RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 FOCADQ5VW36 1801 aa16.41■□□□□ 0.22
DDX55-209ENST00000542286 PSMC6P62333 389 aa16.41■□□□□ 0.22
DDX55-209ENST00000542286 PAXIP1Q6ZW49 1069 aaPredicted RBP16.41■□□□□ 0.22
DDX55-209ENST00000542286 CCDC47Q96A33 483 aaKnown RBP16.41■□□□□ 0.22
DDX55-209ENST00000542286 PSMB7Q99436 277 aa16.41■□□□□ 0.22
DDX55-209ENST00000542286 TANGO6Q9C0B7 1094 aa16.41■□□□□ 0.22
DDX55-209ENST00000542286 AMPD3Q01432 767 aa16.4■□□□□ 0.22
DDX55-209ENST00000542286 UNC13DQ70J99 1090 aa16.4■□□□□ 0.22
DDX55-209ENST00000542286 KIAA1328Q86T90 577 aa16.4■□□□□ 0.22
DDX55-209ENST00000542286 CDAN1Q8IWY9 1227 aa16.4■□□□□ 0.22
DDX55-209ENST00000542286 NLGN1Q8N2Q7 840 aa16.4■□□□□ 0.22
DDX55-209ENST00000542286 CUEDC2Q9H467 287 aa16.4■□□□□ 0.22
DDX55-209ENST00000542286 COL11A2P13942 1736 aaPredicted RBP16.4■□□□□ 0.22
DDX55-209ENST00000542286 ZMYND10O75800 440 aa16.4■□□□□ 0.22
DDX55-209ENST00000542286 SMARCA1P28370 1054 aa16.4■□□□□ 0.22
DDX55-209ENST00000542286 GTF2A1P52655 376 aaPredicted RBP16.4■□□□□ 0.22
DDX55-209ENST00000542286 UBXN2AP68543 259 aa16.4■□□□□ 0.22
DDX55-209ENST00000542286 LONRF2Q1L5Z9 754 aa16.4■□□□□ 0.22
DDX55-209ENST00000542286 PRR16Q569H4 304 aa16.4■□□□□ 0.22
DDX55-209ENST00000542286 CENPPQ6IPU0 288 aa16.4■□□□□ 0.22
DDX55-209ENST00000542286 PDGFDQ9GZP0 370 aaPredicted RBP16.4■□□□□ 0.22
DDX55-209ENST00000542286 A0A1W2PQC6 194 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 CLRN2A0PK11 232 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 BICDL2A1A5D9 508 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 MED24O75448 989 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 MYL1P05976 194 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 CYP4A11Q02928 519 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 COASYQ13057 564 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 TRIM14Q14142 442 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 TSR1Q2NL82 804 aaKnown RBP16.39■□□□□ 0.21
DDX55-209ENST00000542286 DNAJC19Q96DA6 116 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 MASTLQ96GX5 879 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 IKZF4Q9H2S9 585 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 NLRC4Q9NPP4 1024 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 SWAP70Q9UH65 585 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 LRRC37AA6NMS7 1700 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 GH2P01242 217 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 MRPL12P52815 198 aaKnown RBP16.39■□□□□ 0.21
DDX55-209ENST00000542286 ICA1Q05084 483 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 ZYXQ15942 572 aaKnown RBP16.39■□□□□ 0.21
DDX55-209ENST00000542286 KCTD19Q17RG1 926 aaPredicted RBP16.39■□□□□ 0.21
DDX55-209ENST00000542286 DACT2Q5SW24 774 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 HHIPL2Q6UWX4 724 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 CCDC84Q86UT8 332 aaPredicted RBP16.39■□□□□ 0.21
DDX55-209ENST00000542286 RABGGTAQ92696 567 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 AKT1S1Q96B36 256 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 PRMT6Q96LA8 375 aaPredicted RBP16.39■□□□□ 0.21
DDX55-209ENST00000542286 GDAP1L1Q96MZ0 367 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 ANO3Q9BYT9 981 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 NDST4Q9H3R1 872 aa16.39■□□□□ 0.21
DDX55-209ENST00000542286 A0A1W2PRG0 241 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 F5H6K3 240 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 ALDH1B1P30837 517 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 ECE1P42892 770 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 KLRC3Q07444 240 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 ICE2Q659A1 982 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 LEKR1Q6ZMV7 388 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 TMC4Q7Z404 712 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 GOLGA6L1Q8N7Z2 621 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 TBC1D5Q92609 795 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 MLXIPQ9HAP2 919 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 SMARCAL1Q9NZC9 954 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 MEIS2O14770 477 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 TMEM119Q4V9L6 283 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 VWA3BQ502W6 1294 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 LRRC55Q6ZSA7 311 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 RRAGAQ7L523 313 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 DNAAF5Q86Y56 855 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 JAKMIP2Q96AA8 810 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 MMS19Q96T76 1030 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 TMX4Q9H1E5 349 aaPredicted RBP16.38■□□□□ 0.21
DDX55-209ENST00000542286 YY1AP1Q9H869 796 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 ARHGAP20Q9P2F6 1191 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 MYO6Q9UM54 1294 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 TCP10L2B9ZVM9 353 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 TRAF5O00463 557 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 NT5C2P49902 561 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 CASP5P51878 434 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 VSNL1P62760 191 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 AMPD2Q01433 879 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 KIAA1755Q5JYT7 1200 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 ZDHHC15Q96MV8 337 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 PANK4Q9NVE7 773 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 VPS18Q9P253 973 aa16.38■□□□□ 0.21
DDX55-209ENST00000542286 ATF5Q9Y2D1 282 aaPredicted RBP16.38■□□□□ 0.21
DDX55-209ENST00000542286 LRRC53A6NM62 1247 aa16.37■□□□□ 0.21
DDX55-209ENST00000542286 NDUFB10O96000 172 aa16.37■□□□□ 0.21
DDX55-209ENST00000542286 PDE6BP35913 854 aa16.37■□□□□ 0.21
DDX55-209ENST00000542286 ARID5AQ03989 594 aa16.37■□□□□ 0.21
DDX55-209ENST00000542286 PABPC4Q13310 644 aaKnown RBP eCLIP16.37■□□□□ 0.21
DDX55-209ENST00000542286 GPATCH4Q5T3I0 446 aaKnown RBP16.37■□□□□ 0.21
DDX55-209ENST00000542286 GPBP1Q86WP2 473 aa16.37■□□□□ 0.21
DDX55-209ENST00000542286 MAGEF1Q9HAY2 307 aa16.37■□□□□ 0.21
DDX55-209ENST00000542286 NRXN2Q9P2S2 1712 aa16.37■□□□□ 0.21
DDX55-209ENST00000542286 MYH10P35580 1976 aa16.37■□□□□ 0.21
DDX55-209ENST00000542286 FAM86B1E9PN63 330 aa16.37■□□□□ 0.21
DDX55-209ENST00000542286 FAM86B2P0C5J1 330 aa16.37■□□□□ 0.21
DDX55-209ENST00000542286 FKBP15Q5T1M5 1219 aa16.37■□□□□ 0.21
DDX55-209ENST00000542286 PPP4R3AQ6IN85 833 aa16.37■□□□□ 0.21
DDX55-209ENST00000542286 EHD2Q9NZN4 543 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms