RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 PANK4Q9NVE7 773 aa11.76□□□□□ -0.53
TPM1-210ENST00000558264 CHMP2AO43633 222 aa11.76□□□□□ -0.53
TPM1-210ENST00000558264 KRT18P05783 430 aaKnown RBP11.76□□□□□ -0.53
TPM1-210ENST00000558264 ZNF76P36508 570 aa11.76□□□□□ -0.53
TPM1-210ENST00000558264 CXCL9Q07325 125 aa11.76□□□□□ -0.53
TPM1-210ENST00000558264 PABPC4Q13310 644 aaKnown RBP eCLIP11.76□□□□□ -0.531e-6■□□□□ 11.2
TPM1-210ENST00000558264 SF3B2Q13435 895 aaKnown RBP11.76□□□□□ -0.53
TPM1-210ENST00000558264 SPDYE2Q495Y8 402 aa11.76□□□□□ -0.53
TPM1-210ENST00000558264 LENG9Q96B70 501 aa11.76□□□□□ -0.53
TPM1-210ENST00000558264 NAA15Q9BXJ9 866 aaKnown RBP11.76□□□□□ -0.53
TPM1-210ENST00000558264 HERC5Q9UII4 1024 aaKnown RBP11.76□□□□□ -0.53
TPM1-210ENST00000558264 LUC7L2Q9Y383 392 aaKnown RBP11.76□□□□□ -0.53
TPM1-210ENST00000558264 USP11P51784 963 aa11.75□□□□□ -0.53
TPM1-210ENST00000558264 CBX1P83916 185 aa11.75□□□□□ -0.53
TPM1-210ENST00000558264 ZNF569Q5MCW4 686 aa11.75□□□□□ -0.53
TPM1-210ENST00000558264 CENPPQ6IPU0 288 aa11.75□□□□□ -0.53
TPM1-210ENST00000558264 FBXO38Q6PIJ6 1188 aa11.75□□□□□ -0.53
TPM1-210ENST00000558264 CYP26C1Q6V0L0 522 aa11.75□□□□□ -0.53
TPM1-210ENST00000558264 CATSPER3Q86XQ3 398 aa11.75□□□□□ -0.53
TPM1-210ENST00000558264 MNS1Q8NEH6 495 aa11.75□□□□□ -0.53
TPM1-210ENST00000558264 ETNPPLQ8TBG4 499 aa11.75□□□□□ -0.53
TPM1-210ENST00000558264 FAM207AQ9NSI2 230 aaPredicted RBP11.75□□□□□ -0.53
TPM1-210ENST00000558264 PVALEFA0A1B0GWK0 134 aa11.75□□□□□ -0.53
TPM1-210ENST00000558264 EPHB6O15197 1021 aa11.75□□□□□ -0.53
TPM1-210ENST00000558264 DNM2P50570 870 aa11.75□□□□□ -0.53
TPM1-210ENST00000558264 AP3B2Q13367 1082 aa11.75□□□□□ -0.53
TPM1-210ENST00000558264 ARHGAP29Q52LW3 1261 aa11.75□□□□□ -0.53
TPM1-210ENST00000558264 MTERF4Q7Z6M4 381 aaKnown RBP11.75□□□□□ -0.53
TPM1-210ENST00000558264 PSMD1Q99460 953 aa11.75□□□□□ -0.53
TPM1-210ENST00000558264 GOLGA6L9A6NEM1 432 aa11.74□□□□□ -0.53
TPM1-210ENST00000558264 WNT10BO00744 389 aa11.74□□□□□ -0.53
TPM1-210ENST00000558264 MSH4O15457 936 aa11.74□□□□□ -0.53
TPM1-210ENST00000558264 SPIRE1Q08AE8 756 aa11.74□□□□□ -0.53
TPM1-210ENST00000558264 HERC4Q5GLZ8 1057 aaPredicted RBP11.74□□□□□ -0.53
TPM1-210ENST00000558264 FAM26FQ5R3K3 315 aa11.74□□□□□ -0.53
TPM1-210ENST00000558264 WDR59Q6PJI9 974 aa11.74□□□□□ -0.53
TPM1-210ENST00000558264 TMTC1Q8IUR5 882 aa11.74□□□□□ -0.53
TPM1-210ENST00000558264 OR8K1Q8NGG5 319 aa11.74□□□□□ -0.53
TPM1-210ENST00000558264 CRYGNQ8WXF5 182 aa11.74□□□□□ -0.53
TPM1-210ENST00000558264 CCDC51Q96ER9 411 aa11.74□□□□□ -0.53
TPM1-210ENST00000558264 RGL1Q9NZL6 768 aa11.74□□□□□ -0.53
TPM1-210ENST00000558264 ZNRF3Q9ULT6 936 aa11.74□□□□□ -0.53
TPM1-210ENST00000558264 TMX2Q9Y320 296 aa11.74□□□□□ -0.53
TPM1-210ENST00000558264 REXO2Q9Y3B8 237 aaKnown RBP11.74□□□□□ -0.53
TPM1-210ENST00000558264 ASTN2O75129 1339 aaPredicted RBP11.74□□□□□ -0.53
TPM1-210ENST00000558264 CYP11B2P19099 503 aa11.74□□□□□ -0.53
TPM1-210ENST00000558264 SREBF1P36956 1147 aa11.74□□□□□ -0.53
TPM1-210ENST00000558264 BAG6P46379 1132 aa11.74□□□□□ -0.53
TPM1-210ENST00000558264 TRIM14Q14142 442 aa11.74□□□□□ -0.53
TPM1-210ENST00000558264 NOC3LQ8WTT2 800 aaKnown RBP11.74□□□□□ -0.53
TPM1-210ENST00000558264 TANGO6Q9C0B7 1094 aa11.74□□□□□ -0.53
TPM1-210ENST00000558264 GOPCQ9HD26 462 aa11.74□□□□□ -0.53
TPM1-210ENST00000558264 KDM3AQ9Y4C1 1321 aa11.74□□□□□ -0.53
TPM1-210ENST00000558264 CYP3A7-CYP3A51PA0A087WV96 503 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 A0A1W2PQC6 194 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 EML1O00423 815 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 CYP3A7P24462 503 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 CASP5P51878 434 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 EHHADHQ08426 723 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 ARSHQ5FYA8 562 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 FAM114A1Q8IWE2 563 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 MYOCDQ8IZQ8 938 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 SLC35F6Q8N357 371 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 GUF1Q8N442 669 aaKnown RBP11.73□□□□□ -0.53
TPM1-210ENST00000558264 FEZ1Q99689 392 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 CCDC94Q9BW85 323 aaPredicted RBP11.73□□□□□ -0.53
TPM1-210ENST00000558264 NT5C3AQ9H0P0 336 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 GLT8D2Q9H1C3 349 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 MMRN2Q9H8L6 949 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 PKD2L1Q9P0L9 805 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 CAPN11Q9UMQ6 739 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 GUCA1BQ9UMX6 200 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 RSPH10B2B2RC85 870 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 TRAF5O00463 557 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 ZBTB39O15060 712 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 KIF5CO60282 957 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 NDUFA10O95299 355 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 PLEKP08567 350 aaPredicted RBP11.73□□□□□ -0.53
TPM1-210ENST00000558264 RSPH10BP0C881 870 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 SPATA31C1P0DKV0 1188 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 APBA1Q02410 837 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 BTNL9Q6UXG8 535 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 LRRC55Q6ZSA7 311 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 SLFN12Q8IYM2 578 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 PIGOQ8TEQ8 1089 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 SMCR8Q8TEV9 937 aaPredicted RBP11.73□□□□□ -0.53
TPM1-210ENST00000558264 WDR18Q9BV38 432 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 BMP2KQ9NSY1 1161 aaPredicted RBP11.73□□□□□ -0.53
TPM1-210ENST00000558264 EPN1Q9Y6I3 576 aaPredicted RBP11.73□□□□□ -0.53
TPM1-210ENST00000558264 FECHP22830 423 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 ARHGAP25P42331 645 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 CYP27A1Q02318 531 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 CTTNQ14247 550 aaKnown RBP11.73□□□□□ -0.53
TPM1-210ENST00000558264 VWA3BQ502W6 1294 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 FKBP15Q5T1M5 1219 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 MBOAT7Q96N66 472 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 ZNF341Q9BYN7 854 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 TTYH3Q9C0H2 523 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 NDST4Q9H3R1 872 aa11.73□□□□□ -0.53
TPM1-210ENST00000558264 PUF60Q9UHX1 559 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms