RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 MAP3K19Q56UN5 1328 aa6.8□□□□□ -1.32
SCAF11-214ENST00000550893 CICQ96RK0 1608 aaPredicted RBP6.8□□□□□ -1.32
SCAF11-214ENST00000550893 OVOS2A0A0G2JMS6 1433 aa6.8□□□□□ -1.32
SCAF11-214ENST00000550893 FYB1O15117 783 aa6.8□□□□□ -1.32
SCAF11-214ENST00000550893 EIF6P56537 245 aaKnown RBP6.8□□□□□ -1.32
SCAF11-214ENST00000550893 CHRNEQ04844 493 aa6.8□□□□□ -1.32
SCAF11-214ENST00000550893 AXDND1Q5T1B0 1012 aaPredicted RBP6.8□□□□□ -1.32
SCAF11-214ENST00000550893 DCAF15Q66K64 600 aa6.8□□□□□ -1.32
SCAF11-214ENST00000550893 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.8□□□□□ -1.32
SCAF11-214ENST00000550893 SLC38A3Q99624 504 aa6.8□□□□□ -1.32
SCAF11-214ENST00000550893 TGIF2Q9GZN2 237 aa6.8□□□□□ -1.32
SCAF11-214ENST00000550893 FAM86C1Q9NVL1 165 aa6.8□□□□□ -1.32
SCAF11-214ENST00000550893 C5P01031 1676 aa6.8□□□□□ -1.32
SCAF11-214ENST00000550893 RTL1A6NKG5 1358 aa6.8□□□□□ -1.32
SCAF11-214ENST00000550893 LTBP3Q9NS15 1303 aa6.79□□□□□ -1.32
SCAF11-214ENST00000550893 COL5A3P25940 1745 aaPredicted RBP6.79□□□□□ -1.32
SCAF11-214ENST00000550893 NOTOA8MTQ0 251 aa6.79□□□□□ -1.32
SCAF11-214ENST00000550893 PSPNO60542 156 aa6.79□□□□□ -1.32
SCAF11-214ENST00000550893 USP2O75604 605 aaPredicted RBP6.79□□□□□ -1.32
SCAF11-214ENST00000550893 TP53P04637 393 aaPredicted RBP6.79□□□□□ -1.32
SCAF11-214ENST00000550893 HSPA5P11021 654 aaKnown RBP6.79□□□□□ -1.32
SCAF11-214ENST00000550893 GIPRP48546 466 aa6.79□□□□□ -1.32
SCAF11-214ENST00000550893 MARCH10Q8NA82 808 aaPredicted RBP6.79□□□□□ -1.32
SCAF11-214ENST00000550893 SMARCC1Q92922 1105 aaPredicted RBP6.79□□□□□ -1.32
SCAF11-214ENST00000550893 MAP6Q96JE9 813 aa6.79□□□□□ -1.32
SCAF11-214ENST00000550893 SRRTQ9BXP5 876 aaKnown RBP6.79□□□□□ -1.32
SCAF11-214ENST00000550893 KRTAP4-9Q9BYQ8 210 aa6.79□□□□□ -1.32
SCAF11-214ENST00000550893 PRR13Q9NZ81 148 aa6.79□□□□□ -1.32
SCAF11-214ENST00000550893 GPR160Q9UJ42 338 aa6.79□□□□□ -1.32
SCAF11-214ENST00000550893 ZNF214Q9UL59 606 aaPredicted RBP6.79□□□□□ -1.32
SCAF11-214ENST00000550893 SIPA1L3O60292 1781 aaPredicted RBP6.79□□□□□ -1.32
SCAF11-214ENST00000550893 UBR3Q6ZT12 1888 aa6.79□□□□□ -1.32
SCAF11-214ENST00000550893 SCN11AQ9UI33 1791 aa6.78□□□□□ -1.32
SCAF11-214ENST00000550893 EFEMP2O95967 443 aa6.78□□□□□ -1.32
SCAF11-214ENST00000550893 NASPP49321 788 aaPredicted RBP6.78□□□□□ -1.32
SCAF11-214ENST00000550893 GALK1P51570 392 aa6.78□□□□□ -1.32
SCAF11-214ENST00000550893 ANKRD39Q53RE8 183 aa6.78□□□□□ -1.32
SCAF11-214ENST00000550893 CRTC3Q6UUV7 619 aa6.78□□□□□ -1.32
SCAF11-214ENST00000550893 TCP11L2Q8N4U5 519 aa6.78□□□□□ -1.32
SCAF11-214ENST00000550893 ZNF428Q96B54 188 aa6.78□□□□□ -1.32
SCAF11-214ENST00000550893 SHISA4Q96DD7 197 aa6.78□□□□□ -1.32
SCAF11-214ENST00000550893 HHIPL1Q96JK4 782 aa6.78□□□□□ -1.32
SCAF11-214ENST00000550893 CAMKK2Q96RR4 588 aa6.78□□□□□ -1.32
SCAF11-214ENST00000550893 DSCC1Q9BVC3 393 aa6.78□□□□□ -1.32
SCAF11-214ENST00000550893 CCDC7Q96M83 1385 aa6.78□□□□□ -1.32
SCAF11-214ENST00000550893 TJP1Q07157 1748 aa6.77□□□□□ -1.33
SCAF11-214ENST00000550893 KIAA1551Q9HCM1 1747 aa6.77□□□□□ -1.33
SCAF11-214ENST00000550893 ZNF205O95201 554 aa6.77□□□□□ -1.33
SCAF11-214ENST00000550893 VAV1P15498 845 aa6.77□□□□□ -1.33
SCAF11-214ENST00000550893 HOXC9P31274 260 aa6.77□□□□□ -1.33
SCAF11-214ENST00000550893 BMP8BP34820 402 aa6.77□□□□□ -1.33
SCAF11-214ENST00000550893 SNX17Q15036 470 aa6.77□□□□□ -1.33
SCAF11-214ENST00000550893 PKN1Q16512 942 aa6.77□□□□□ -1.33
SCAF11-214ENST00000550893 SYDE1Q6ZW31 735 aaPredicted RBP6.77□□□□□ -1.33
SCAF11-214ENST00000550893 FBXO15Q8NCQ5 510 aaPredicted RBP6.77□□□□□ -1.33
SCAF11-214ENST00000550893 EPB41L4BQ9H329 900 aa6.77□□□□□ -1.33
SCAF11-214ENST00000550893 CWC22Q9HCG8 908 aaKnown RBP6.77□□□□□ -1.33
SCAF11-214ENST00000550893 GP6Q9HCN6 339 aa6.77□□□□□ -1.33
SCAF11-214ENST00000550893 DCP1AQ9NPI6 582 aaPredicted RBP6.77□□□□□ -1.33
SCAF11-214ENST00000550893 USP35Q9P2H5 1018 aa6.77□□□□□ -1.33
SCAF11-214ENST00000550893 INPP5FQ9Y2H2 1132 aa6.77□□□□□ -1.33
SCAF11-214ENST00000550893 YBX2Q9Y2T7 364 aaKnown RBP6.77□□□□□ -1.33
SCAF11-214ENST00000550893 ZNF451Q9Y4E5 1061 aa6.77□□□□□ -1.33
SCAF11-214ENST00000550893 ZNF831Q5JPB2 1677 aa6.77□□□□□ -1.33
SCAF11-214ENST00000550893 C4AP0C0L4 1744 aa6.76□□□□□ -1.33
SCAF11-214ENST00000550893 C4BP0C0L5 1744 aa6.76□□□□□ -1.33
SCAF11-214ENST00000550893 A0A1W2PQH9 124 aa6.76□□□□□ -1.33
SCAF11-214ENST00000550893 GSNP06396 782 aa6.76□□□□□ -1.33
SCAF11-214ENST00000550893 CD247P20963 164 aa6.76□□□□□ -1.33
SCAF11-214ENST00000550893 KIR2DL1P43626 348 aaPredicted RBP6.76□□□□□ -1.33
SCAF11-214ENST00000550893 KIR2DL2P43627 348 aaPredicted RBP6.76□□□□□ -1.33
SCAF11-214ENST00000550893 ZNF445P59923 1031 aa6.76□□□□□ -1.33
SCAF11-214ENST00000550893 RRS1Q15050 365 aaKnown RBP6.76□□□□□ -1.33
SCAF11-214ENST00000550893 SLC14A2Q15849 920 aa6.76□□□□□ -1.33
SCAF11-214ENST00000550893 NOL9Q5SY16 702 aaKnown RBP6.76□□□□□ -1.33
SCAF11-214ENST00000550893 CEP128Q6ZU80 1094 aa6.76□□□□□ -1.33
SCAF11-214ENST00000550893 SIRT2Q8IXJ6 389 aa6.76□□□□□ -1.33
SCAF11-214ENST00000550893 OR6P1Q8NGX9 317 aa6.76□□□□□ -1.33
SCAF11-214ENST00000550893 BRF1Q92994 677 aa6.76□□□□□ -1.33
SCAF11-214ENST00000550893 INTS4Q96HW7 963 aaKnown RBP6.76□□□□□ -1.33
SCAF11-214ENST00000550893 SHDQ96IW2 340 aa6.76□□□□□ -1.33
SCAF11-214ENST00000550893 SEC16BQ96JE7 1060 aa6.76□□□□□ -1.33
SCAF11-214ENST00000550893 FCRL2Q96LA5 508 aaPredicted RBP6.76□□□□□ -1.33
SCAF11-214ENST00000550893 CCSER2Q9H7U1 834 aa6.76□□□□□ -1.33
SCAF11-214ENST00000550893 THRAP3Q9Y2W1 955 aaKnown RBP6.76□□□□□ -1.33
SCAF11-214ENST00000550893 UBR2Q8IWV8 1755 aa6.76□□□□□ -1.33
SCAF11-214ENST00000550893 KIF7Q2M1P5 1343 aa6.76□□□□□ -1.33
SCAF11-214ENST00000550893 MYH14Q7Z406 1995 aaKnown RBP6.75□□□□□ -1.33
SCAF11-214ENST00000550893 INSRP06213 1382 aa6.75□□□□□ -1.33
SCAF11-214ENST00000550893 H0Y8X5 98 aa6.75□□□□□ -1.33
SCAF11-214ENST00000550893 NRDCO43847 1150 aa6.75□□□□□ -1.33
SCAF11-214ENST00000550893 JAG1P78504 1218 aa6.75□□□□□ -1.33
SCAF11-214ENST00000550893 EZH2Q15910 746 aaKnown RBP6.75□□□□□ -1.33
SCAF11-214ENST00000550893 NLRX1Q86UT6 975 aa6.75□□□□□ -1.33
SCAF11-214ENST00000550893 C19orf47Q8N9M1 422 aaKnown RBP6.75□□□□□ -1.33
SCAF11-214ENST00000550893 KCNH5Q8NCM2 988 aa6.75□□□□□ -1.33
SCAF11-214ENST00000550893 BHLHE22Q8NFJ8 381 aaPredicted RBP6.75□□□□□ -1.33
SCAF11-214ENST00000550893 CPLX3Q8WVH0 158 aa6.75□□□□□ -1.33
SCAF11-214ENST00000550893 IP6K1Q92551 441 aa6.75□□□□□ -1.33
SCAF11-214ENST00000550893 CDADC1Q9BWV3 514 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms