RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 STAT3P40763 770 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 ZNF157P51786 506 aaPredicted RBP9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 PRSS12P56730 875 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 RPS6P62753 249 aaKnown RBP9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 PABPC4Q13310 644 aaKnown RBP eCLIP9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 PLS1Q14651 629 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 SKOR2Q2VWA4 1001 aaPredicted RBP9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 TKFCQ3LXA3 575 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 SPECC1Q5M775 1068 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 MCTP2Q6DN12 878 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 CAVIN1Q6NZI2 390 aaKnown RBP9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 RIOX2Q8IUF8 465 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 CCAR1Q8IX12 1150 aaKnown RBP9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 FSIP1Q8NA03 581 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 ANKK1Q8NFD2 765 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 ENGASEQ8NFI3 743 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 SYTL5Q8TDW5 730 aaPredicted RBP9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 PAGR1Q9BTK6 254 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 SPATC1LQ9H0A9 340 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 TSKSQ9UJT2 592 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 SRPRBQ9Y5M8 271 aaKnown RBP9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 PCNTO95613 3336 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 DOCK5Q9H7D0 1870 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 WDR81Q562E7 1941 aa9.19□□□□□ -0.94
DEPDC4-207ENST00000549249 CYP3A7-CYP3A51PA0A087WV96 503 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 FAM237AA0A1B0GTK4 181 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 A0A1B0GVL5 298 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 GOLGA6L4A6NEF3 574 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 IGF2BP3O00425 579 aaKnown RBP eCLIP9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 NEMFO60524 1076 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 NR1I2O75469 434 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 CYP3A4P08684 503 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 GCFC2P16383 781 aaKnown RBP9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 CMA1P23946 247 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 CYP3A7P24462 503 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 CIITAP33076 1130 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 UBXN2AP68543 259 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 ORC2Q13416 577 aaPredicted RBP9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 SNW1Q13573 536 aaKnown RBP9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 BAATQ14032 418 aaPredicted RBP9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 Q3C1V9 767 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 RESP18Q5W5W9 173 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 ARL6IP4Q66PJ3 421 aaKnown RBP9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 PPP4R3AQ6IN85 833 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 MOXD1Q6UVY6 613 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 NSMFQ6X4W1 530 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 USP49Q70CQ1 688 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 MCF2L2Q86YR7 1114 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 SAMD3Q8N6K7 520 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 IL31RAQ8NI17 732 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 MRPS27Q92552 414 aaKnown RBP9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 LENG9Q96B70 501 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 MTMR9Q96QG7 549 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 PURBQ96QR8 312 aaKnown RBP9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 TAAR1Q96RJ0 339 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 MOV10L1Q9BXT6 1211 aaKnown RBP9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 CSRNP2Q9H175 543 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 ACAD9Q9H845 621 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 A1CFQ9NQ94 594 aaKnown RBP9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 PNMA3Q9UL41 463 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 HPSEQ9Y251 543 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 RABGAP1Q9Y3P9 1069 aa9.18□□□□□ -0.94
DEPDC4-207ENST00000549249 ASTN1O14525 1302 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 ADGRA2Q96PE1 1338 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 IGLV3-22A0A075B6J6 115 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 VWA3AA6NCI4 1184 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 MANSC4A6NHS7 340 aaPredicted RBP9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 FAM86B1E9PN63 330 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 LAD1O00515 517 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 FAM86B2P0C5J1 330 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 OR52Z1P0C646 297 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 PFKFB1P16118 471 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 PRPHP41219 470 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 USP11P51784 963 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 NDUFA8P51970 172 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 ERVK-9P63128 1117 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 ERVK-24P63145 666 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 NOGQ13253 232 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 RNF207Q6ZRF8 634 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 PACS2Q86VP3 889 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 FMR1NBQ8N0W7 255 aaPredicted RBP9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 CHST13Q8NET6 341 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 HAS1Q92839 578 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 GJA10Q969M2 543 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 FERMT2Q96AC1 680 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 ABHD8Q96I13 439 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 KCNMB3Q9NPA1 279 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 DACT1Q9NYF0 836 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 MAP3K20Q9NYL2 800 aaKnown RBP9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 CYP39A1Q9NYL5 469 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 DDX25Q9UHL0 483 aaKnown RBP9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 MGAMO43451 1857 aa9.17□□□□□ -0.94
DEPDC4-207ENST00000549249 A0A087X0B3 334 aa9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 ERCC3P19447 782 aa9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 EIF2AK2P19525 551 aaKnown RBP9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 FAM160A1Q05DH4 1040 aa9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 PGM5Q15124 567 aa9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 CALCRLQ16602 461 aa9.16□□□□□ -0.94
DEPDC4-207ENST00000549249 Q4G0T1 1027 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms