RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 MRPS9P82933 396 aaKnown RBP15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 SMAD3P84022 425 aaKnown RBP15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 FUT2Q10981 343 aa15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 SESTD1Q86VW0 696 aa15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 RPUSD2Q8IZ73 545 aaKnown RBP15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 GIMAP8Q8ND71 665 aaPredicted RBP15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 CDHR1Q96JP9 859 aa15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 SENP7Q9BQF6 1050 aa15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 USP26Q9BXU7 913 aa15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 MLXIPQ9HAP2 919 aa15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 V9GY48 417 aaPredicted RBP15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 GGPS1O95749 300 aa15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 FOSP01100 380 aaPredicted RBP15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 CSF2RAP15509 400 aa15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 UBA1P22314 1058 aaKnown RBP15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 EPHB4P54760 987 aa15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 NLRX1Q86UT6 975 aa15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 BRF1Q92994 677 aa15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 SPATA33Q96N06 139 aa15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 MTIF3Q9H2K0 278 aaKnown RBP15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 IL23AQ9NPF7 189 aa15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 TRMT13Q9NUP7 481 aaKnown RBP15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 NAP1L2Q9ULW6 460 aaPredicted RBP15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 NOD1Q9Y239 953 aa15.11■□□□□ 0.01
HNRNPC-205ENST00000553300 hCG_1642624A0A1W2PR95 340 aa15.1■□□□□ 0.01
HNRNPC-205ENST00000553300 PITPNM1O00562 1244 aa15.1■□□□□ 0.01
HNRNPC-205ENST00000553300 MAFGO15525 162 aa15.1■□□□□ 0.01
HNRNPC-205ENST00000553300 CPA1P15085 419 aa15.1■□□□□ 0.01
HNRNPC-205ENST00000553300 NAPAP54920 295 aa15.1■□□□□ 0.01
HNRNPC-205ENST00000553300 SP2Q02086 613 aa15.1■□□□□ 0.01
HNRNPC-205ENST00000553300 APOBRQ0VD83 1088 aa15.1■□□□□ 0.01
HNRNPC-205ENST00000553300 BFSP2Q13515 415 aa15.1■□□□□ 0.01
HNRNPC-205ENST00000553300 METTL7BQ6UX53 244 aa15.1■□□□□ 0.01
HNRNPC-205ENST00000553300 RUFY3Q7L099 469 aa15.1■□□□□ 0.01
HNRNPC-205ENST00000553300 DEFB123Q8N688 67 aa15.1■□□□□ 0.01
HNRNPC-205ENST00000553300 KAT2BQ92831 832 aa15.1■□□□□ 0.01
HNRNPC-205ENST00000553300 GPRASP2Q96D09 838 aa15.1■□□□□ 0.01
HNRNPC-205ENST00000553300 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.1■□□□□ 0.012e-8■■■□□ 14.8
HNRNPC-205ENST00000553300 TM6SF1Q9BZW5 370 aa15.1■□□□□ 0.01
HNRNPC-205ENST00000553300 ZSWIM6Q9HCJ5 1215 aa15.1■□□□□ 0.01
HNRNPC-205ENST00000553300 RIC8AQ9NPQ8 531 aa15.1■□□□□ 0.01
HNRNPC-205ENST00000553300 FAM217BQ9NTX9 383 aaPredicted RBP15.1■□□□□ 0.01
HNRNPC-205ENST00000553300 NID2Q14112 1375 aa15.09■□□□□ 0.01
HNRNPC-205ENST00000553300 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.09■□□□□ 0.01
HNRNPC-205ENST00000553300 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.09■□□□□ 0.01
HNRNPC-205ENST00000553300 NOP56O00567 594 aaKnown RBP15.09■□□□□ 0.01
HNRNPC-205ENST00000553300 F2P00734 622 aa15.09■□□□□ 0.01
HNRNPC-205ENST00000553300 PFKMP08237 780 aa15.09■□□□□ 0.01
HNRNPC-205ENST00000553300 CDC27P30260 824 aa15.09■□□□□ 0.01
HNRNPC-205ENST00000553300 ADD1P35611 737 aaKnown RBP15.09■□□□□ 0.01
HNRNPC-205ENST00000553300 PSEN2P49810 448 aa15.09■□□□□ 0.01
HNRNPC-205ENST00000553300 EVCP57679 992 aa15.09■□□□□ 0.01
HNRNPC-205ENST00000553300 CHMP4BP1P59074 171 aa15.09■□□□□ 0.01
HNRNPC-205ENST00000553300 HSDL1Q3SXM5 330 aa15.09■□□□□ 0.01
HNRNPC-205ENST00000553300 TMEM240Q5SV17 173 aa15.09■□□□□ 0.01
HNRNPC-205ENST00000553300 WWC2Q6AWC2 1192 aa15.09■□□□□ 0.01
HNRNPC-205ENST00000553300 C16orf59Q7L2K0 433 aa15.09■□□□□ 0.01
HNRNPC-205ENST00000553300 CCDC155Q8N6L0 562 aa15.09■□□□□ 0.01
HNRNPC-205ENST00000553300 C7orf31Q8N865 590 aa15.09■□□□□ 0.01
HNRNPC-205ENST00000553300 GPKOWQ92917 476 aaPredicted RBP eCLIP15.09■□□□□ 0.015e-6■■□□□ 13.3
HNRNPC-205ENST00000553300 BARHL2Q9NY43 387 aa15.09■□□□□ 0.01
HNRNPC-205ENST00000553300 RTEL1Q9NZ71 1219 aa15.09■□□□□ 0.01
HNRNPC-205ENST00000553300 PCDHA6Q9UN73 950 aa15.09■□□□□ 0.01
HNRNPC-205ENST00000553300 PCDHA8Q9Y5H6 950 aa15.09■□□□□ 0.01
HNRNPC-205ENST00000553300 CYP46A1Q9Y6A2 500 aa15.09■□□□□ 0.01
HNRNPC-205ENST00000553300 HAS3O00219 553 aa15.08■□□□□ 0
HNRNPC-205ENST00000553300 FGBP02675 491 aa15.08■□□□□ 0
HNRNPC-205ENST00000553300 RFC2P35250 354 aa15.08■□□□□ 0
HNRNPC-205ENST00000553300 MFSD10Q14728 455 aa15.08■□□□□ 0
HNRNPC-205ENST00000553300 PTGISQ16647 500 aa15.08■□□□□ 0
HNRNPC-205ENST00000553300 KIAA0753Q2KHM9 967 aa15.08■□□□□ 0
HNRNPC-205ENST00000553300 MCTP2Q6DN12 878 aa15.08■□□□□ 0
HNRNPC-205ENST00000553300 ZNF365Q70YC5 407 aa15.08■□□□□ 0
HNRNPC-205ENST00000553300 RETREG2Q8NC44 543 aa15.08■□□□□ 0
HNRNPC-205ENST00000553300 CAGE1Q8TC20 777 aa15.08■□□□□ 0
HNRNPC-205ENST00000553300 CCDC12Q8WUD4 166 aaPredicted RBP15.08■□□□□ 0
HNRNPC-205ENST00000553300 ZFP91Q96JP5 570 aaPredicted RBP15.08■□□□□ 0
HNRNPC-205ENST00000553300 GTF2IRD1Q9UHL9 959 aa15.08■□□□□ 0
HNRNPC-205ENST00000553300 SMCO2A6NFE2 343 aa15.07■□□□□ 0
HNRNPC-205ENST00000553300 PRPF3O43395 683 aaKnown RBP15.07■□□□□ 0
HNRNPC-205ENST00000553300 PARNO95453 639 aaKnown RBP15.07■□□□□ 0
HNRNPC-205ENST00000553300 CYP2C9P11712 490 aa15.07■□□□□ 0
HNRNPC-205ENST00000553300 ADCY7P51828 1080 aa15.07■□□□□ 0
HNRNPC-205ENST00000553300 CCL23P55773 120 aa15.07■□□□□ 0
HNRNPC-205ENST00000553300 AKAP17AQ02040 695 aaKnown RBP15.07■□□□□ 0
HNRNPC-205ENST00000553300 AP3B2Q13367 1082 aa15.07■□□□□ 0
HNRNPC-205ENST00000553300 UBE2SQ16763 222 aa15.07■□□□□ 0
HNRNPC-205ENST00000553300 PFKFB3Q16875 520 aaPredicted RBP15.07■□□□□ 0
HNRNPC-205ENST00000553300 ZNF697Q5TEC3 545 aa15.07■□□□□ 0
HNRNPC-205ENST00000553300 RASIP1Q5U651 963 aa15.07■□□□□ 0
HNRNPC-205ENST00000553300 CYFIP1Q7L576 1253 aa15.07■□□□□ 0
HNRNPC-205ENST00000553300 HERVK_113Q902F9 699 aa15.07■□□□□ 0
HNRNPC-205ENST00000553300 WNT8AQ9H1J5 351 aa15.07■□□□□ 0
HNRNPC-205ENST00000553300 UMODL1Q5DID0 1318 aa15.06■□□□□ 0
HNRNPC-205ENST00000553300 TMEM265A0A087WTH1 108 aa15.06■□□□□ 0
HNRNPC-205ENST00000553300 STXBP3O00186 592 aa15.06■□□□□ 0
HNRNPC-205ENST00000553300 ZNF286BP0CG31 522 aa15.06■□□□□ 0
HNRNPC-205ENST00000553300 ACRP10323 421 aa15.06■□□□□ 0
HNRNPC-205ENST00000553300 SCG2P13521 617 aa15.06■□□□□ 0
HNRNPC-205ENST00000553300 SEMA3FQ13275 785 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms