RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 SLURP2P0DP57 97 aa19.68■□□□□ 0.74
SCARB1-208ENST00000544327 TERF2Q15554 542 aa19.68■□□□□ 0.74
SCARB1-208ENST00000544327 KIAA1328Q86T90 577 aa19.68■□□□□ 0.74
SCARB1-208ENST00000544327 CEP63Q96MT8 703 aa19.68■□□□□ 0.74
SCARB1-208ENST00000544327 TSGA10Q9BZW7 698 aa19.68■□□□□ 0.74
SCARB1-208ENST00000544327 PANK4Q9NVE7 773 aa19.68■□□□□ 0.74
SCARB1-208ENST00000544327 PCDHA2Q9Y5H9 948 aa19.68■□□□□ 0.74
SCARB1-208ENST00000544327 PCDHAC2Q9Y5I4 1007 aa19.68■□□□□ 0.74
SCARB1-208ENST00000544327 SLX4Q8IY92 1834 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 USP17L15C9J2P7 530 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 USP17L13C9JLJ4 530 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 USP17L11C9JVI0 530 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 USP17L18D6R9N7 530 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 USP17L22D6RA61 530 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 USP17L17D6RBQ6 530 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 USP17L19D6RCP7 530 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 USP17L20D6RJB6 530 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 ENTPD3O75355 529 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 IPO7O95373 1038 aaKnown RBP19.67■□□□□ 0.74
SCARB1-208ENST00000544327 LCA5LO95447 670 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 ICA1Q05084 483 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 USP17L24Q0WX57 530 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 TCP10Q12799 353 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 FAM26FQ5R3K3 315 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 USP17L6PQ6QN14 398 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 TEX2Q8IWB9 1127 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 CCDC65Q8IXS2 484 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 ZC3H3Q8IXZ2 948 aaKnown RBP19.67■□□□□ 0.74
SCARB1-208ENST00000544327 AMNQ9BXJ7 453 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 TRIM34Q9BYJ4 488 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 FRMD3A2A2Y4 597 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 SASH3O75995 380 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 PLA2G4BP0C869 781 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 VAV2P52735 878 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 CACNB3P54284 484 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 FKBP3Q00688 224 aaKnown RBP19.67■□□□□ 0.74
SCARB1-208ENST00000544327 Q4G0T1 1027 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 BTNL9Q6UXG8 535 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 ZSWIM4Q9H7M6 989 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 STK24Q9Y6E0 443 aa19.67■□□□□ 0.74
SCARB1-208ENST00000544327 PITPNM2Q9BZ72 1349 aa19.66■□□□□ 0.74
SCARB1-208ENST00000544327 ANO9A1A5B4 782 aa19.66■□□□□ 0.74
SCARB1-208ENST00000544327 MARSP56192 900 aaKnown RBP19.66■□□□□ 0.74
SCARB1-208ENST00000544327 SHROOM1Q2M3G4 852 aaPredicted RBP19.66■□□□□ 0.74
SCARB1-208ENST00000544327 MSL3Q8N5Y2 521 aaKnown RBP19.66■□□□□ 0.74
SCARB1-208ENST00000544327 ETNPPLQ8TBG4 499 aa19.66■□□□□ 0.74
SCARB1-208ENST00000544327 FUT8Q9BYC5 575 aa19.66■□□□□ 0.74
SCARB1-208ENST00000544327 FAM196BA6NMK8 535 aa19.65■□□□□ 0.74
SCARB1-208ENST00000544327 F5H6K3 240 aa19.65■□□□□ 0.74
SCARB1-208ENST00000544327 H0YIN7 160 aa19.65■□□□□ 0.74
SCARB1-208ENST00000544327 KIF20AO95235 890 aa19.65■□□□□ 0.74
SCARB1-208ENST00000544327 GNA14O95837 355 aa19.65■□□□□ 0.74
SCARB1-208ENST00000544327 FOSP01100 380 aaPredicted RBP19.65■□□□□ 0.74
SCARB1-208ENST00000544327 ARHGAP4P98171 946 aa19.65■□□□□ 0.74
SCARB1-208ENST00000544327 KLRC3Q07444 240 aa19.65■□□□□ 0.74
SCARB1-208ENST00000544327 ABCB5Q2M3G0 1257 aa19.65■□□□□ 0.74
SCARB1-208ENST00000544327 HAUS3Q68CZ6 603 aa19.65■□□□□ 0.74
SCARB1-208ENST00000544327 GLIS3Q8NEA6 775 aa19.65■□□□□ 0.74
SCARB1-208ENST00000544327 KIAA1024Q9UPX6 916 aa19.65■□□□□ 0.74
SCARB1-208ENST00000544327 COL4A3BPQ9Y5P4 624 aa19.65■□□□□ 0.74
SCARB1-208ENST00000544327 RGPD3A6NKT7 1758 aaPredicted RBP19.65■□□□□ 0.74
SCARB1-208ENST00000544327 RGPD4Q7Z3J3 1758 aa19.65■□□□□ 0.74
SCARB1-208ENST00000544327 CYP11B2P19099 503 aa19.65■□□□□ 0.74
SCARB1-208ENST00000544327 SPIRE1Q08AE8 756 aa19.65■□□□□ 0.74
SCARB1-208ENST00000544327 LRRC41Q15345 812 aa19.65■□□□□ 0.74
SCARB1-208ENST00000544327 LONRF2Q1L5Z9 754 aa19.65■□□□□ 0.74
SCARB1-208ENST00000544327 BAP1Q92560 729 aa19.65■□□□□ 0.74
SCARB1-208ENST00000544327 GJA10Q969M2 543 aa19.65■□□□□ 0.74
SCARB1-208ENST00000544327 CCDC42Q96M95 316 aa19.65■□□□□ 0.74
SCARB1-208ENST00000544327 LACRTQ9GZZ8 138 aa19.65■□□□□ 0.74
SCARB1-208ENST00000544327 ATAD5Q96QE3 1844 aa19.65■□□□□ 0.74
SCARB1-208ENST00000544327 RCCD1A6NED2 376 aa19.64■□□□□ 0.73
SCARB1-208ENST00000544327 E9PMD0 336 aa19.64■□□□□ 0.73
SCARB1-208ENST00000544327 MAP2K7O14733 419 aa19.64■□□□□ 0.73
SCARB1-208ENST00000544327 EPHB6O15197 1021 aa19.64■□□□□ 0.73
SCARB1-208ENST00000544327 NDUFB10O96000 172 aa19.64■□□□□ 0.73
SCARB1-208ENST00000544327 APBA3O96018 575 aa19.64■□□□□ 0.73
SCARB1-208ENST00000544327 CIITAP33076 1130 aa19.64■□□□□ 0.73
SCARB1-208ENST00000544327 SREBF1P36956 1147 aa19.64■□□□□ 0.73
SCARB1-208ENST00000544327 RBM5P52756 815 aaKnown RBP eCLIP19.64■□□□□ 0.73
SCARB1-208ENST00000544327 SLC12A3P55017 1021 aa19.64■□□□□ 0.73
SCARB1-208ENST00000544327 SPA17Q15506 151 aa19.64■□□□□ 0.73
SCARB1-208ENST00000544327 SYDE2Q5VT97 1194 aa19.64■□□□□ 0.73
SCARB1-208ENST00000544327 FBXO11Q86XK2 927 aa19.64■□□□□ 0.73
SCARB1-208ENST00000544327 RPGRIP1Q96KN7 1286 aa19.64■□□□□ 0.73
SCARB1-208ENST00000544327 SAR1BQ9Y6B6 198 aa19.64■□□□□ 0.73
SCARB1-208ENST00000544327 PSME4Q14997 1843 aa19.64■□□□□ 0.73
SCARB1-208ENST00000544327 POTEB3A0JP26 581 aa19.63■□□□□ 0.73
SCARB1-208ENST00000544327 POTECB2RU33 542 aa19.63■□□□□ 0.73
SCARB1-208ENST00000544327 ZNF263O14978 683 aa19.63■□□□□ 0.73
SCARB1-208ENST00000544327 ERLIN1O75477 346 aa19.63■□□□□ 0.73
SCARB1-208ENST00000544327 BEND6Q5SZJ8 279 aaPredicted RBP19.63■□□□□ 0.73
SCARB1-208ENST00000544327 POTEBQ6S5H4 581 aa19.63■□□□□ 0.73
SCARB1-208ENST00000544327 PPP4R3CPQ6ZMV5 832 aa19.63■□□□□ 0.73
SCARB1-208ENST00000544327 GPBP1Q86WP2 473 aa19.63■□□□□ 0.73
SCARB1-208ENST00000544327 CNKSR1Q969H4 720 aa19.63■□□□□ 0.73
SCARB1-208ENST00000544327 LENG9Q96B70 501 aa19.63■□□□□ 0.73
SCARB1-208ENST00000544327 FAM20AQ96MK3 541 aa19.63■□□□□ 0.73
SCARB1-208ENST00000544327 PNKPQ96T60 521 aa19.63■□□□□ 0.73
SCARB1-208ENST00000544327 P2RX7Q99572 595 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms