RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 FOSL2P15408 326 aa18.07■□□□□ 0.48
USB1-208ENST00000563207 NEK4P51957 841 aa18.07■□□□□ 0.48
USB1-208ENST00000563207 TOB2Q14106 344 aaPredicted RBP18.07■□□□□ 0.48
USB1-208ENST00000563207 STXBP2Q15833 593 aa18.07■□□□□ 0.48
USB1-208ENST00000563207 USP38Q8NB14 1042 aa18.07■□□□□ 0.48
USB1-208ENST00000563207 GPKOWQ92917 476 aaPredicted RBP eCLIP18.07■□□□□ 0.48
USB1-208ENST00000563207 ZNF274Q96GC6 653 aaPredicted RBP18.07■□□□□ 0.48
USB1-208ENST00000563207 CTAGE1Q96RT6 745 aa18.07■□□□□ 0.48
USB1-208ENST00000563207 MPHOSPH6Q99547 160 aaKnown RBP18.07■□□□□ 0.48
USB1-208ENST00000563207 BCAS3Q9H6U6 928 aa18.07■□□□□ 0.48
USB1-208ENST00000563207 RIOX1Q9H6W3 641 aa18.07■□□□□ 0.48
USB1-208ENST00000563207 DDX41Q9UJV9 622 aaKnown RBP18.07■□□□□ 0.48
USB1-208ENST00000563207 BRPF3Q9ULD4 1205 aa18.07■□□□□ 0.48
USB1-208ENST00000563207 VCANP13611 3396 aa18.07■□□□□ 0.48
USB1-208ENST00000563207 TRIP12Q14669 1992 aaPredicted RBP18.06■□□□□ 0.48
USB1-208ENST00000563207 MMP3P08254 477 aa18.06■□□□□ 0.48
USB1-208ENST00000563207 APOBRQ0VD83 1088 aa18.06■□□□□ 0.48
USB1-208ENST00000563207 RABEP1Q15276 862 aa18.06■□□□□ 0.48
USB1-208ENST00000563207 MICU3Q86XE3 530 aa18.06■□□□□ 0.48
USB1-208ENST00000563207 IWS1Q96ST2 819 aa18.06■□□□□ 0.48
USB1-208ENST00000563207 KIF2CQ99661 725 aa18.06■□□□□ 0.48
USB1-208ENST00000563207 COL25A1Q9BXS0 654 aaPredicted RBP18.06■□□□□ 0.48
USB1-208ENST00000563207 NKX2-4Q9H2Z4 354 aa18.06■□□□□ 0.48
USB1-208ENST00000563207 NID2Q14112 1375 aa18.05■□□□□ 0.48
USB1-208ENST00000563207 B4DLN1 442 aa18.05■□□□□ 0.48
USB1-208ENST00000563207 GH1P01241 217 aa18.05■□□□□ 0.48
USB1-208ENST00000563207 MRPL12P52815 198 aaKnown RBP18.05■□□□□ 0.48
USB1-208ENST00000563207 SP2Q02086 613 aa18.05■□□□□ 0.48
USB1-208ENST00000563207 TRAF1Q13077 416 aa18.05■□□□□ 0.48
USB1-208ENST00000563207 RTN1Q16799 776 aa18.05■□□□□ 0.48
USB1-208ENST00000563207 NFRKBQ6P4R8 1299 aa18.05■□□□□ 0.48
USB1-208ENST00000563207 PDCD2LQ9BRP1 358 aa18.05■□□□□ 0.48
USB1-208ENST00000563207 SPZ1Q9BXG8 430 aa18.05■□□□□ 0.48
USB1-208ENST00000563207 PRDM12Q9H4Q4 367 aa18.05■□□□□ 0.48
USB1-208ENST00000563207 TET1Q8NFU7 2136 aa18.04■□□□□ 0.48
USB1-208ENST00000563207 TANC1Q9C0D5 1861 aa18.04■□□□□ 0.48
USB1-208ENST00000563207 DOCK5Q9H7D0 1870 aa18.04■□□□□ 0.48
USB1-208ENST00000563207 GOLGA8BA8MQT2 603 aa18.04■□□□□ 0.48
USB1-208ENST00000563207 METAP2P50579 478 aaKnown RBP eCLIP18.04■□□□□ 0.48
USB1-208ENST00000563207 GHRHRQ02643 423 aa18.04■□□□□ 0.48
USB1-208ENST00000563207 HIC1Q14526 733 aa18.04■□□□□ 0.48
USB1-208ENST00000563207 GDF6Q6KF10 455 aaPredicted RBP18.04■□□□□ 0.48
USB1-208ENST00000563207 FCHSD1Q86WN1 690 aa18.04■□□□□ 0.48
USB1-208ENST00000563207 SEZ6LQ9BYH1 1024 aa18.04■□□□□ 0.48
USB1-208ENST00000563207 PRDM6Q9NQX0 595 aa18.04■□□□□ 0.48
USB1-208ENST00000563207 NAP1L2Q9ULW6 460 aaPredicted RBP18.04■□□□□ 0.48
USB1-208ENST00000563207 TMEM265A0A087WTH1 108 aa18.03■□□□□ 0.48
USB1-208ENST00000563207 GOLGA8AA7E2F4 631 aa18.03■□□□□ 0.48
USB1-208ENST00000563207 KPNA6O60684 536 aa18.03■□□□□ 0.48
USB1-208ENST00000563207 EIF3JO75822 258 aaKnown RBP18.03■□□□□ 0.48
USB1-208ENST00000563207 IQCF3P0C7M6 154 aa18.03■□□□□ 0.48
USB1-208ENST00000563207 SUPT20HL2P0C7V6 817 aa18.03■□□□□ 0.48
USB1-208ENST00000563207 ZNF286BP0CG31 522 aa18.03■□□□□ 0.48
USB1-208ENST00000563207 PDIA3P30101 505 aaKnown RBP18.03■□□□□ 0.48
USB1-208ENST00000563207 ADGRE1Q14246 886 aa18.03■□□□□ 0.48
USB1-208ENST00000563207 GPNMBQ14956 572 aa18.03■□□□□ 0.48
USB1-208ENST00000563207 PGM5Q15124 567 aa18.03■□□□□ 0.48
USB1-208ENST00000563207 BRDTQ58F21 947 aaPredicted RBP18.03■□□□□ 0.48
USB1-208ENST00000563207 TMTC3Q6ZXV5 915 aa18.03■□□□□ 0.48
USB1-208ENST00000563207 RAB11FIP4Q86YS3 637 aa18.03■□□□□ 0.48
USB1-208ENST00000563207 CMTR1Q8N1G2 835 aaKnown RBP18.03■□□□□ 0.48
USB1-208ENST00000563207 DHX38Q92620 1227 aaKnown RBP18.03■□□□□ 0.48
USB1-208ENST00000563207 MAF1Q9H063 256 aa18.03■□□□□ 0.48
USB1-208ENST00000563207 TELO2Q9Y4R8 837 aa18.03■□□□□ 0.48
USB1-208ENST00000563207 MRVI1Q9Y6F6 885 aa18.03■□□□□ 0.48
USB1-208ENST00000563207 PTPRSQ13332 1948 aa18.03■□□□□ 0.48
USB1-208ENST00000563207 ZBBXA8MT70 800 aa18.02■□□□□ 0.48
USB1-208ENST00000563207 RXRAP19793 462 aa18.02■□□□□ 0.48
USB1-208ENST00000563207 AK2P54819 239 aa18.02■□□□□ 0.48
USB1-208ENST00000563207 ZNF200P98182 395 aaPredicted RBP18.02■□□□□ 0.48
USB1-208ENST00000563207 PTGISQ16647 500 aa18.02■□□□□ 0.48
USB1-208ENST00000563207 VSIG10LQ86VR7 867 aa18.02■□□□□ 0.48
USB1-208ENST00000563207 ALG1Q9BT22 464 aa18.02■□□□□ 0.48
USB1-208ENST00000563207 PNMA6FA0A0J9YX94 578 aa18.01■□□□□ 0.47
USB1-208ENST00000563207 ST18O60284 1047 aa18.01■□□□□ 0.47
USB1-208ENST00000563207 PLEKHA8P1O95397 391 aa18.01■□□□□ 0.47
USB1-208ENST00000563207 TCTN1Q2MV58 587 aa18.01■□□□□ 0.47
USB1-208ENST00000563207 HSDL1Q3SXM5 330 aa18.01■□□□□ 0.47
USB1-208ENST00000563207 DHX37Q8IY37 1157 aaKnown RBP18.01■□□□□ 0.47
USB1-208ENST00000563207 RPUSD2Q8IZ73 545 aaKnown RBP18.01■□□□□ 0.47
USB1-208ENST00000563207 SRBD1Q8N5C6 995 aaKnown RBP18.01■□□□□ 0.47
USB1-208ENST00000563207 PPM1EQ8WY54 764 aa18.01■□□□□ 0.47
USB1-208ENST00000563207 WNT8BQ93098 351 aa18.01■□□□□ 0.47
USB1-208ENST00000563207 RRP36Q96EU6 259 aaKnown RBP18.01■□□□□ 0.47
USB1-208ENST00000563207 HDAC6Q9UBN7 1215 aa18.01■□□□□ 0.47
USB1-208ENST00000563207 SLC4A7Q9Y6M7 1214 aa18.01■□□□□ 0.47
USB1-208ENST00000563207 GCOM1H8Y6P7 765 aaPredicted RBP18■□□□□ 0.47
USB1-208ENST00000563207 ARHGEF15O94989 841 aa18■□□□□ 0.47
USB1-208ENST00000563207 POLR2MP0CAP2 368 aa18■□□□□ 0.47
USB1-208ENST00000563207 PSEN2P49810 448 aa18■□□□□ 0.47
USB1-208ENST00000563207 MRPS9P82933 396 aaKnown RBP18■□□□□ 0.47
USB1-208ENST00000563207 MYSM1Q5VVJ2 828 aa18■□□□□ 0.47
USB1-208ENST00000563207 CPLX2Q6PUV4 134 aaKnown RBP18■□□□□ 0.47
USB1-208ENST00000563207 TMCO2Q7Z6W1 182 aaPredicted RBP18■□□□□ 0.47
USB1-208ENST00000563207 FAM217BQ9NTX9 383 aaPredicted RBP18■□□□□ 0.47
USB1-208ENST00000563207 SEC63Q9UGP8 760 aaKnown RBP18■□□□□ 0.47
USB1-208ENST00000563207 MSRAQ9UJ68 235 aa18■□□□□ 0.47
USB1-208ENST00000563207 SPTBN5Q9NRC6 3674 aaKnown RBP18■□□□□ 0.47
USB1-208ENST00000563207 hCG_1642624A0A1W2PR95 340 aa17.99■□□□□ 0.47
USB1-208ENST00000563207 PFKFB2O60825 505 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms