9NS40 1196 aa34.44■■■■□ 3.1
CTCF-203ENST00000566078 DNAJC25-GNG10A0A024R161 153 aa34.43■■■■□ 3.1
CTCF-203ENST00000566078 ACTN4O43707 911 aaKnown RBP34.43■■■■□ 3.1
CTCF-203ENST00000566078 NOGQ13253 232 aa34.43■■■■□ 3.1
CTCF-203ENST00000566078 ZRSR1Q15695 479 aaKnown RBP34.43■■■■□ 3.1
CTCF-203ENST00000566078 CAPNS2Q96L46 248 aa34.43■■■■□ 3.1
CTCF-203ENST00000566078 MMTAG2Q9BU76 263 aaKnown RBP34.43■■■■□ 3.1
CTCF-203ENST00000566078 DISC1Q9NRI5 854 aa34.43■■■■□ 3.1
CTCF-203ENST00000566078 CCDC39Q9UFE4 941 aa34.43■■■■□ 3.1
CTCF-203ENST00000566078 VAV3Q9UKW4 847 aa34.43■■■■□ 3.1
CTCF-203ENST00000566078 WDR81Q562E7 1941 aa34.42■■■■□ 3.1
CTCF-203ENST00000566078 DOCK3Q8IZD9 2030 aa34.42■■■■□ 3.1
CTCF-203ENST00000566078 SPIRE1Q08AE8 756 aa34.42■■■■□ 3.1
CTCF-203ENST00000566078 RBM43Q6ZSC3 357 aaKnown RBP34.42■■■■□ 3.1
CTCF-203ENST00000566078 ZFYVE28Q9HCC9 887 aa34.42■■■■□ 3.1
CTCF-203ENST00000566078 STAM2O75886 525 aa34.41■■■■□ 3.1
CTCF-203ENST00000566078 E2F4Q16254 413 aa34.41■■■■□ 3.1
CTCF-203ENST00000566078 NCAPH2Q6IBW4 605 aa34.41■■■■□ 3.1
CTCF-203ENST00000566078 NLRX1Q86UT6 975 aa34.41■■■■□ 3.1
CTCF-203ENST00000566078 IQUBQ8NA54 791 aa34.41■■■■□ 3.1
CTCF-203ENST00000566078 SNX29Q8TEQ0 813 aa34.41■■■■□ 3.1
CTCF-203ENST00000566078 AGO4Q9HCK5 861 aaKnown RBP34.41■■■■□ 3.1
CTCF-203ENST00000566078 PKD2L1Q9P0L9 805 aa34.41■■■■□ 3.1
CTCF-203ENST00000566078 IVNS1ABPQ9Y6Y0 642 aa34.41■■■■□ 3.1
CTCF-203ENST00000566078 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP34.41■■■■□ 3.1
CTCF-203ENST00000566078 IPO5O00410 1097 aaKnown RBP34.41■■■■□ 3.1
CTCF-203ENST00000566078 GAS7O60861 476 aa34.41■■■■□ 3.1
CTCF-203ENST00000566078 AOC2O75106 756 aa34.41■■■■□ 3.1
CTCF-203ENST00000566078 PSMD10O75832 226 aa34.41■■■■□ 3.1
CTCF-203ENST00000566078 KRT79Q5XKE5 535 aa34.41■■■■□ 3.1
CTCF-203ENST00000566078 USP25Q9UHP3 1055 aa34.41■■■■□ 3.1
CTCF-203ENST00000566078 TLR2O60603 784 aa34.4■■■■□ 3.1
CTCF-203ENST00000566078 MAPK4P31152 587 aa34.4■■■■□ 3.1
CTCF-203ENST00000566078 STAT6P42226 847 aa34.4■■■■□ 3.1
CTCF-203ENST00000566078 STXBP2Q15833 593 aa34.4■■■■□ 3.1
CTCF-203ENST00000566078 GPR142Q7Z601 462 aa34.4■■■■□ 3.1
CTCF-203ENST00000566078 CEP57L1Q8IYX8 460 aa34.4■■■■□ 3.1
CTCF-203ENST00000566078 GPRASP2Q96D09 838 aa34.4■■■■□ 3.1
CTCF-203ENST00000566078 CALML4Q96GE6 196 aa34.4■■■■□ 3.1
CTCF-203ENST00000566078 FGD4Q96M96 766 aa34.4■■■■□ 3.1
CTCF-203ENST00000566078 INPP4AQ96PE3 977 aaPredicted RBP34.4■■■■□ 3.1
CTCF-203ENST00000566078 TEKT3Q9BXF9 490 aa34.4■■■■□ 3.1
CTCF-203ENST00000566078 RRAGBQ5VZM2 374 aa34.39■■■■□ 3.1
CTCF-203ENST00000566078 PLIN2Q99541 437 aa34.39■■■■□ 3.1
CTCF-203ENST00000566078 MPHOSPH6Q99547 160 aaKnown RBP34.39■■■■□ 3.1
CTCF-203ENST00000566078 SLFN14P0C7P3 912 aa34.38■■■■□ 3.09
CTCF-203ENST00000566078 EDNRBP24530 442 aa34.38■■■■□ 3.09
CTCF-203ENST00000566078 ADORA2AP29274 412 aa34.38■■■■□ 3.09
CTCF-203ENST00000566078 PDE4DQ08499 809 aa34.38■■■■□ 3.09
CTCF-203ENST00000566078 CRHR2Q13324 411 aa34.38■■■■□ 3.09
CTCF-203ENST00000566078 LRSAM1Q6UWE0 723 aa34.38■■■■□ 3.09
CTCF-203ENST00000566078 ABRAQ8N0Z2 381 aa34.38■■■■□ 3.09
CTCF-203ENST00000566078 RIT2Q99578 217 aa34.38■■■■□ 3.09
CTCF-203ENST00000566078 B4DLN1 442 aa34.37■■■■□ 3.09
CTCF-203ENST00000566078 STRNO43815 780 aa34.37■■■■□ 3.09
CTCF-203ENST00000566078 PLCG1P19174 1290 aa34.37■■■■□ 3.09
CTCF-203ENST00000566078 GNPTABQ3T906 1256 aa34.37■■■■□ 3.09
CTCF-203ENST00000566078 C17orf99Q6UX52 265 aa34.37■■■■□ 3.09
CTCF-203ENST00000566078 PLEKHH3Q7Z736 793 aa34.37■■■■□ 3.09
CTCF-203ENST00000566078 NUDT12Q9BQG2 462 aa34.37■■■■□ 3.09
CTCF-203ENST00000566078 EIF3JO75822 258 aaKnown RBP34.37■■■■□ 3.09
CTCF-203ENST00000566078 RGS20O76081 388 aa34.37■■■■□ 3.09
CTCF-203ENST00000566078 ITGB3BPQ13352 177 aaPredicted RBP34.37■■■■□ 3.09
CTCF-203ENST00000566078 PPP2R5CQ13362 524 aa34.37■■■■□ 3.09
CTCF-203ENST00000566078 KANK3Q6NY19 840 aa34.37■■■■□ 3.09
CTCF-203ENST00000566078 OTOP1Q7RTM1 612 aa34.37■■■■□ 3.09
CTCF-203ENST00000566078 ERCC4Q92889 916 aaPredicted RBP34.37■■■■□ 3.09
CTCF-203ENST00000566078 CDK5RAP3Q96JB5 506 aa34.37■■■■□ 3.09
CTCF-203ENST00000566078 HOOK1Q9UJC3 728 aaKnown RBP34.37■■■■□ 3.09
CTCF-203ENST00000566078 PDXDC2PQ6P474 469 aa34.36■■■■□ 3.09
CTCF-203ENST00000566078 ELOA2Q8IYF1 753 aaPredicted RBP34.36■■■■□ 3.09
CTCF-203ENST00000566078 ERMNQ8TAM6 284 aa34.36■■■■□ 3.09
CTCF-203ENST00000566078 CCDC34Q96HJ3 373 aa34.36■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms