RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 MOB2Q70IA6 237 aa17.08■□□□□ 0.33
CLPTM1-202ENST00000541297 MNS1Q8NEH6 495 aa17.08■□□□□ 0.33
CLPTM1-202ENST00000541297 ATG4CQ96DT6 458 aa17.08■□□□□ 0.33
CLPTM1-202ENST00000541297 PCDHA12Q9UN75 941 aa17.08■□□□□ 0.33
CLPTM1-202ENST00000541297 CTDP1Q9Y5B0 961 aaPredicted RBP17.08■□□□□ 0.33
CLPTM1-202ENST00000541297 SNCAIPQ9Y6H5 919 aa17.08■□□□□ 0.33
CLPTM1-202ENST00000541297 RLFQ13129 1914 aa17.08■□□□□ 0.33
CLPTM1-202ENST00000541297 GLTPD2A6NH11 291 aa17.08■□□□□ 0.32
CLPTM1-202ENST00000541297 IKBKBO14920 756 aa17.08■□□□□ 0.32
CLPTM1-202ENST00000541297 PPP1R12BO60237 982 aaPredicted RBP17.08■□□□□ 0.32
CLPTM1-202ENST00000541297 CREBRFQ8IUR6 639 aa17.08■□□□□ 0.32
CLPTM1-202ENST00000541297 NUDT12Q9BQG2 462 aa17.08■□□□□ 0.32
CLPTM1-202ENST00000541297 CARD6Q9BX69 1037 aa17.08■□□□□ 0.32
CLPTM1-202ENST00000541297 ARGLU1Q9NWB6 273 aaPredicted RBP17.08■□□□□ 0.32
CLPTM1-202ENST00000541297 AFG3L2Q9Y4W6 797 aa17.08■□□□□ 0.32
CLPTM1-202ENST00000541297 CCP110O43303 1012 aa17.07■□□□□ 0.32
CLPTM1-202ENST00000541297 SEC31AO94979 1220 aaKnown RBP17.07■□□□□ 0.32
CLPTM1-202ENST00000541297 SERPINC1P01008 464 aa17.07■□□□□ 0.32
CLPTM1-202ENST00000541297 ZNF76P36508 570 aa17.07■□□□□ 0.32
CLPTM1-202ENST00000541297 MAP3K9P80192 1104 aa17.07■□□□□ 0.32
CLPTM1-202ENST00000541297 NOL9Q5SY16 702 aaKnown RBP17.07■□□□□ 0.32
CLPTM1-202ENST00000541297 MCTP2Q6DN12 878 aa17.07■□□□□ 0.32
CLPTM1-202ENST00000541297 USP50Q70EL3 339 aaPredicted RBP17.07■□□□□ 0.32
CLPTM1-202ENST00000541297 REXO1L1PQ8IX06 675 aa17.07■□□□□ 0.32
CLPTM1-202ENST00000541297 SMYD4Q8IYR2 804 aaPredicted RBP17.07■□□□□ 0.32
CLPTM1-202ENST00000541297 NAP1L4Q99733 375 aaKnown RBP17.07■□□□□ 0.32
CLPTM1-202ENST00000541297 RAB34Q9BZG1 259 aa17.07■□□□□ 0.32
CLPTM1-202ENST00000541297 PTPRFP10586 1907 aa17.07■□□□□ 0.32
CLPTM1-202ENST00000541297 CYP3A7-CYP3A51PA0A087WV96 503 aa17.07■□□□□ 0.32
CLPTM1-202ENST00000541297 CYP3A7P24462 503 aa17.07■□□□□ 0.32
CLPTM1-202ENST00000541297 CALML4Q96GE6 196 aa17.07■□□□□ 0.32
CLPTM1-202ENST00000541297 EPC1Q9H2F5 836 aa17.07■□□□□ 0.32
CLPTM1-202ENST00000541297 TMX1Q9H3N1 280 aa17.07■□□□□ 0.32
CLPTM1-202ENST00000541297 VWA5AO00534 786 aa17.06■□□□□ 0.32
CLPTM1-202ENST00000541297 POLR3GO15318 223 aaPredicted RBP17.06■□□□□ 0.32
CLPTM1-202ENST00000541297 TADA3O75528 432 aa17.06■□□□□ 0.32
CLPTM1-202ENST00000541297 TTLL12Q14166 644 aaPredicted RBP17.06■□□□□ 0.32
CLPTM1-202ENST00000541297 MUM1L1Q5H9M0 696 aa17.06■□□□□ 0.32
CLPTM1-202ENST00000541297 SNX29Q8TEQ0 813 aa17.06■□□□□ 0.32
CLPTM1-202ENST00000541297 LENG9Q96B70 501 aa17.06■□□□□ 0.32
CLPTM1-202ENST00000541297 CDCA5Q96FF9 252 aa17.06■□□□□ 0.32
CLPTM1-202ENST00000541297 KCNMB3Q9NPA1 279 aa17.06■□□□□ 0.32
CLPTM1-202ENST00000541297 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.06■□□□□ 0.32
CLPTM1-202ENST00000541297 CSADQ9Y600 493 aa17.06■□□□□ 0.32
CLPTM1-202ENST00000541297 TMOD4Q9NZQ9 345 aa17.06■□□□□ 0.32
CLPTM1-202ENST00000541297 PAPPA2Q9BXP8 1791 aa17.06■□□□□ 0.32
CLPTM1-202ENST00000541297 C19orf81C9J6K1 198 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 GTPBP6O43824 516 aaPredicted RBP17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 ZBED4O75132 1171 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 STAT3P40763 770 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 HNRNPH2P55795 449 aaKnown RBP17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 GRB10Q13322 594 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 PDIA5Q14554 519 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 CLEC4DQ8WXI8 215 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 CDK5RAP3Q96JB5 506 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 CLMNQ96JQ2 1002 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 MBOAT7Q96N66 472 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 GSDMAQ96QA5 445 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 ELP3Q9H9T3 547 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 KRT79Q5XKE5 535 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 MOXD1Q6UVY6 613 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 TRMT44Q8IYL2 757 aaKnown RBP17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 TRIML1Q8N9V2 468 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 ETNPPLQ8TBG4 499 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 TAF1DQ9H5J8 278 aaPredicted RBP17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 COL20A1Q9P218 1284 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 SCN4AP35499 1836 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 RBBP6Q7Z6E9 1792 aaKnown RBP17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 EFCAB8A8MWE9 144 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 GRIN3BO60391 1043 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 FMR1Q06787 632 aaKnown RBP eCLIP17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 Q4G0T1 1027 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 HSP90AA4PQ58FG1 418 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 KLHL10Q6JEL2 608 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 SLC30A10Q6XR72 485 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 C12orf42Q96LP6 360 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 PNMA5Q96PV4 448 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 SRRTQ9BXP5 876 aaKnown RBP17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 RIPK3Q9Y572 518 aa17.05■□□□□ 0.32
CLPTM1-202ENST00000541297 IREB2P48200 963 aaKnown RBP17.04■□□□□ 0.32
CLPTM1-202ENST00000541297 MYL5Q02045 173 aa17.04■□□□□ 0.32
CLPTM1-202ENST00000541297 ECM1Q16610 540 aa17.04■□□□□ 0.32
CLPTM1-202ENST00000541297 VSTM4Q8IW00 320 aa17.04■□□□□ 0.32
CLPTM1-202ENST00000541297 MLKLQ8NB16 471 aa17.04■□□□□ 0.32
CLPTM1-202ENST00000541297 KBTBD4Q9NVX7 518 aa17.04■□□□□ 0.32
CLPTM1-202ENST00000541297 POTECB2RU33 542 aa17.04■□□□□ 0.32
CLPTM1-202ENST00000541297 MSH4O15457 936 aa17.04■□□□□ 0.32
CLPTM1-202ENST00000541297 CBFA2T2O43439 604 aa17.04■□□□□ 0.32
CLPTM1-202ENST00000541297 RPN1P04843 607 aaKnown RBP17.04■□□□□ 0.32
CLPTM1-202ENST00000541297 POTEIP0CG38 1075 aa17.04■□□□□ 0.32
CLPTM1-202ENST00000541297 POTEJP0CG39 1038 aa17.04■□□□□ 0.32
CLPTM1-202ENST00000541297 CD44P16070 742 aaKnown RBP17.04■□□□□ 0.32
CLPTM1-202ENST00000541297 OTUD5Q96G74 571 aa17.04■□□□□ 0.32
CLPTM1-202ENST00000541297 TRERF1Q96PN7 1200 aa17.04■□□□□ 0.32
CLPTM1-202ENST00000541297 CYP3A4P08684 503 aa17.03■□□□□ 0.32
CLPTM1-202ENST00000541297 CIITAP33076 1130 aa17.03■□□□□ 0.32
CLPTM1-202ENST00000541297 HSD17B4P51659 736 aa17.03■□□□□ 0.32
CLPTM1-202ENST00000541297 SLFN12Q8IYM2 578 aa17.03■□□□□ 0.32
CLPTM1-202ENST00000541297 SASH3O75995 380 aa17.03■□□□□ 0.32
CLPTM1-202ENST00000541297 NF2P35240 595 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms