RNA–Protein interactions for RNA: ENST00000543175.4

PTRH1-208, Transcript of peptidyl-tRNA hydrolase 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTRH1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTRH1-208ENST00000543175 HAS3O00219 553 aa27.35■■□□□ 1.97
PTRH1-208ENST00000543175 PLEKHA8P1O95397 391 aa27.35■■□□□ 1.97
PTRH1-208ENST00000543175 CALM1P0DP23 149 aa27.35■■□□□ 1.97
PTRH1-208ENST00000543175 CALM2P0DP24 149 aa27.35■■□□□ 1.97
PTRH1-208ENST00000543175 CALM3P0DP25 149 aa27.35■■□□□ 1.97
PTRH1-208ENST00000543175 ACTN1P12814 892 aa27.35■■□□□ 1.97
PTRH1-208ENST00000543175 MFSD10Q14728 455 aa27.35■■□□□ 1.97
PTRH1-208ENST00000543175 HSDL1Q3SXM5 330 aa27.35■■□□□ 1.97
PTRH1-208ENST00000543175 C7orf31Q8N865 590 aa27.35■■□□□ 1.97
PTRH1-208ENST00000543175 SPATA33Q96N06 139 aa27.35■■□□□ 1.97
PTRH1-208ENST00000543175 ALG1Q9BT22 464 aa27.35■■□□□ 1.97
PTRH1-208ENST00000543175 NKX2-4Q9H2Z4 354 aa27.35■■□□□ 1.97
PTRH1-208ENST00000543175 HDAC6Q9UBN7 1215 aa27.35■■□□□ 1.97
PTRH1-208ENST00000543175 YBX2Q9Y2T7 364 aaKnown RBP27.35■■□□□ 1.97
PTRH1-208ENST00000543175 SORBS3O60504 671 aa27.34■■□□□ 1.97
PTRH1-208ENST00000543175 PPFIA4O75335 1185 aa27.34■■□□□ 1.97
PTRH1-208ENST00000543175 STAM2O75886 525 aa27.34■■□□□ 1.97
PTRH1-208ENST00000543175 RXRAP19793 462 aa27.34■■□□□ 1.97
PTRH1-208ENST00000543175 SP2Q02086 613 aa27.34■■□□□ 1.97
PTRH1-208ENST00000543175 KIAA0753Q2KHM9 967 aa27.34■■□□□ 1.97
PTRH1-208ENST00000543175 GNPTABQ3T906 1256 aa27.34■■□□□ 1.97
PTRH1-208ENST00000543175 SRBD1Q8N5C6 995 aaKnown RBP27.34■■□□□ 1.97
PTRH1-208ENST00000543175 AFAP1L1Q8TED9 768 aa27.34■■□□□ 1.97
PTRH1-208ENST00000543175 GPKOWQ92917 476 aaPredicted RBP eCLIP27.34■■□□□ 1.97
PTRH1-208ENST00000543175 CDH23Q9H251 3354 aa27.34■■□□□ 1.97
PTRH1-208ENST00000543175 MYO9BQ13459 2157 aa27.33■■□□□ 1.97
PTRH1-208ENST00000543175 MRPS9P82933 396 aaKnown RBP27.33■■□□□ 1.97
PTRH1-208ENST00000543175 SMARCC2Q8TAQ2 1214 aa27.33■■□□□ 1.97
PTRH1-208ENST00000543175 INPP4AQ96PE3 977 aaPredicted RBP27.33■■□□□ 1.97
PTRH1-208ENST00000543175 SLC28A3Q9HAS3 691 aa27.33■■□□□ 1.97
PTRH1-208ENST00000543175 SLC12A7Q9Y666 1083 aa27.33■■□□□ 1.97
PTRH1-208ENST00000543175 ATP2A2P16615 1042 aaKnown RBP27.32■■□□□ 1.96
PTRH1-208ENST00000543175 RABGGTBP53611 331 aa27.32■■□□□ 1.96
PTRH1-208ENST00000543175 RBL2Q08999 1139 aa27.32■■□□□ 1.96
PTRH1-208ENST00000543175 RNF20Q5VTR2 975 aa27.32■■□□□ 1.96
PTRH1-208ENST00000543175 DHX38Q92620 1227 aaKnown RBP27.32■■□□□ 1.96
PTRH1-208ENST00000543175 CUL5Q93034 780 aa27.32■■□□□ 1.96
PTRH1-208ENST00000543175 GAS2L1Q99501 681 aaPredicted RBP27.32■■□□□ 1.96
PTRH1-208ENST00000543175 LRRC2Q9BYS8 371 aa27.32■■□□□ 1.96
PTRH1-208ENST00000543175 FTOQ9C0B1 505 aaKnown RBP eCLIP27.32■■□□□ 1.96
PTRH1-208ENST00000543175 PRDM12Q9H4Q4 367 aa27.32■■□□□ 1.96
PTRH1-208ENST00000543175 MLXIPQ9HAP2 919 aa27.32■■□□□ 1.96
PTRH1-208ENST00000543175 PCDHA11Q9Y5I1 949 aa27.32■■□□□ 1.96
PTRH1-208ENST00000543175 PIK3CDO00329 1044 aa27.31■■□□□ 1.96
PTRH1-208ENST00000543175 ICAM3P32942 547 aa27.31■■□□□ 1.96
PTRH1-208ENST00000543175 USP17L6PQ6QN14 398 aa27.31■■□□□ 1.96
PTRH1-208ENST00000543175 RAB11FIP4Q86YS3 637 aa27.31■■□□□ 1.96
PTRH1-208ENST00000543175 CMTR1Q8N1G2 835 aaKnown RBP27.31■■□□□ 1.96
PTRH1-208ENST00000543175 MEIS2O14770 477 aa27.3■■□□□ 1.96
PTRH1-208ENST00000543175 SELPP16109 830 aa27.3■■□□□ 1.96
PTRH1-208ENST00000543175 LRRC8DQ7L1W4 858 aa27.3■■□□□ 1.96
PTRH1-208ENST00000543175 SGMS1Q86VZ5 419 aa27.3■■□□□ 1.96
PTRH1-208ENST00000543175 SLC9A7Q96T83 725 aa27.3■■□□□ 1.96
PTRH1-208ENST00000543175 SPATA31C2B4DYI2 1134 aa27.29■■□□□ 1.96
PTRH1-208ENST00000543175 FIBPO43427 364 aa27.29■■□□□ 1.96
PTRH1-208ENST00000543175 PCNX4Q63HM2 1172 aa27.29■■□□□ 1.96
PTRH1-208ENST00000543175 C16orf70Q9BSU1 422 aa27.29■■□□□ 1.96
PTRH1-208ENST00000543175 RTEL1Q9NZ71 1219 aa27.29■■□□□ 1.96
PTRH1-208ENST00000543175 PARNO95453 639 aaKnown RBP27.28■■□□□ 1.96
PTRH1-208ENST00000543175 CKBP12277 381 aa27.28■■□□□ 1.96
PTRH1-208ENST00000543175 SEMA3FQ13275 785 aa27.28■■□□□ 1.96
PTRH1-208ENST00000543175 PTK7Q13308 1070 aa27.28■■□□□ 1.96
PTRH1-208ENST00000543175 NEDD9Q14511 834 aa27.28■■□□□ 1.96
PTRH1-208ENST00000543175 PPP2R2DQ66LE6 453 aa27.28■■□□□ 1.96
PTRH1-208ENST00000543175 XRRA1Q6P2D8 792 aa27.28■■□□□ 1.96
PTRH1-208ENST00000543175 TMTC3Q6ZXV5 915 aa27.28■■□□□ 1.96
PTRH1-208ENST00000543175 MICU3Q86XE3 530 aa27.28■■□□□ 1.96
PTRH1-208ENST00000543175 FANCBQ8NB91 859 aa27.28■■□□□ 1.96
PTRH1-208ENST00000543175 NEK1Q96PY6 1258 aa27.28■■□□□ 1.96
PTRH1-208ENST00000543175 BCAS3Q9H6U6 928 aa27.28■■□□□ 1.96
PTRH1-208ENST00000543175 CDC45O75419 566 aa27.27■■□□□ 1.96
PTRH1-208ENST00000543175 BAIAP3O94812 1187 aa27.27■■□□□ 1.96
PTRH1-208ENST00000543175 MYOGP15173 224 aa27.27■■□□□ 1.96
PTRH1-208ENST00000543175 METTL7BQ6UX53 244 aa27.27■■□□□ 1.96
PTRH1-208ENST00000543175 PHOSPHO2Q8TCD6 241 aa27.27■■□□□ 1.96
PTRH1-208ENST00000543175 NOP56O00567 594 aaKnown RBP27.26■■□□□ 1.95
PTRH1-208ENST00000543175 LGALS2P05162 132 aa27.26■■□□□ 1.95
PTRH1-208ENST00000543175 GPNMBQ14956 572 aa27.26■■□□□ 1.95
PTRH1-208ENST00000543175 SYNE3Q6ZMZ3 975 aa27.26■■□□□ 1.95
PTRH1-208ENST00000543175 CCDC82Q8N4S0 544 aa27.26■■□□□ 1.95
PTRH1-208ENST00000543175 USP38Q8NB14 1042 aa27.26■■□□□ 1.95
PTRH1-208ENST00000543175 COL25A1Q9BXS0 654 aaPredicted RBP27.26■■□□□ 1.95
PTRH1-208ENST00000543175 PSTPIP2Q9H939 334 aa27.26■■□□□ 1.95
PTRH1-208ENST00000543175 EYSQ5T1H1 3165 aa27.25■■□□□ 1.95
PTRH1-208ENST00000543175 UNC80Q8N2C7 3258 aa27.25■■□□□ 1.95
PTRH1-208ENST00000543175 hCG_1642624A0A1W2PR95 340 aa27.25■■□□□ 1.95
PTRH1-208ENST00000543175 H3BRB1 525 aa27.25■■□□□ 1.95
PTRH1-208ENST00000543175 ZNF200P98182 395 aaPredicted RBP27.25■■□□□ 1.95
PTRH1-208ENST00000543175 HIC1Q14526 733 aa27.25■■□□□ 1.95
PTRH1-208ENST00000543175 TRIM71Q2Q1W2 868 aaKnown RBP27.25■■□□□ 1.95
PTRH1-208ENST00000543175 APOA5Q6Q788 366 aa27.25■■□□□ 1.95
PTRH1-208ENST00000543175 CYFIP1Q7L576 1253 aa27.25■■□□□ 1.95
PTRH1-208ENST00000543175 WNT8BQ93098 351 aa27.25■■□□□ 1.95
PTRH1-208ENST00000543175 TUT1Q9H6E5 874 aaKnown RBP27.25■■□□□ 1.95
PTRH1-208ENST00000543175 KAT6AQ92794 2004 aa27.24■■□□□ 1.95
PTRH1-208ENST00000543175 CXCL10P02778 98 aa27.24■■□□□ 1.95
PTRH1-208ENST00000543175 ADGRE1Q14246 886 aa27.24■■□□□ 1.95
PTRH1-208ENST00000543175 TSGA10IPQ3SY00 556 aa27.24■■□□□ 1.95
PTRH1-208ENST00000543175 NLRX1Q86UT6 975 aa27.24■■□□□ 1.95
PTRH1-208ENST00000543175 CNTNAP5Q8WYK1 1306 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms