RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 FEM1BQ9UK73 627 aa11.6□□□□□ -0.55
HNRNPC-228ENST00000557033 ZNF214Q9UL59 606 aaPredicted RBP11.6□□□□□ -0.55
HNRNPC-228ENST00000557033 DIS3Q9Y2L1 958 aaKnown RBP11.6□□□□□ -0.55
HNRNPC-228ENST00000557033 ZNF236Q9UL36 1845 aa11.6□□□□□ -0.55
HNRNPC-228ENST00000557033 TSPY2A6NKD2 308 aa11.59□□□□□ -0.55
HNRNPC-228ENST00000557033 ATP2A1O14983 1001 aa11.59□□□□□ -0.55
HNRNPC-228ENST00000557033 LILRA1O75019 489 aa11.59□□□□□ -0.55
HNRNPC-228ENST00000557033 COBLO75128 1261 aa11.59□□□□□ -0.55
HNRNPC-228ENST00000557033 ZBED4O75132 1171 aa11.59□□□□□ -0.55
HNRNPC-228ENST00000557033 FGAP02671 866 aa11.59□□□□□ -0.55
HNRNPC-228ENST00000557033 KCTD2Q14681 263 aa11.59□□□□□ -0.55
HNRNPC-228ENST00000557033 C11orf91Q3C1V1 193 aa11.59□□□□□ -0.55
HNRNPC-228ENST00000557033 FAM47AQ5JRC9 791 aa11.59□□□□□ -0.55
HNRNPC-228ENST00000557033 ETFBKMTQ8IXQ9 262 aa11.59□□□□□ -0.55
HNRNPC-228ENST00000557033 REPS2Q8NFH8 660 aa11.59□□□□□ -0.55
HNRNPC-228ENST00000557033 RILPL2Q969X0 211 aa11.59□□□□□ -0.55
HNRNPC-228ENST00000557033 FAM227BQ96M60 508 aa11.59□□□□□ -0.55
HNRNPC-228ENST00000557033 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.59□□□□□ -0.55
HNRNPC-228ENST00000557033 MYH4Q9Y623 1939 aa11.58□□□□□ -0.55
HNRNPC-228ENST00000557033 ORC4O43929 436 aa11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 HSPD1P10809 573 aaKnown RBP11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 PCP11498 1178 aaKnown RBP11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 BMP3P12645 472 aa11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 SDSP20132 328 aa11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 CYP2C19P33261 490 aa11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 NOVP48745 357 aa11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 OAZ1P54368 228 aa11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 ZNF394Q53GI3 561 aa11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 VPS53Q5VIR6 699 aa11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 SLFN13Q68D06 897 aa11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 DIS3LQ8TF46 1054 aaKnown RBP11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 GMCL1Q96IK5 515 aa11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 MAML3Q96JK9 1138 aa11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 CDK15Q96Q40 435 aa11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 MMP19Q99542 508 aa11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 NUP88Q99567 741 aaPredicted RBP11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 TEX13BQ9BXU2 312 aa11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 SRA1Q9HD15 236 aaKnown RBP11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 DDX20Q9UHI6 824 aaKnown RBP11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 NRBP1Q9UHY1 535 aa11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 ZNFX1Q9P2E3 1918 aaKnown RBP11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 COL11A1P12107 1806 aaPredicted RBP11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 ZMYM6O95789 1325 aa11.58□□□□□ -0.56
HNRNPC-228ENST00000557033 A0A0D9SFI3 127 aa11.57□□□□□ -0.56
HNRNPC-228ENST00000557033 HIP1O00291 1037 aa11.57□□□□□ -0.56
HNRNPC-228ENST00000557033 PLA2G6O60733 806 aa11.57□□□□□ -0.56
HNRNPC-228ENST00000557033 COL6A1P12109 1028 aa11.57□□□□□ -0.56
HNRNPC-228ENST00000557033 CYBAP13498 195 aa11.57□□□□□ -0.56
HNRNPC-228ENST00000557033 CNGA1P29973 690 aa11.57□□□□□ -0.56
HNRNPC-228ENST00000557033 GRM5P41594 1212 aa11.57□□□□□ -0.56
HNRNPC-228ENST00000557033 NT5C2P49902 561 aa11.57□□□□□ -0.56
HNRNPC-228ENST00000557033 SKOR1P84550 965 aa11.57□□□□□ -0.56
HNRNPC-228ENST00000557033 NMIQ13287 307 aaPredicted RBP11.57□□□□□ -0.56
HNRNPC-228ENST00000557033 CHURC1Q8WUH1 139 aa11.57□□□□□ -0.56
HNRNPC-228ENST00000557033 PIF1Q9H611 641 aa11.57□□□□□ -0.56
HNRNPC-228ENST00000557033 SLC38A10Q9HBR0 1119 aa11.57□□□□□ -0.56
HNRNPC-228ENST00000557033 IL17RBQ9NRM6 502 aa11.57□□□□□ -0.56
HNRNPC-228ENST00000557033 STX8Q9UNK0 236 aa11.57□□□□□ -0.56
HNRNPC-228ENST00000557033 CTDP1Q9Y5B0 961 aaPredicted RBP11.57□□□□□ -0.56
HNRNPC-228ENST00000557033 USP3Q9Y6I4 520 aa11.57□□□□□ -0.56
HNRNPC-228ENST00000557033 CCDC171Q6TFL3 1326 aa11.57□□□□□ -0.56
HNRNPC-228ENST00000557033 EIF1AYO14602 144 aaKnown RBP11.56□□□□□ -0.56
HNRNPC-228ENST00000557033 SEPT4O43236 478 aa11.56□□□□□ -0.56
HNRNPC-228ENST00000557033 RANBP6O60518 1105 aaKnown RBP11.56□□□□□ -0.56
HNRNPC-228ENST00000557033 ADD1P35611 737 aaKnown RBP11.56□□□□□ -0.56
HNRNPC-228ENST00000557033 SLC1A4P43007 532 aa11.56□□□□□ -0.56
HNRNPC-228ENST00000557033 ARID5BQ14865 1188 aa11.56□□□□□ -0.56
HNRNPC-228ENST00000557033 ZNF792Q3KQV3 632 aa11.56□□□□□ -0.56
HNRNPC-228ENST00000557033 SNRNP48Q6IEG0 339 aaKnown RBP11.56□□□□□ -0.56
HNRNPC-228ENST00000557033 RCSD1Q6JBY9 416 aa11.56□□□□□ -0.56
HNRNPC-228ENST00000557033 PPP1R18Q6NYC8 613 aa11.56□□□□□ -0.56
HNRNPC-228ENST00000557033 FAM160B2Q86V87 743 aa11.56□□□□□ -0.56
HNRNPC-228ENST00000557033 LRRC47Q8N1G4 583 aaKnown RBP11.56□□□□□ -0.56
HNRNPC-228ENST00000557033 MSL3Q8N5Y2 521 aaKnown RBP11.56□□□□□ -0.56
HNRNPC-228ENST00000557033 ARRDC4Q8NCT1 418 aa11.56□□□□□ -0.56
HNRNPC-228ENST00000557033 TRPV1Q8NER1 839 aa11.56□□□□□ -0.56
HNRNPC-228ENST00000557033 STAG1Q8WVM7 1258 aa11.56□□□□□ -0.56
HNRNPC-228ENST00000557033 KIFC2Q96AC6 838 aa11.56□□□□□ -0.56
HNRNPC-228ENST00000557033 INCENPQ9NQS7 918 aa11.56□□□□□ -0.56
HNRNPC-228ENST00000557033 TCP11L1Q9NUJ3 509 aa11.56□□□□□ -0.56
HNRNPC-228ENST00000557033 FBXO40Q9UH90 709 aa11.56□□□□□ -0.56
HNRNPC-228ENST00000557033 TMEM232C9JQI7 657 aa11.55□□□□□ -0.56
HNRNPC-228ENST00000557033 EML1O00423 815 aa11.55□□□□□ -0.56
HNRNPC-228ENST00000557033 DNM1LO00429 736 aa11.55□□□□□ -0.56
HNRNPC-228ENST00000557033 STAT2P52630 851 aa11.55□□□□□ -0.56
HNRNPC-228ENST00000557033 WNT7BP56706 349 aa11.55□□□□□ -0.56
HNRNPC-228ENST00000557033 ORC1Q13415 861 aa11.55□□□□□ -0.56
HNRNPC-228ENST00000557033 ZNF589Q86UQ0 364 aaPredicted RBP11.55□□□□□ -0.56
HNRNPC-228ENST00000557033 CPXCR1Q8N123 301 aa11.55□□□□□ -0.56
HNRNPC-228ENST00000557033 CHST13Q8NET6 341 aa11.55□□□□□ -0.56
HNRNPC-228ENST00000557033 DDX11Q96FC9 970 aa11.55□□□□□ -0.56
HNRNPC-228ENST00000557033 TTC14Q96N46 770 aa11.55□□□□□ -0.56
HNRNPC-228ENST00000557033 DNAJC25Q9H1X3 360 aa11.55□□□□□ -0.56
HNRNPC-228ENST00000557033 RIPK3Q9Y572 518 aa11.55□□□□□ -0.56
HNRNPC-228ENST00000557033 PCDHGB7Q9Y5F8 929 aa11.55□□□□□ -0.56
HNRNPC-228ENST00000557033 DNAJC25-GNG10A0A024R161 153 aa11.54□□□□□ -0.56
HNRNPC-228ENST00000557033 SERTM1A2A2V5 107 aa11.54□□□□□ -0.56
HNRNPC-228ENST00000557033 ZNF213O14771 459 aa11.54□□□□□ -0.56
HNRNPC-228ENST00000557033 PGK2P07205 417 aa11.54□□□□□ -0.56
HNRNPC-228ENST00000557033 MCCP23508 829 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms